RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CUX1P39880 1505 aa22.04■■□□□ 1.12
CACNA1C-228ENST00000492150 LMTK3Q96Q04 1460 aa22.01■■□□□ 1.11
CACNA1C-228ENST00000492150 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
CACNA1C-228ENST00000492150 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
CACNA1C-228ENST00000492150 NPM1P06748 294 aaKnown RBP eCLIP21.98■■□□□ 1.11
CACNA1C-228ENST00000492150 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
CACNA1C-228ENST00000492150 ADCY10Q96PN6 1610 aa21.93■■□□□ 1.1
CACNA1C-228ENST00000492150 SOCS7O14512 581 aa21.85■■□□□ 1.09
CACNA1C-228ENST00000492150 FHAD1B1AJZ9 1412 aa21.84■■□□□ 1.09
CACNA1C-228ENST00000492150 PPRC1Q5VV67 1664 aaKnown RBP21.84■■□□□ 1.09
CACNA1C-228ENST00000492150 JPH4Q96JJ6 628 aa21.8■■□□□ 1.08
CACNA1C-228ENST00000492150 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
CACNA1C-228ENST00000492150 GLI2P10070 1586 aa21.75■■□□□ 1.07
CACNA1C-228ENST00000492150 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
CACNA1C-228ENST00000492150 COL17A1Q9UMD9 1497 aaPredicted RBP21.71■■□□□ 1.07
CACNA1C-228ENST00000492150 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
CACNA1C-228ENST00000492150 ILDR2Q71H61 639 aa21.68■■□□□ 1.06
CACNA1C-228ENST00000492150 PLB1Q6P1J6 1458 aa21.61■■□□□ 1.05
CACNA1C-228ENST00000492150 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
CACNA1C-228ENST00000492150 TEX14Q8IWB6 1497 aa21.58■■□□□ 1.05
CACNA1C-228ENST00000492150 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.04
CACNA1C-228ENST00000492150 DISP3Q9P2K9 1392 aa21.57■■□□□ 1.04
CACNA1C-228ENST00000492150 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
CACNA1C-228ENST00000492150 ABCC2Q92887 1545 aa21.55■■□□□ 1.04
CACNA1C-228ENST00000492150 EPRSP07814 1512 aaKnown RBP21.45■■□□□ 1.02
CACNA1C-228ENST00000492150 CUL7Q14999 1698 aa21.45■■□□□ 1.02
CACNA1C-228ENST00000492150 KIAA0586Q9BVV6 1533 aa21.45■■□□□ 1.02
CACNA1C-228ENST00000492150 BIVM-ERCC5R4GMW8 1640 aa21.44■■□□□ 1.02
CACNA1C-228ENST00000492150 PTPRGP23470 1445 aa21.43■■□□□ 1.02
CACNA1C-228ENST00000492150 PCF11O94913 1555 aaKnown RBP21.43■■□□□ 1.02
CACNA1C-228ENST00000492150 UHRF1BP1LA0JNW5 1464 aa21.41■■□□□ 1.02
CACNA1C-228ENST00000492150 KIF21BO75037 1637 aa21.4■■□□□ 1.02
CACNA1C-228ENST00000492150 SPATA31D1Q6ZQQ2 1576 aa21.4■■□□□ 1.02
CACNA1C-228ENST00000492150 PTPRMP28827 1452 aa21.39■■□□□ 1.02
CACNA1C-228ENST00000492150 ADAMTSL3P82987 1691 aa21.37■■□□□ 1.01
CACNA1C-228ENST00000492150 CERKQ8TCT0 537 aa21.35■■□□□ 1.01
CACNA1C-228ENST00000492150 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
CACNA1C-228ENST00000492150 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
CACNA1C-228ENST00000492150 MAGI3Q5TCQ9 1506 aa21.27■■□□□ 1
CACNA1C-228ENST00000492150 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
CACNA1C-228ENST00000492150 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
CACNA1C-228ENST00000492150 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
CACNA1C-228ENST00000492150 CFAP43Q8NDM7 1665 aa21.22■□□□□ 0.99
CACNA1C-228ENST00000492150 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
CACNA1C-228ENST00000492150 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
CACNA1C-228ENST00000492150 MADDQ8WXG6 1647 aa21.15■□□□□ 0.98
CACNA1C-228ENST00000492150 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.98
CACNA1C-228ENST00000492150 CD109Q6YHK3 1445 aa21.14■□□□□ 0.98
CACNA1C-228ENST00000492150 TTBK1Q5TCY1 1321 aaPredicted RBP21.14■□□□□ 0.97
CACNA1C-228ENST00000492150 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
CACNA1C-228ENST00000492150 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
CACNA1C-228ENST00000492150 HSPA2P54652 639 aa21.05■□□□□ 0.96
CACNA1C-228ENST00000492150 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
CACNA1C-228ENST00000492150 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
CACNA1C-228ENST00000492150 IGF1RP08069 1367 aa21.03■□□□□ 0.96
CACNA1C-228ENST00000492150 PHLDB1Q86UU1 1377 aa20.97■□□□□ 0.95
CACNA1C-228ENST00000492150 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
CACNA1C-228ENST00000492150 KIAA0556O60303 1618 aa20.89■□□□□ 0.94
CACNA1C-228ENST00000492150 KIF27Q86VH2 1401 aa20.89■□□□□ 0.94
CACNA1C-228ENST00000492150 IQSEC2Q5JU85 1478 aa20.88■□□□□ 0.93
CACNA1C-228ENST00000492150 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
CACNA1C-228ENST00000492150 FRMPD1Q5SYB0 1578 aa20.87■□□□□ 0.93
CACNA1C-228ENST00000492150 YEATS2Q9ULM3 1422 aa20.87■□□□□ 0.93
CACNA1C-228ENST00000492150 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
CACNA1C-228ENST00000492150 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
CACNA1C-228ENST00000492150 STRCQ7RTU9 1775 aa20.85■□□□□ 0.93
CACNA1C-228ENST00000492150 ARHGEF40Q8TER5 1519 aa20.85■□□□□ 0.93
CACNA1C-228ENST00000492150 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
CACNA1C-228ENST00000492150 PREX1Q8TCU6 1659 aa20.83■□□□□ 0.93
CACNA1C-228ENST00000492150 NEO1Q92859 1461 aa20.82■□□□□ 0.92
CACNA1C-228ENST00000492150 TTC37Q6PGP7 1564 aa20.81■□□□□ 0.92
CACNA1C-228ENST00000492150 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
CACNA1C-228ENST00000492150 ABCA9Q8IUA7 1624 aa20.8■□□□□ 0.92
CACNA1C-228ENST00000492150 ABCA8O94911 1581 aa20.8■□□□□ 0.92
CACNA1C-228ENST00000492150 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
CACNA1C-228ENST00000492150 FER1L4A9Z1Z3 1794 aa20.76■□□□□ 0.91
CACNA1C-228ENST00000492150 FANCAO15360 1455 aa20.75■□□□□ 0.91
CACNA1C-228ENST00000492150 LTBP4Q8N2S1 1624 aa20.75■□□□□ 0.91
CACNA1C-228ENST00000492150 PTPRTO14522 1441 aa20.75■□□□□ 0.91
CACNA1C-228ENST00000492150 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
CACNA1C-228ENST00000492150 SIGLEC1Q9BZZ2 1709 aa20.68■□□□□ 0.9
CACNA1C-228ENST00000492150 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
CACNA1C-228ENST00000492150 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
CACNA1C-228ENST00000492150 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
CACNA1C-228ENST00000492150 MED1Q15648 1581 aaPredicted RBP20.64■□□□□ 0.9
CACNA1C-228ENST00000492150 ZMYM4Q5VZL5 1548 aa20.63■□□□□ 0.89
CACNA1C-228ENST00000492150 FHOD3Q2V2M9 1422 aa20.63■□□□□ 0.89
CACNA1C-228ENST00000492150 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
CACNA1C-228ENST00000492150 ARHGEF12Q9NZN5 1544 aa20.61■□□□□ 0.89
CACNA1C-228ENST00000492150 DENND4BO75064 1496 aaPredicted RBP20.61■□□□□ 0.89
CACNA1C-228ENST00000492150 GOLGA3Q08378 1498 aa20.6■□□□□ 0.89
CACNA1C-228ENST00000492150 UHRF1BP1Q6BDS2 1440 aa20.6■□□□□ 0.89
CACNA1C-228ENST00000492150 ZFYVE16Q7Z3T8 1539 aa20.58■□□□□ 0.88
CACNA1C-228ENST00000492150 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
CACNA1C-228ENST00000492150 ATP10BO94823 1461 aa20.56■□□□□ 0.88
CACNA1C-228ENST00000492150 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
CACNA1C-228ENST00000492150 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
CACNA1C-228ENST00000492150 CFAP74Q9C0B2 1584 aa20.52■□□□□ 0.88
CACNA1C-228ENST00000492150 UBAP1LF5GYI3 381 aa20.48■□□□□ 0.87
CACNA1C-228ENST00000492150 MLECQ14165 292 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms