RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 RUSC2Q8N2Y8 1516 aa24.39■■□□□ 1.49
SAMM50-204ENST00000493161 IGF1RP08069 1367 aa24.28■■□□□ 1.48
SAMM50-204ENST00000493161 FAM69CQ0P6D2 419 aa24.27■■□□□ 1.48
SAMM50-204ENST00000493161 ADCY10Q96PN6 1610 aa24.26■■□□□ 1.47
SAMM50-204ENST00000493161 ABCC10Q5T3U5 1492 aa24.26■■□□□ 1.47
SAMM50-204ENST00000493161 NPM1P06748 294 aaKnown RBP eCLIP24.23■■□□□ 1.47
SAMM50-204ENST00000493161 KIAA0586Q9BVV6 1533 aa24.23■■□□□ 1.47
SAMM50-204ENST00000493161 MAPKBP1O60336 1514 aa24.22■■□□□ 1.47
SAMM50-204ENST00000493161 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
SAMM50-204ENST00000493161 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
SAMM50-204ENST00000493161 CUL7Q14999 1698 aa24.16■■□□□ 1.46
SAMM50-204ENST00000493161 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
SAMM50-204ENST00000493161 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
SAMM50-204ENST00000493161 PTPRGP23470 1445 aa24.07■■□□□ 1.44
SAMM50-204ENST00000493161 TSPOAP1O95153 1857 aa24.04■■□□□ 1.44
SAMM50-204ENST00000493161 KDM6BO15054 1643 aa24.02■■□□□ 1.44
SAMM50-204ENST00000493161 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
SAMM50-204ENST00000493161 KDM4FA0A1W2PPD8 638 aa23.97■■□□□ 1.43
SAMM50-204ENST00000493161 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
SAMM50-204ENST00000493161 ABCC2Q92887 1545 aa23.96■■□□□ 1.43
SAMM50-204ENST00000493161 CARMIL2Q6F5E8 1435 aa23.96■■□□□ 1.43
SAMM50-204ENST00000493161 ASXL2Q76L83 1435 aa23.93■■□□□ 1.42
SAMM50-204ENST00000493161 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
SAMM50-204ENST00000493161 PPRC1Q5VV67 1664 aaKnown RBP23.88■■□□□ 1.41
SAMM50-204ENST00000493161 UHRF1BP1LA0JNW5 1464 aa23.87■■□□□ 1.41
SAMM50-204ENST00000493161 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
SAMM50-204ENST00000493161 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
SAMM50-204ENST00000493161 GLI2P10070 1586 aa23.85■■□□□ 1.41
SAMM50-204ENST00000493161 RAPGEF2Q9Y4G8 1499 aa23.82■■□□□ 1.4
SAMM50-204ENST00000493161 UGGT2Q9NYU1 1516 aa23.8■■□□□ 1.4
SAMM50-204ENST00000493161 KDM5BQ9UGL1 1544 aa23.79■■□□□ 1.4
SAMM50-204ENST00000493161 COL17A1Q9UMD9 1497 aaPredicted RBP23.78■■□□□ 1.4
SAMM50-204ENST00000493161 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
SAMM50-204ENST00000493161 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
SAMM50-204ENST00000493161 ZCCHC11Q5TAX3 1644 aaKnown RBP23.75■■□□□ 1.39
SAMM50-204ENST00000493161 MAP3K4Q9Y6R4 1608 aa23.73■■□□□ 1.39
SAMM50-204ENST00000493161 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
SAMM50-204ENST00000493161 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
SAMM50-204ENST00000493161 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
SAMM50-204ENST00000493161 CTTNBP2Q8WZ74 1663 aa23.62■■□□□ 1.37
SAMM50-204ENST00000493161 ABCA8O94911 1581 aa23.57■■□□□ 1.36
SAMM50-204ENST00000493161 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
SAMM50-204ENST00000493161 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
SAMM50-204ENST00000493161 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
SAMM50-204ENST00000493161 CD109Q6YHK3 1445 aa23.52■■□□□ 1.36
SAMM50-204ENST00000493161 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
SAMM50-204ENST00000493161 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
SAMM50-204ENST00000493161 ILDR1Q86SU0 546 aaPredicted RBP23.48■■□□□ 1.35
SAMM50-204ENST00000493161 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
SAMM50-204ENST00000493161 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
SAMM50-204ENST00000493161 HECW2Q9P2P5 1572 aa23.44■■□□□ 1.34
SAMM50-204ENST00000493161 ATP10BO94823 1461 aa23.39■■□□□ 1.34
SAMM50-204ENST00000493161 KIF21BO75037 1637 aa23.35■■□□□ 1.33
SAMM50-204ENST00000493161 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.32
SAMM50-204ENST00000493161 SAMD9Q5K651 1589 aa23.3■■□□□ 1.32
SAMM50-204ENST00000493161 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
SAMM50-204ENST00000493161 ABCA9Q8IUA7 1624 aa23.28■■□□□ 1.32
SAMM50-204ENST00000493161 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
SAMM50-204ENST00000493161 RAPGEF6Q8TEU7 1601 aa23.26■■□□□ 1.31
SAMM50-204ENST00000493161 RAPGEF3O95398 923 aa23.25■■□□□ 1.31
SAMM50-204ENST00000493161 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
SAMM50-204ENST00000493161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.22■■□□□ 1.31
SAMM50-204ENST00000493161 HNRNPUL2Q1KMD3 747 aaKnown RBP23.22■■□□□ 1.31
SAMM50-204ENST00000493161 NUP153P49790 1475 aaKnown RBP23.2■■□□□ 1.3
SAMM50-204ENST00000493161 PHLDB1Q86UU1 1377 aa23.19■■□□□ 1.3
SAMM50-204ENST00000493161 FHOD3Q2V2M9 1422 aa23.17■■□□□ 1.3
SAMM50-204ENST00000493161 FRMPD1Q5SYB0 1578 aa23.17■■□□□ 1.3
SAMM50-204ENST00000493161 NEO1Q92859 1461 aa23.17■■□□□ 1.3
SAMM50-204ENST00000493161 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
SAMM50-204ENST00000493161 PTPRMP28827 1452 aa23.14■■□□□ 1.29
SAMM50-204ENST00000493161 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.28
SAMM50-204ENST00000493161 ARID4BQ4LE39 1312 aaPredicted RBP23.08■■□□□ 1.28
SAMM50-204ENST00000493161 EEA1Q15075 1411 aa23.07■■□□□ 1.28
SAMM50-204ENST00000493161 PLEKHD1A6NEE1 506 aa23.06■■□□□ 1.28
SAMM50-204ENST00000493161 MADDQ8WXG6 1647 aa23.05■■□□□ 1.28
SAMM50-204ENST00000493161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
SAMM50-204ENST00000493161 AKNAQ7Z591 1439 aa23.03■■□□□ 1.28
SAMM50-204ENST00000493161 DENND4BO75064 1496 aaPredicted RBP23.03■■□□□ 1.28
SAMM50-204ENST00000493161 RICTORQ6R327 1708 aa23.02■■□□□ 1.28
SAMM50-204ENST00000493161 FANCAO15360 1455 aa23.01■■□□□ 1.27
SAMM50-204ENST00000493161 ARHGEF40Q8TER5 1519 aa23.01■■□□□ 1.27
SAMM50-204ENST00000493161 TTC37Q6PGP7 1564 aa23.01■■□□□ 1.27
SAMM50-204ENST00000493161 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
SAMM50-204ENST00000493161 EFCAB5A4FU69 1503 aa22.97■■□□□ 1.27
SAMM50-204ENST00000493161 LMTK3Q96Q04 1460 aa22.96■■□□□ 1.27
SAMM50-204ENST00000493161 RIMS1Q86UR5 1692 aaKnown RBP22.96■■□□□ 1.27
SAMM50-204ENST00000493161 PCF11O94913 1555 aaKnown RBP22.95■■□□□ 1.26
SAMM50-204ENST00000493161 EHMT2Q96KQ7 1210 aa22.95■■□□□ 1.26
SAMM50-204ENST00000493161 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
SAMM50-204ENST00000493161 YEATS2Q9ULM3 1422 aa22.94■■□□□ 1.26
SAMM50-204ENST00000493161 FBXO41Q8TF61 875 aa22.94■■□□□ 1.26
SAMM50-204ENST00000493161 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
SAMM50-204ENST00000493161 ZMYM4Q5VZL5 1548 aa22.92■■□□□ 1.26
SAMM50-204ENST00000493161 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
SAMM50-204ENST00000493161 ZFYVE16Q7Z3T8 1539 aa22.9■■□□□ 1.26
SAMM50-204ENST00000493161 HSPA2P54652 639 aa22.88■■□□□ 1.25
SAMM50-204ENST00000493161 HECW1Q76N89 1606 aa22.87■■□□□ 1.25
SAMM50-204ENST00000493161 PLCH2O75038 1416 aa22.86■■□□□ 1.25
SAMM50-204ENST00000493161 SCAPERQ9BY12 1400 aa22.86■■□□□ 1.25
SAMM50-204ENST00000493161 MLECQ14165 292 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms