RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
EXD3-212ENST00000491734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
EXD3-212ENST00000491734 ACIN1Q9UKV3 1341 aaKnown RBP27.28■■□□□ 1.96
EXD3-212ENST00000491734 CTTNBP2Q8WZ74 1663 aa27.28■■□□□ 1.96
EXD3-212ENST00000491734 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.95
EXD3-212ENST00000491734 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
EXD3-212ENST00000491734 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
EXD3-212ENST00000491734 GRIN2BQ13224 1484 aa27.21■■□□□ 1.95
EXD3-212ENST00000491734 KANK4Q5T7N3 995 aaPredicted RBP27.19■■□□□ 1.94
EXD3-212ENST00000491734 ADAMTS12P58397 1594 aa27.19■■□□□ 1.94
EXD3-212ENST00000491734 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
EXD3-212ENST00000491734 EIF4G3O43432 1585 aaKnown RBP27.15■■□□□ 1.94
EXD3-212ENST00000491734 EFCAB5A4FU69 1503 aa27.12■■□□□ 1.93
EXD3-212ENST00000491734 HNRNPUL2Q1KMD3 747 aaKnown RBP27.11■■□□□ 1.93
EXD3-212ENST00000491734 P3H3Q8IVL6 736 aa27.11■■□□□ 1.93
EXD3-212ENST00000491734 NEUROD1Q13562 356 aa27.1■■□□□ 1.93
EXD3-212ENST00000491734 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
EXD3-212ENST00000491734 CENPBP07199 599 aaPredicted RBP27.05■■□□□ 1.92
EXD3-212ENST00000491734 SNAPC4Q5SXM2 1469 aa27.01■■□□□ 1.91
EXD3-212ENST00000491734 SAMD9Q5K651 1589 aa27.01■■□□□ 1.91
EXD3-212ENST00000491734 FHOD3Q2V2M9 1422 aa27■■□□□ 1.91
EXD3-212ENST00000491734 MAGI1Q96QZ7 1491 aaPredicted RBP26.96■■□□□ 1.91
EXD3-212ENST00000491734 MAP3K1Q13233 1512 aa26.94■■□□□ 1.9
EXD3-212ENST00000491734 IQGAP2Q13576 1575 aa26.93■■□□□ 1.9
EXD3-212ENST00000491734 PCF11O94913 1555 aaKnown RBP26.92■■□□□ 1.9
EXD3-212ENST00000491734 TIAM1Q13009 1591 aa26.91■■□□□ 1.9
EXD3-212ENST00000491734 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
EXD3-212ENST00000491734 ATP1B4Q9UN42 357 aaPredicted RBP26.89■■□□□ 1.9
EXD3-212ENST00000491734 GTF3C3Q9Y5Q9 886 aa26.88■■□□□ 1.89
EXD3-212ENST00000491734 MYT1Q01538 1121 aa26.88■■□□□ 1.89
EXD3-212ENST00000491734 SYNJ2O15056 1496 aa26.86■■□□□ 1.89
EXD3-212ENST00000491734 FYCO1Q9BQS8 1478 aa26.86■■□□□ 1.89
EXD3-212ENST00000491734 FMN1Q68DA7 1419 aa26.85■■□□□ 1.89
EXD3-212ENST00000491734 RRBP1Q9P2E9 1410 aaKnown RBP26.85■■□□□ 1.89
EXD3-212ENST00000491734 CASKIN1Q8WXD9 1431 aa26.84■■□□□ 1.89
EXD3-212ENST00000491734 CFAP43Q8NDM7 1665 aa26.84■■□□□ 1.89
EXD3-212ENST00000491734 LRRC9Q6ZRR7 1453 aa26.82■■□□□ 1.88
EXD3-212ENST00000491734 KIAA0586Q9BVV6 1533 aa26.82■■□□□ 1.88
EXD3-212ENST00000491734 UGGT2Q9NYU1 1516 aa26.81■■□□□ 1.88
EXD3-212ENST00000491734 CCNB3Q8WWL7 1395 aa26.78■■□□□ 1.88
EXD3-212ENST00000491734 ZNF316A6NFI3 1004 aaPredicted RBP26.77■■□□□ 1.88
EXD3-212ENST00000491734 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
EXD3-212ENST00000491734 CHMP7Q8WUX9 453 aaPredicted RBP26.73■■□□□ 1.87
EXD3-212ENST00000491734 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
EXD3-212ENST00000491734 NUP160Q12769 1436 aa26.7■■□□□ 1.86
EXD3-212ENST00000491734 LRRIQ1Q96JM4 1722 aa26.68■■□□□ 1.86
EXD3-212ENST00000491734 ITGAEP38570 1179 aa26.67■■□□□ 1.86
EXD3-212ENST00000491734 KIAA0556O60303 1618 aa26.66■■□□□ 1.86
EXD3-212ENST00000491734 DISP1Q96F81 1524 aa26.66■■□□□ 1.86
EXD3-212ENST00000491734 FBLN2P98095 1184 aa26.61■■□□□ 1.85
EXD3-212ENST00000491734 HECW1Q76N89 1606 aa26.57■■□□□ 1.84
EXD3-212ENST00000491734 FAM50AQ14320 339 aaKnown RBP26.54■■□□□ 1.84
EXD3-212ENST00000491734 CHD1O14646 1710 aa26.53■■□□□ 1.84
EXD3-212ENST00000491734 CCDC18Q5T9S5 1454 aa26.53■■□□□ 1.84
EXD3-212ENST00000491734 DHX57Q6P158 1386 aaKnown RBP26.53■■□□□ 1.84
EXD3-212ENST00000491734 MTUS2Q5JR59 1369 aa26.52■■□□□ 1.84
EXD3-212ENST00000491734 JPH4Q96JJ6 628 aa26.47■■□□□ 1.83
EXD3-212ENST00000491734 EPRSP07814 1512 aaKnown RBP26.47■■□□□ 1.83
EXD3-212ENST00000491734 EHBP1L1Q8N3D4 1523 aa26.45■■□□□ 1.82
EXD3-212ENST00000491734 CARMIL2Q6F5E8 1435 aa26.44■■□□□ 1.82
EXD3-212ENST00000491734 RAPGEF6Q8TEU7 1601 aa26.43■■□□□ 1.82
EXD3-212ENST00000491734 MAGI3Q5TCQ9 1506 aa26.41■■□□□ 1.82
EXD3-212ENST00000491734 RAB3GAP2Q9H2M9 1393 aa26.41■■□□□ 1.82
EXD3-212ENST00000491734 SUPT6HQ7KZ85 1726 aaKnown RBP26.4■■□□□ 1.82
EXD3-212ENST00000491734 ARID3CA6NKF2 412 aa26.39■■□□□ 1.82
EXD3-212ENST00000491734 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.81
EXD3-212ENST00000491734 NCOA2Q15596 1464 aa26.39■■□□□ 1.81
EXD3-212ENST00000491734 CDK13Q14004 1512 aaKnown RBP26.38■■□□□ 1.81
EXD3-212ENST00000491734 NUP153P49790 1475 aaKnown RBP26.37■■□□□ 1.81
EXD3-212ENST00000491734 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
EXD3-212ENST00000491734 MIER1Q8N108 512 aa26.36■■□□□ 1.81
EXD3-212ENST00000491734 SETD5Q9C0A6 1442 aa26.36■■□□□ 1.81
EXD3-212ENST00000491734 ARHGEF11O15085 1522 aa26.35■■□□□ 1.81
EXD3-212ENST00000491734 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.35■■□□□ 1.817e-7■■■■■ 46.1
EXD3-212ENST00000491734 SHROOM2Q13796 1616 aa26.33■■□□□ 1.81
EXD3-212ENST00000491734 MYOM3Q5VTT5 1437 aa26.3■■□□□ 1.8
EXD3-212ENST00000491734 PLB1Q6P1J6 1458 aa26.29■■□□□ 1.8
EXD3-212ENST00000491734 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
EXD3-212ENST00000491734 ABCA8O94911 1581 aa26.26■■□□□ 1.79
EXD3-212ENST00000491734 YTHDC1Q96MU7 727 aaKnown RBP26.26■■□□□ 1.79
EXD3-212ENST00000491734 PTPRKQ15262 1439 aa26.23■■□□□ 1.79
EXD3-212ENST00000491734 CLASP1Q7Z460 1538 aa26.22■■□□□ 1.79
EXD3-212ENST00000491734 MAPKBP1O60336 1514 aa26.18■■□□□ 1.78
EXD3-212ENST00000491734 PTPN23Q9H3S7 1636 aa26.16■■□□□ 1.78
EXD3-212ENST00000491734 CDK11AQ9UQ88 783 aaPredicted RBP26.14■■□□□ 1.78
EXD3-212ENST00000491734 PTPRGP23470 1445 aa26.14■■□□□ 1.78
EXD3-212ENST00000491734 TCOF1Q13428 1488 aaKnown RBP26.12■■□□□ 1.77
EXD3-212ENST00000491734 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
EXD3-212ENST00000491734 MIA2Q96PC5 1412 aa26.1■■□□□ 1.77
EXD3-212ENST00000491734 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
EXD3-212ENST00000491734 ERCC6L2Q5T890 1561 aa26.1■■□□□ 1.77
EXD3-212ENST00000491734 ATP10BO94823 1461 aa26.08■■□□□ 1.77
EXD3-212ENST00000491734 HFM1A2PYH4 1435 aa26.07■■□□□ 1.76
EXD3-212ENST00000491734 NAIPQ13075 1403 aa26.04■■□□□ 1.76
EXD3-212ENST00000491734 CHIC2Q9UKJ5 165 aa26.03■■□□□ 1.76
EXD3-212ENST00000491734 SIN3AQ96ST3 1273 aa26.03■■□□□ 1.76
EXD3-212ENST00000491734 UACAQ9BZF9 1416 aa26.02■■□□□ 1.76
EXD3-212ENST00000491734 KIF14Q15058 1648 aa26.01■■□□□ 1.76
EXD3-212ENST00000491734 RRP7BPQ9NSQ0 103 aa25.99■■□□□ 1.75
EXD3-212ENST00000491734 ITSN2Q9NZM3 1697 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms