RNA–Protein interactions for RNA: ENST00000493213.1

CDK16-207, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-207ENST00000493213 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
CDK16-207ENST00000493213 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
CDK16-207ENST00000493213 TRHP20396 242 aaPredicted RBP18.62■□□□□ 0.57
CDK16-207ENST00000493213 GRIN2AQ12879 1464 aa18.61■□□□□ 0.57
CDK16-207ENST00000493213 ERICH3Q5RHP9 1530 aa18.59■□□□□ 0.57
CDK16-207ENST00000493213 FHAD1B1AJZ9 1412 aa18.59■□□□□ 0.57
CDK16-207ENST00000493213 NUP160Q12769 1436 aa18.58■□□□□ 0.57
CDK16-207ENST00000493213 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
CDK16-207ENST00000493213 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
CDK16-207ENST00000493213 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
CDK16-207ENST00000493213 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
CDK16-207ENST00000493213 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
CDK16-207ENST00000493213 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
CDK16-207ENST00000493213 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
CDK16-207ENST00000493213 JPH4Q96JJ6 628 aa18.38■□□□□ 0.53
CDK16-207ENST00000493213 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
CDK16-207ENST00000493213 PRG4Q92954 1404 aaPredicted RBP18.35■□□□□ 0.53
CDK16-207ENST00000493213 IGF1RP08069 1367 aa18.34■□□□□ 0.53
CDK16-207ENST00000493213 HOXD11P31277 338 aaPredicted RBP18.33■□□□□ 0.52
CDK16-207ENST00000493213 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
CDK16-207ENST00000493213 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
CDK16-207ENST00000493213 KIAA0586Q9BVV6 1533 aa18.3■□□□□ 0.52
CDK16-207ENST00000493213 CUL7Q14999 1698 aa18.3■□□□□ 0.52
CDK16-207ENST00000493213 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
CDK16-207ENST00000493213 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
CDK16-207ENST00000493213 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDK16-207ENST00000493213 MAPKBP1O60336 1514 aa18.17■□□□□ 0.5
CDK16-207ENST00000493213 ABCC10Q5T3U5 1492 aa18.14■□□□□ 0.49
CDK16-207ENST00000493213 CARMIL2Q6F5E8 1435 aa18.13■□□□□ 0.49
CDK16-207ENST00000493213 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
CDK16-207ENST00000493213 ADCY10Q96PN6 1610 aa18.1■□□□□ 0.49
CDK16-207ENST00000493213 PTPRGP23470 1445 aa18.09■□□□□ 0.49
CDK16-207ENST00000493213 TNIKQ9UKE5 1360 aa18.08■□□□□ 0.49
CDK16-207ENST00000493213 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
CDK16-207ENST00000493213 NPM3O75607 178 aaKnown RBP18.07■□□□□ 0.48
CDK16-207ENST00000493213 FAM69CQ0P6D2 419 aa18.07■□□□□ 0.48
CDK16-207ENST00000493213 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
CDK16-207ENST00000493213 RAPGEF2Q9Y4G8 1499 aa18.05■□□□□ 0.48
CDK16-207ENST00000493213 DIP2BQ9P265 1576 aa18.04■□□□□ 0.48
CDK16-207ENST00000493213 KCNA4P22459 653 aa18.03■□□□□ 0.48
CDK16-207ENST00000493213 UHRF1BP1LA0JNW5 1464 aa18.02■□□□□ 0.48
CDK16-207ENST00000493213 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
CDK16-207ENST00000493213 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
CDK16-207ENST00000493213 DISP1Q96F81 1524 aa17.98■□□□□ 0.47
CDK16-207ENST00000493213 PLB1Q6P1J6 1458 aa17.97■□□□□ 0.47
CDK16-207ENST00000493213 UACAQ9BZF9 1416 aa17.97■□□□□ 0.47
CDK16-207ENST00000493213 GLI2P10070 1586 aa17.92■□□□□ 0.46
CDK16-207ENST00000493213 KDM5BQ9UGL1 1544 aa17.91■□□□□ 0.46
CDK16-207ENST00000493213 ASXL2Q76L83 1435 aa17.9■□□□□ 0.46
CDK16-207ENST00000493213 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
CDK16-207ENST00000493213 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
CDK16-207ENST00000493213 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
CDK16-207ENST00000493213 KDM6BO15054 1643 aa17.87■□□□□ 0.45
CDK16-207ENST00000493213 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
CDK16-207ENST00000493213 TTBK1Q5TCY1 1321 aaPredicted RBP17.84■□□□□ 0.45
CDK16-207ENST00000493213 CTTNBP2Q8WZ74 1663 aa17.83■□□□□ 0.44
CDK16-207ENST00000493213 EPRSP07814 1512 aaKnown RBP17.82■□□□□ 0.44
CDK16-207ENST00000493213 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
CDK16-207ENST00000493213 FAM9AQ8IZU1 332 aaPredicted RBP17.79■□□□□ 0.44
CDK16-207ENST00000493213 TEX14Q8IWB6 1497 aa17.78■□□□□ 0.44
CDK16-207ENST00000493213 ZCCHC11Q5TAX3 1644 aaKnown RBP17.78■□□□□ 0.44
CDK16-207ENST00000493213 PPRC1Q5VV67 1664 aaKnown RBP17.76■□□□□ 0.43
CDK16-207ENST00000493213 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
CDK16-207ENST00000493213 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
CDK16-207ENST00000493213 ABCA8O94911 1581 aa17.74■□□□□ 0.43
CDK16-207ENST00000493213 EEA1Q15075 1411 aa17.74■□□□□ 0.43
CDK16-207ENST00000493213 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
CDK16-207ENST00000493213 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
CDK16-207ENST00000493213 MAGI3Q5TCQ9 1506 aa17.68■□□□□ 0.42
CDK16-207ENST00000493213 CFAP43Q8NDM7 1665 aa17.65■□□□□ 0.42
CDK16-207ENST00000493213 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
CDK16-207ENST00000493213 CD109Q6YHK3 1445 aa17.64■□□□□ 0.42
CDK16-207ENST00000493213 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
CDK16-207ENST00000493213 PHLDB1Q86UU1 1377 aa17.61■□□□□ 0.41
CDK16-207ENST00000493213 ATP10BO94823 1461 aa17.6■□□□□ 0.41
CDK16-207ENST00000493213 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
CDK16-207ENST00000493213 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
CDK16-207ENST00000493213 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
CDK16-207ENST00000493213 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
CDK16-207ENST00000493213 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
CDK16-207ENST00000493213 RAPGEF6Q8TEU7 1601 aa17.53■□□□□ 0.4
CDK16-207ENST00000493213 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
CDK16-207ENST00000493213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDK16-207ENST00000493213 KIF21BO75037 1637 aa17.5■□□□□ 0.39
CDK16-207ENST00000493213 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
CDK16-207ENST00000493213 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
CDK16-207ENST00000493213 NEO1Q92859 1461 aa17.48■□□□□ 0.39
CDK16-207ENST00000493213 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
CDK16-207ENST00000493213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
CDK16-207ENST00000493213 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
CDK16-207ENST00000493213 FHOD3Q2V2M9 1422 aa17.43■□□□□ 0.38
CDK16-207ENST00000493213 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
CDK16-207ENST00000493213 HECW2Q9P2P5 1572 aa17.41■□□□□ 0.38
CDK16-207ENST00000493213 FMN1Q68DA7 1419 aa17.36■□□□□ 0.37
CDK16-207ENST00000493213 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
CDK16-207ENST00000493213 CFAP74Q9C0B2 1584 aa17.33■□□□□ 0.37
CDK16-207ENST00000493213 RAPGEF3O95398 923 aa17.33■□□□□ 0.36
CDK16-207ENST00000493213 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
CDK16-207ENST00000493213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDK16-207ENST00000493213 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms