RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, human

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GBP3-208	ENST00000493594	FAM50A	Q14320	339 aa	Known RBP	11.69	□□□□□ -0.54
GBP3-208	ENST00000493594	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
GBP3-208	ENST00000493594	SETD5	Q9C0A6	1442 aa		11.67	□□□□□ -0.54
GBP3-208	ENST00000493594	PRX	Q9BXM0	1461 aa		11.66	□□□□□ -0.54
GBP3-208	ENST00000493594	DEK	P35659	375 aa	Known RBP	11.64	□□□□□ -0.55
GBP3-208	ENST00000493594	UNC13A	Q9UPW8	1703 aa		11.63	□□□□□ -0.55
GBP3-208	ENST00000493594	ERICH3	Q5RHP9	1530 aa		11.62	□□□□□ -0.55
GBP3-208	ENST00000493594	ARHGAP35	Q9NRY4	1499 aa		11.61	□□□□□ -0.55
GBP3-208	ENST00000493594	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.61	□□□□□ -0.55
GBP3-208	ENST00000493594	TOP2B	Q02880	1626 aa		11.6	□□□□□ -0.55
GBP3-208	ENST00000493594	NBR1	Q14596	966 aa		11.59	□□□□□ -0.55
GBP3-208	ENST00000493594	TIMELESS	Q9UNS1	1208 aa		11.59	□□□□□ -0.55
GBP3-208	ENST00000493594	PRKCSH	P14314	528 aa	Predicted RBP	11.58	□□□□□ -0.56
GBP3-208	ENST00000493594	B4GALNT3	Q6L9W6	998 aa		11.58	□□□□□ -0.56
GBP3-208	ENST00000493594	PHLDB1	Q86UU1	1377 aa		11.58	□□□□□ -0.56
GBP3-208	ENST00000493594	PPP4R2	Q9NY27	417 aa		11.57	□□□□□ -0.56
GBP3-208	ENST00000493594	TONSL	Q96HA7	1378 aa		11.56	□□□□□ -0.56
GBP3-208	ENST00000493594	ATAD2B	Q9ULI0	1458 aa		11.56	□□□□□ -0.56
GBP3-208	ENST00000493594	PEG3	Q9GZU2	1588 aa		11.56	□□□□□ -0.56
GBP3-208	ENST00000493594	P3H3	Q8IVL6	736 aa		11.55	□□□□□ -0.56
GBP3-208	ENST00000493594	MYT1L	Q9UL68	1186 aa		11.54	□□□□□ -0.56
GBP3-208	ENST00000493594	KIF27	Q86VH2	1401 aa		11.54	□□□□□ -0.56
GBP3-208	ENST00000493594	PAK3	O75914	559 aa	Predicted RBP	11.53	□□□□□ -0.56
GBP3-208	ENST00000493594	CCDC184	Q52MB2	194 aa		11.53	□□□□□ -0.56
GBP3-208	ENST00000493594	FAM9B	Q8IZU0	186 aa		11.52	□□□□□ -0.57
GBP3-208	ENST00000493594	NOP58	Q9Y2X3	529 aa	Known RBP	11.51	□□□□□ -0.57
GBP3-208	ENST00000493594	LRRC9	Q6ZRR7	1453 aa		11.51	□□□□□ -0.57
GBP3-208	ENST00000493594	TIAM1	Q13009	1591 aa		11.51	□□□□□ -0.57
GBP3-208	ENST00000493594	BIVM-ERCC5	R4GMW8	1640 aa		11.5	□□□□□ -0.57
GBP3-208	ENST00000493594	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.49	□□□□□ -0.57
GBP3-208	ENST00000493594	BICRA	Q9NZM4	1560 aa		11.49	□□□□□ -0.57
GBP3-208	ENST00000493594	ERICH6B	Q5W0A0	696 aa		11.49	□□□□□ -0.57
GBP3-208	ENST00000493594	WASHC2A	Q641Q2	1341 aa		11.47	□□□□□ -0.57
GBP3-208	ENST00000493594	CUX1	P39880	1505 aa		11.46	□□□□□ -0.57
GBP3-208	ENST00000493594	HSPA5	P11021	654 aa	Known RBP	11.45	□□□□□ -0.58
GBP3-208	ENST00000493594	MRS2	Q9HD23	443 aa		11.44	□□□□□ -0.58
GBP3-208	ENST00000493594	CNGB1	Q14028	1251 aa	Predicted RBP	11.43	□□□□□ -0.58
GBP3-208	ENST00000493594	MAP3K1	Q13233	1512 aa		11.43	□□□□□ -0.58
GBP3-208	ENST00000493594	IGF1R	P08069	1367 aa		11.42	□□□□□ -0.58
GBP3-208	ENST00000493594	SENP3-EIF4A1	A0A087X0R7	540 aa		11.41	□□□□□ -0.58
GBP3-208	ENST00000493594	RTL5	Q5HYW3	569 aa	Predicted RBP	11.41	□□□□□ -0.58
GBP3-208	ENST00000493594	SALL2	Q9Y467	1007 aa	Predicted RBP	11.4	□□□□□ -0.58
GBP3-208	ENST00000493594	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.4	□□□□□ -0.58
GBP3-208	ENST00000493594	RTN4	Q9NQC3	1192 aa	Known RBP	11.4	□□□□□ -0.58
GBP3-208	ENST00000493594	CCDC18	Q5T9S5	1454 aa		11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	C11orf95	C9JLR9	678 aa	Predicted RBP	11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	ANP32A	P39687	249 aa	Known RBP	11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	FHAD1	B1AJZ9	1412 aa		11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	CARMIL1	Q5VZK9	1371 aa		11.39	□□□□□ -0.59
GBP3-208	ENST00000493594	IPO9	Q96P70	1041 aa	Known RBP	11.38	□□□□□ -0.59
GBP3-208	ENST00000493594	ZBED9	Q6R2W3	1325 aa		11.38	□□□□□ -0.59
GBP3-208	ENST00000493594	IL27	Q8NEV9	243 aa		11.38	□□□□□ -0.59
GBP3-208	ENST00000493594	CCDC136	Q96JN2	1154 aa		11.38	□□□□□ -0.59
GBP3-208	ENST00000493594	PTPRK	Q15262	1439 aa		11.36	□□□□□ -0.59
GBP3-208	ENST00000493594	UACA	Q9BZF9	1416 aa		11.36	□□□□□ -0.59
GBP3-208	ENST00000493594	FHOD3	Q2V2M9	1422 aa		11.35	□□□□□ -0.59
GBP3-208	ENST00000493594	PCF11	O94913	1555 aa	Known RBP	11.35	□□□□□ -0.59
GBP3-208	ENST00000493594	AQR	O60306	1485 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
GBP3-208	ENST00000493594	AKNA	Q7Z591	1439 aa		11.35	□□□□□ -0.59
GBP3-208	ENST00000493594	CNTLN	Q9NXG0	1405 aa		11.34	□□□□□ -0.59
GBP3-208	ENST00000493594	NPM2	Q86SE8	214 aa	Known RBP	11.34	□□□□□ -0.59
GBP3-208	ENST00000493594	RRP7BP	Q9NSQ0	103 aa		11.34	□□□□□ -0.59
GBP3-208	ENST00000493594	CHIC2	Q9UKJ5	165 aa		11.34	□□□□□ -0.59
GBP3-208	ENST00000493594	FGD6	Q6ZV73	1430 aa		11.33	□□□□□ -0.6
GBP3-208	ENST00000493594	KDM5B	Q9UGL1	1544 aa		11.32	□□□□□ -0.6
GBP3-208	ENST00000493594	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
GBP3-208	ENST00000493594	HFM1	A2PYH4	1435 aa		11.31	□□□□□ -0.6
GBP3-208	ENST00000493594	FOXD1	Q16676	465 aa		11.31	□□□□□ -0.6
GBP3-208	ENST00000493594	L3MBTL2	Q969R5	705 aa		11.31	□□□□□ -0.6
GBP3-208	ENST00000493594	CFAP43	Q8NDM7	1665 aa		11.31	□□□□□ -0.6
GBP3-208	ENST00000493594	NAIP	Q13075	1403 aa		11.3	□□□□□ -0.6
GBP3-208	ENST00000493594	CCDC7	Q96M83	1385 aa		11.3	□□□□□ -0.6
GBP3-208	ENST00000493594	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.3	□□□□□ -0.6
GBP3-208	ENST00000493594	LAS1L	Q9Y4W2	734 aa	Known RBP	11.3	□□□□□ -0.6
GBP3-208	ENST00000493594	MTUS2	Q5JR59	1369 aa		11.29	□□□□□ -0.6
GBP3-208	ENST00000493594	POLR3GL	Q9BT43	218 aa		11.29	□□□□□ -0.6
GBP3-208	ENST00000493594	PTPN23	Q9H3S7	1636 aa		11.29	□□□□□ -0.6
GBP3-208	ENST00000493594	NCOA2	Q15596	1464 aa		11.28	□□□□□ -0.6
GBP3-208	ENST00000493594	NUDC	Q9Y266	331 aa		11.28	□□□□□ -0.6
GBP3-208	ENST00000493594	NEFM	P07197	916 aa		11.27	□□□□□ -0.6
GBP3-208	ENST00000493594	FMN1	Q68DA7	1419 aa		11.27	□□□□□ -0.61
GBP3-208	ENST00000493594	CFTR	P13569	1480 aa		11.26	□□□□□ -0.61
GBP3-208	ENST00000493594	KIF7	Q2M1P5	1343 aa		11.26	□□□□□ -0.61
GBP3-208	ENST00000493594	CASKIN1	Q8WXD9	1431 aa		11.26	□□□□□ -0.61
GBP3-208	ENST00000493594	NBPF8	Q3BBV2	869 aa		11.25	□□□□□ -0.61
GBP3-208	ENST00000493594	NCOA1	Q15788	1441 aa		11.25	□□□□□ -0.61
GBP3-208	ENST00000493594	SMG6	Q86US8	1419 aa	Known RBP	11.25	□□□□□ -0.61
GBP3-208	ENST00000493594	FYCO1	Q9BQS8	1478 aa		11.25	□□□□□ -0.61
GBP3-208	ENST00000493594	MPHOSPH9	Q99550	1183 aa		11.24	□□□□□ -0.61
GBP3-208	ENST00000493594	FGD5	Q6ZNL6	1462 aa		11.24	□□□□□ -0.61
GBP3-208	ENST00000493594	RNF123	Q5XPI4	1314 aa		11.22	□□□□□ -0.61
GBP3-208	ENST00000493594	DENND4B	O75064	1496 aa	Predicted RBP	11.21	□□□□□ -0.61
GBP3-208	ENST00000493594	NCAPD3	P42695	1498 aa		11.2	□□□□□ -0.62
GBP3-208	ENST00000493594	PDE4A	P27815	886 aa		11.2	□□□□□ -0.62
GBP3-208	ENST00000493594	EXOC6	Q8TAG9	804 aa		11.2	□□□□□ -0.62
GBP3-208	ENST00000493594	MYOM3	Q5VTT5	1437 aa		11.2	□□□□□ -0.62
GBP3-208	ENST00000493594	TMC1	Q8TDI8	760 aa		11.18	□□□□□ -0.62
GBP3-208	ENST00000493594	ZNF326	Q5BKZ1	582 aa	Known RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms