RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 CCDC180Q9P1Z9 1646 aa11.57□□□□□ -0.56
FNDC3A-204ENST00000492622 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
FNDC3A-204ENST00000492622 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
FNDC3A-204ENST00000492622 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
FNDC3A-204ENST00000492622 SOGA1O94964 1423 aa11.55□□□□□ -0.56
FNDC3A-204ENST00000492622 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
FNDC3A-204ENST00000492622 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
FNDC3A-204ENST00000492622 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
FNDC3A-204ENST00000492622 B4GALNT3Q6L9W6 998 aa11.54□□□□□ -0.56
FNDC3A-204ENST00000492622 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
FNDC3A-204ENST00000492622 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
FNDC3A-204ENST00000492622 LAS1LQ9Y4W2 734 aaKnown RBP11.51□□□□□ -0.57
FNDC3A-204ENST00000492622 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
FNDC3A-204ENST00000492622 NEUROD2Q15784 382 aa11.51□□□□□ -0.57
FNDC3A-204ENST00000492622 CHMP7Q8WUX9 453 aaPredicted RBP11.51□□□□□ -0.57
FNDC3A-204ENST00000492622 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
FNDC3A-204ENST00000492622 FOXD1Q16676 465 aa11.49□□□□□ -0.57
FNDC3A-204ENST00000492622 TNIKQ9UKE5 1360 aa11.49□□□□□ -0.57
FNDC3A-204ENST00000492622 KANK4Q5T7N3 995 aaPredicted RBP11.49□□□□□ -0.57
FNDC3A-204ENST00000492622 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.48□□□□□ -0.57
FNDC3A-204ENST00000492622 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
FNDC3A-204ENST00000492622 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
FNDC3A-204ENST00000492622 ESF1Q9H501 851 aaKnown RBP11.47□□□□□ -0.57
FNDC3A-204ENST00000492622 CC2D1BQ5T0F9 858 aaKnown RBP11.46□□□□□ -0.58
FNDC3A-204ENST00000492622 ZBTB7CA1YPR0 619 aa11.45□□□□□ -0.58
FNDC3A-204ENST00000492622 CARD11Q9BXL7 1154 aa11.45□□□□□ -0.58
FNDC3A-204ENST00000492622 RB1CC1Q8TDY2 1594 aa11.45□□□□□ -0.58
FNDC3A-204ENST00000492622 RGS3P49796 1198 aa11.45□□□□□ -0.58
FNDC3A-204ENST00000492622 ABCC8Q09428 1581 aa11.44□□□□□ -0.58
FNDC3A-204ENST00000492622 PPM1GO15355 546 aaPredicted RBP11.44□□□□□ -0.58
FNDC3A-204ENST00000492622 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
FNDC3A-204ENST00000492622 CFDP1Q9UEE9 299 aaPredicted RBP11.42□□□□□ -0.58
FNDC3A-204ENST00000492622 NPM1P06748 294 aaKnown RBP eCLIP11.4□□□□□ -0.58
FNDC3A-204ENST00000492622 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
FNDC3A-204ENST00000492622 FRAT1Q92837 279 aaPredicted RBP11.39□□□□□ -0.59
FNDC3A-204ENST00000492622 CCNB3Q8WWL7 1395 aa11.38□□□□□ -0.59
FNDC3A-204ENST00000492622 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
FNDC3A-204ENST00000492622 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
FNDC3A-204ENST00000492622 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
FNDC3A-204ENST00000492622 EEA1Q15075 1411 aa11.38□□□□□ -0.59
FNDC3A-204ENST00000492622 RBM19Q9Y4C8 960 aaKnown RBP11.37□□□□□ -0.59
FNDC3A-204ENST00000492622 C14orf37Q86TY3 774 aa11.37□□□□□ -0.59
FNDC3A-204ENST00000492622 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
FNDC3A-204ENST00000492622 PPP4R2Q9NY27 417 aa11.36□□□□□ -0.59
FNDC3A-204ENST00000492622 A0A0G2JS52 829 aa11.36□□□□□ -0.59
FNDC3A-204ENST00000492622 KNSTRNQ9Y448 316 aa11.35□□□□□ -0.59
FNDC3A-204ENST00000492622 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
FNDC3A-204ENST00000492622 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
FNDC3A-204ENST00000492622 SPRYD3Q8NCJ5 442 aa11.34□□□□□ -0.59
FNDC3A-204ENST00000492622 NCLP19338 710 aaKnown RBP11.33□□□□□ -0.6
FNDC3A-204ENST00000492622 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
FNDC3A-204ENST00000492622 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
FNDC3A-204ENST00000492622 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
FNDC3A-204ENST00000492622 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
FNDC3A-204ENST00000492622 TAOK2Q9UL54 1235 aa11.3□□□□□ -0.6
FNDC3A-204ENST00000492622 PPP1R15AO75807 674 aaPredicted RBP11.29□□□□□ -0.6
FNDC3A-204ENST00000492622 FTSJ3Q8IY81 847 aaKnown RBP11.29□□□□□ -0.6
FNDC3A-204ENST00000492622 MYH16Q9H6N6 1097 aa11.29□□□□□ -0.6
FNDC3A-204ENST00000492622 RAB3GAP2Q9H2M9 1393 aa11.28□□□□□ -0.6
FNDC3A-204ENST00000492622 CUX2O14529 1486 aa11.28□□□□□ -0.6
FNDC3A-204ENST00000492622 SOX12O15370 315 aa11.28□□□□□ -0.6
FNDC3A-204ENST00000492622 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
FNDC3A-204ENST00000492622 U2SURPO15042 1029 aaKnown RBP11.27□□□□□ -0.6
FNDC3A-204ENST00000492622 DDRGK1Q96HY6 314 aa11.27□□□□□ -0.6
FNDC3A-204ENST00000492622 CARMIL1Q5VZK9 1371 aa11.27□□□□□ -0.61
FNDC3A-204ENST00000492622 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
FNDC3A-204ENST00000492622 BECN1Q14457 450 aa11.26□□□□□ -0.61
FNDC3A-204ENST00000492622 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
FNDC3A-204ENST00000492622 SETD5Q9C0A6 1442 aa11.25□□□□□ -0.61
FNDC3A-204ENST00000492622 RUSC2Q8N2Y8 1516 aa11.24□□□□□ -0.61
FNDC3A-204ENST00000492622 PKD2Q13563 968 aa11.23□□□□□ -0.61
FNDC3A-204ENST00000492622 ARID4BQ4LE39 1312 aaPredicted RBP11.23□□□□□ -0.61
FNDC3A-204ENST00000492622 TRIM44Q96DX7 344 aaPredicted RBP11.23□□□□□ -0.61
FNDC3A-204ENST00000492622 BAZ1AQ9NRL2 1556 aaPredicted RBP11.22□□□□□ -0.61
FNDC3A-204ENST00000492622 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
FNDC3A-204ENST00000492622 WIZO95785 1651 aa11.2□□□□□ -0.62
FNDC3A-204ENST00000492622 APBB1O00213 710 aa11.2□□□□□ -0.62
FNDC3A-204ENST00000492622 LMOD2Q6P5Q4 547 aa11.19□□□□□ -0.62
FNDC3A-204ENST00000492622 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
FNDC3A-204ENST00000492622 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
FNDC3A-204ENST00000492622 POGKQ9P215 609 aa11.19□□□□□ -0.62
FNDC3A-204ENST00000492622 NAP1L5Q96NT1 182 aaPredicted RBP11.19□□□□□ -0.62
FNDC3A-204ENST00000492622 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
FNDC3A-204ENST00000492622 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
FNDC3A-204ENST00000492622 MLECQ14165 292 aa11.18□□□□□ -0.62
FNDC3A-204ENST00000492622 STK26Q9P289 416 aa11.18□□□□□ -0.62
FNDC3A-204ENST00000492622 NACADO15069 1562 aa11.18□□□□□ -0.62
FNDC3A-204ENST00000492622 L3MBTL2Q969R5 705 aa11.18□□□□□ -0.62
FNDC3A-204ENST00000492622 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
FNDC3A-204ENST00000492622 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
FNDC3A-204ENST00000492622 SLKQ9H2G2 1235 aaPredicted RBP11.17□□□□□ -0.62
FNDC3A-204ENST00000492622 GLIPR1L2Q4G1C9 344 aa11.16□□□□□ -0.62
FNDC3A-204ENST00000492622 TMF1P82094 1093 aa11.16□□□□□ -0.62
FNDC3A-204ENST00000492622 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
FNDC3A-204ENST00000492622 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
FNDC3A-204ENST00000492622 NUTM2DQ5VT03 806 aaPredicted RBP11.16□□□□□ -0.62
FNDC3A-204ENST00000492622 PTMAP06454 111 aaKnown RBP11.16□□□□□ -0.62
FNDC3A-204ENST00000492622 ARHGAP35Q9NRY4 1499 aa11.15□□□□□ -0.62
FNDC3A-204ENST00000492622 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
FNDC3A-204ENST00000492622 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms