RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PRKCSHP14314 528 aaPredicted RBP6.11□□□□□ -1.43
SNX13-209ENST00000492626 OSCARQ8IYS5 282 aa6.11□□□□□ -1.43
SNX13-209ENST00000492626 RGL2O15211 777 aa6.09□□□□□ -1.43
SNX13-209ENST00000492626 GSE1Q14687 1217 aa6.08□□□□□ -1.44
SNX13-209ENST00000492626 SSUH2Q9Y2M2 353 aa6.08□□□□□ -1.44
SNX13-209ENST00000492626 EIF4G1Q04637 1599 aaKnown RBP6.06□□□□□ -1.44
SNX13-209ENST00000492626 TSHZ2Q9NRE2 1034 aa6.06□□□□□ -1.44
SNX13-209ENST00000492626 NPM1P06748 294 aaKnown RBP eCLIP6.05□□□□□ -1.44
SNX13-209ENST00000492626 KDM2AQ9Y2K7 1162 aa6.05□□□□□ -1.44
SNX13-209ENST00000492626 DCAF8Q5TAQ9 597 aa6.03□□□□□ -1.44
SNX13-209ENST00000492626 DSG3P32926 999 aa6.02□□□□□ -1.45
SNX13-209ENST00000492626 RYDENQ9NUL5 291 aaKnown RBP6.02□□□□□ -1.45
SNX13-209ENST00000492626 HS6ST3Q8IZP7 471 aa6□□□□□ -1.45
SNX13-209ENST00000492626 FAM212AQ96EL1 285 aa5.99□□□□□ -1.45
SNX13-209ENST00000492626 DCAF1Q9Y4B6 1507 aa5.97□□□□□ -1.45
SNX13-209ENST00000492626 STK25O00506 426 aa5.97□□□□□ -1.45
SNX13-209ENST00000492626 ERICH6Q7L0X2 663 aa5.97□□□□□ -1.45
SNX13-209ENST00000492626 SPDYE1Q8NFV5 336 aaPredicted RBP5.96□□□□□ -1.45
SNX13-209ENST00000492626 THOC2Q8NI27 1593 aaKnown RBP5.96□□□□□ -1.46
SNX13-209ENST00000492626 RIOK3O14730 519 aaKnown RBP5.96□□□□□ -1.46
SNX13-209ENST00000492626 VGFO15240 615 aaPredicted RBP5.95□□□□□ -1.46
SNX13-209ENST00000492626 RBM42Q9BTD8 480 aaKnown RBP5.94□□□□□ -1.46
SNX13-209ENST00000492626 CLEC11AQ9Y240 323 aa5.94□□□□□ -1.46
SNX13-209ENST00000492626 TULP1O00294 542 aaPredicted RBP5.93□□□□□ -1.46
SNX13-209ENST00000492626 WDR70Q9NW82 654 aa5.92□□□□□ -1.46
SNX13-209ENST00000492626 PRR29P0C7W0 189 aa5.92□□□□□ -1.46
SNX13-209ENST00000492626 ERCC6L2Q5T890 1561 aa5.92□□□□□ -1.46
SNX13-209ENST00000492626 P3H3Q8IVL6 736 aa5.91□□□□□ -1.46
SNX13-209ENST00000492626 STK24Q9Y6E0 443 aa5.91□□□□□ -1.46
SNX13-209ENST00000492626 CACNB1Q02641 598 aaPredicted RBP5.9□□□□□ -1.46
SNX13-209ENST00000492626 BAZ1AQ9NRL2 1556 aaPredicted RBP5.88□□□□□ -1.47
SNX13-209ENST00000492626 LAMC3Q9Y6N6 1575 aa5.87□□□□□ -1.47
SNX13-209ENST00000492626 BCL11BQ9C0K0 894 aaPredicted RBP5.86□□□□□ -1.47
SNX13-209ENST00000492626 NUBP1P53384 320 aa5.86□□□□□ -1.47
SNX13-209ENST00000492626 AKT1S1Q96B36 256 aa5.85□□□□□ -1.47
SNX13-209ENST00000492626 ERCC6Q03468 1493 aa5.84□□□□□ -1.47
SNX13-209ENST00000492626 GTPBP6O43824 516 aaPredicted RBP5.84□□□□□ -1.47
SNX13-209ENST00000492626 RNF25Q96BH1 459 aaPredicted RBP5.84□□□□□ -1.47
SNX13-209ENST00000492626 HMGXB3Q12766 1538 aa5.84□□□□□ -1.48
SNX13-209ENST00000492626 POTEDQ86YR6 584 aa5.83□□□□□ -1.48
SNX13-209ENST00000492626 SMARCA2P51531 1590 aa5.83□□□□□ -1.48
SNX13-209ENST00000492626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.82□□□□□ -1.48
SNX13-209ENST00000492626 ZFP91Q96JP5 570 aaPredicted RBP5.82□□□□□ -1.48
SNX13-209ENST00000492626 RIMBP3CA6NJZ7 1639 aa5.82□□□□□ -1.48
SNX13-209ENST00000492626 RIMBP3BA6NNM3 1639 aa5.82□□□□□ -1.48
SNX13-209ENST00000492626 RIMBP3Q9UFD9 1639 aa5.82□□□□□ -1.48
SNX13-209ENST00000492626 CHRM1P11229 460 aaPredicted RBP5.82□□□□□ -1.48
SNX13-209ENST00000492626 ZNF467Q7Z7K2 595 aaPredicted RBP5.82□□□□□ -1.48
SNX13-209ENST00000492626 GTF3C3Q9Y5Q9 886 aa5.81□□□□□ -1.48
SNX13-209ENST00000492626 PYGBP11216 843 aa5.8□□□□□ -1.48
SNX13-209ENST00000492626 SGIP1Q9BQI5 828 aa5.8□□□□□ -1.48
SNX13-209ENST00000492626 NKX1-1Q15270 411 aaPredicted RBP5.8□□□□□ -1.48
SNX13-209ENST00000492626 WDR62O43379 1518 aa5.78□□□□□ -1.48
SNX13-209ENST00000492626 NCAPD3P42695 1498 aa5.77□□□□□ -1.49
SNX13-209ENST00000492626 TMEM132AQ24JP5 1023 aa5.77□□□□□ -1.49
SNX13-209ENST00000492626 PAK3O75914 559 aaPredicted RBP5.76□□□□□ -1.49
SNX13-209ENST00000492626 RASEFQ8IZ41 740 aa5.76□□□□□ -1.49
SNX13-209ENST00000492626 CREBZFQ9NS37 354 aa5.76□□□□□ -1.49
SNX13-209ENST00000492626 PDAP1Q13442 181 aaKnown RBP5.76□□□□□ -1.49
SNX13-209ENST00000492626 C14orf37Q86TY3 774 aa5.75□□□□□ -1.49
SNX13-209ENST00000492626 TSPYL2Q9H2G4 693 aaPredicted RBP5.75□□□□□ -1.49
SNX13-209ENST00000492626 BAZ1BQ9UIG0 1483 aaKnown RBP5.74□□□□□ -1.49
SNX13-209ENST00000492626 REM2Q8IYK8 340 aaPredicted RBP5.74□□□□□ -1.49
SNX13-209ENST00000492626 RSF1Q96T23 1441 aaPredicted RBP5.74□□□□□ -1.49
SNX13-209ENST00000492626 LMOD2Q6P5Q4 547 aa5.74□□□□□ -1.49
SNX13-209ENST00000492626 WDR97A6NE52 1622 aa5.74□□□□□ -1.49
SNX13-209ENST00000492626 SMYD5Q6GMV2 418 aa5.72□□□□□ -1.49
SNX13-209ENST00000492626 TIMELESSQ9UNS1 1208 aa5.71□□□□□ -1.5
SNX13-209ENST00000492626 PSEN1P49768 467 aa5.69□□□□□ -1.5
SNX13-209ENST00000492626 NLRP6P59044 892 aa5.68□□□□□ -1.5
SNX13-209ENST00000492626 ARXQ96QS3 562 aa5.68□□□□□ -1.5
SNX13-209ENST00000492626 GOLGA2Q08379 1002 aa5.68□□□□□ -1.5
SNX13-209ENST00000492626 KCNV2Q8TDN2 545 aa5.68□□□□□ -1.5
SNX13-209ENST00000492626 MRC2Q9UBG0 1479 aa5.68□□□□□ -1.5
SNX13-209ENST00000492626 MNX1P50219 401 aaPredicted RBP5.67□□□□□ -1.5
SNX13-209ENST00000492626 PDS5BQ9NTI5 1447 aa5.67□□□□□ -1.5
SNX13-209ENST00000492626 NEUROD2Q15784 382 aa5.67□□□□□ -1.5
SNX13-209ENST00000492626 ARHGEF1Q92888 912 aaKnown RBP5.67□□□□□ -1.5
SNX13-209ENST00000492626 DAXXQ9UER7 740 aaPredicted RBP5.67□□□□□ -1.5
SNX13-209ENST00000492626 ARHGEF11O15085 1522 aa5.67□□□□□ -1.5
SNX13-209ENST00000492626 E2F4Q16254 413 aa5.67□□□□□ -1.5
SNX13-209ENST00000492626 PEG3Q9GZU2 1588 aa5.66□□□□□ -1.5
SNX13-209ENST00000492626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.65□□□□□ -1.5
SNX13-209ENST00000492626 PCDHB8Q9UN66 801 aa5.65□□□□□ -1.5
SNX13-209ENST00000492626 PCDHB13Q9Y5F0 798 aa5.65□□□□□ -1.5
SNX13-209ENST00000492626 PITPNM1O00562 1244 aa5.65□□□□□ -1.5
SNX13-209ENST00000492626 ILDR1Q86SU0 546 aaPredicted RBP5.65□□□□□ -1.51
SNX13-209ENST00000492626 ZNF579Q8NAF0 562 aaKnown RBP5.65□□□□□ -1.51
SNX13-209ENST00000492626 HOMEZQ8IX15 550 aa5.64□□□□□ -1.51
SNX13-209ENST00000492626 SOX12O15370 315 aa5.63□□□□□ -1.51
SNX13-209ENST00000492626 CHADLQ6NUI6 762 aa5.63□□□□□ -1.51
SNX13-209ENST00000492626 FARP1Q9Y4F1 1045 aaPredicted RBP5.63□□□□□ -1.51
SNX13-209ENST00000492626 PDE4AP27815 886 aa5.63□□□□□ -1.51
SNX13-209ENST00000492626 KIF21AQ7Z4S6 1674 aa5.63□□□□□ -1.51
SNX13-209ENST00000492626 CABP2Q9NPB3 220 aa5.62□□□□□ -1.51
SNX13-209ENST00000492626 CADPS2Q86UW7 1296 aa5.6□□□□□ -1.51
SNX13-209ENST00000492626 KRI1Q8N9T8 703 aaKnown RBP5.6□□□□□ -1.51
SNX13-209ENST00000492626 FBXO41Q8TF61 875 aa5.6□□□□□ -1.51
SNX13-209ENST00000492626 SOCS7O14512 581 aa5.59□□□□□ -1.51
SNX13-209ENST00000492626 LARP6Q9BRS8 491 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms