RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC3-208	ENST00000491292	MRS2	Q9HD23	443 aa		13.51	□□□□□ -0.25
ERCC3-208	ENST00000491292	ANP32A	P39687	249 aa	Known RBP	13.5	□□□□□ -0.25
ERCC3-208	ENST00000491292	ARID3C	A6NKF2	412 aa		13.5	□□□□□ -0.25
ERCC3-208	ENST00000491292	CHIC2	Q9UKJ5	165 aa		13.49	□□□□□ -0.25
ERCC3-208	ENST00000491292	SALL2	Q9Y467	1007 aa	Predicted RBP	13.49	□□□□□ -0.25
ERCC3-208	ENST00000491292	CCDC136	Q96JN2	1154 aa		13.47	□□□□□ -0.25
ERCC3-208	ENST00000491292	TOP2A	P11388	1531 aa	Known RBP	13.46	□□□□□ -0.26
ERCC3-208	ENST00000491292	CCER2	I3L3R5	266 aa		13.46	□□□□□ -0.26
ERCC3-208	ENST00000491292	PPP4R2	Q9NY27	417 aa		13.46	□□□□□ -0.26
ERCC3-208	ENST00000491292	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.45	□□□□□ -0.26
ERCC3-208	ENST00000491292	BAZ1B	Q9UIG0	1483 aa	Known RBP	13.44	□□□□□ -0.26
ERCC3-208	ENST00000491292	NOP58	Q9Y2X3	529 aa	Known RBP	13.44	□□□□□ -0.26
ERCC3-208	ENST00000491292	PPP1R15A	O75807	674 aa	Predicted RBP	13.43	□□□□□ -0.26
ERCC3-208	ENST00000491292	EIF5B	O60841	1220 aa	Known RBP	13.42	□□□□□ -0.26
ERCC3-208	ENST00000491292	SMARCA2	P51531	1590 aa		13.41	□□□□□ -0.26
ERCC3-208	ENST00000491292	RRP7BP	Q9NSQ0	103 aa		13.41	□□□□□ -0.26
ERCC3-208	ENST00000491292	SETD5	Q9C0A6	1442 aa		13.4	□□□□□ -0.26
ERCC3-208	ENST00000491292	LAS1L	Q9Y4W2	734 aa	Known RBP	13.4	□□□□□ -0.26
ERCC3-208	ENST00000491292	DAXX	Q9UER7	740 aa	Predicted RBP	13.4	□□□□□ -0.26
ERCC3-208	ENST00000491292	KIF21B	O75037	1637 aa		13.4	□□□□□ -0.26
ERCC3-208	ENST00000491292	MYT1L	Q9UL68	1186 aa		13.37	□□□□□ -0.27
ERCC3-208	ENST00000491292	FANCI	Q9NVI1	1328 aa		13.36	□□□□□ -0.27
ERCC3-208	ENST00000491292	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.36	□□□□□ -0.27
ERCC3-208	ENST00000491292	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ERCC3-208	ENST00000491292	HSPA5	P11021	654 aa	Known RBP	13.35	□□□□□ -0.27
ERCC3-208	ENST00000491292	PAK3	O75914	559 aa	Predicted RBP	13.34	□□□□□ -0.27
ERCC3-208	ENST00000491292	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.33	□□□□□ -0.28
ERCC3-208	ENST00000491292	FOXD1	Q16676	465 aa		13.32	□□□□□ -0.28
ERCC3-208	ENST00000491292	CCDC184	Q52MB2	194 aa		13.31	□□□□□ -0.28
ERCC3-208	ENST00000491292	WDR97	A6NE52	1622 aa		13.3	□□□□□ -0.28
ERCC3-208	ENST00000491292	SMARCA4	P51532	1647 aa		13.3	□□□□□ -0.28
ERCC3-208	ENST00000491292	SYNJ1	O43426	1573 aa		13.29	□□□□□ -0.28
ERCC3-208	ENST00000491292	ARAP1	Q96P48	1450 aa		13.29	□□□□□ -0.28
ERCC3-208	ENST00000491292	NEFM	P07197	916 aa		13.28	□□□□□ -0.28
ERCC3-208	ENST00000491292	KIF27	Q86VH2	1401 aa		13.28	□□□□□ -0.28
ERCC3-208	ENST00000491292	TMC1	Q8TDI8	760 aa		13.26	□□□□□ -0.29
ERCC3-208	ENST00000491292	PRKCSH	P14314	528 aa	Predicted RBP	13.26	□□□□□ -0.29
ERCC3-208	ENST00000491292	MTUS2	Q5JR59	1369 aa		13.26	□□□□□ -0.29
ERCC3-208	ENST00000491292	TIMELESS	Q9UNS1	1208 aa		13.24	□□□□□ -0.29
ERCC3-208	ENST00000491292	PHLDB1	Q86UU1	1377 aa		13.23	□□□□□ -0.29
ERCC3-208	ENST00000491292	IL27	Q8NEV9	243 aa		13.23	□□□□□ -0.29
ERCC3-208	ENST00000491292	RRBP1	Q9P2E9	1410 aa	Known RBP	13.22	□□□□□ -0.29
ERCC3-208	ENST00000491292	EIF4G1	Q04637	1599 aa	Known RBP	13.22	□□□□□ -0.29
ERCC3-208	ENST00000491292	ARX	Q96QS3	562 aa		13.22	□□□□□ -0.29
ERCC3-208	ENST00000491292	IPO9	Q96P70	1041 aa	Known RBP	13.21	□□□□□ -0.3
ERCC3-208	ENST00000491292	WASHC2A	Q641Q2	1341 aa		13.18	□□□□□ -0.3
ERCC3-208	ENST00000491292	KDM2A	Q9Y2K7	1162 aa		13.18	□□□□□ -0.3
ERCC3-208	ENST00000491292	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.17	□□□□□ -0.3
ERCC3-208	ENST00000491292	L3MBTL2	Q969R5	705 aa		13.17	□□□□□ -0.3
ERCC3-208	ENST00000491292	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.16	□□□□□ -0.3
ERCC3-208	ENST00000491292	CUX2	O14529	1486 aa		13.15	□□□□□ -0.3
ERCC3-208	ENST00000491292	CARMIL1	Q5VZK9	1371 aa		13.15	□□□□□ -0.3
ERCC3-208	ENST00000491292	ERICH6B	Q5W0A0	696 aa		13.15	□□□□□ -0.3
ERCC3-208	ENST00000491292	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.14	□□□□□ -0.31
ERCC3-208	ENST00000491292	SLC4A3	P48751	1232 aa		13.13	□□□□□ -0.31
ERCC3-208	ENST00000491292	BICRA	Q9NZM4	1560 aa		13.13	□□□□□ -0.31
ERCC3-208	ENST00000491292	ARHGAP35	Q9NRY4	1499 aa		13.12	□□□□□ -0.31
ERCC3-208	ENST00000491292	FHOD3	Q2V2M9	1422 aa		13.12	□□□□□ -0.31
ERCC3-208	ENST00000491292	MAPKBP1	O60336	1514 aa		13.11	□□□□□ -0.31
ERCC3-208	ENST00000491292	AKNA	Q7Z591	1439 aa		13.1	□□□□□ -0.31
ERCC3-208	ENST00000491292	NUDC	Q9Y266	331 aa		13.09	□□□□□ -0.31
ERCC3-208	ENST00000491292	UNC13A	Q9UPW8	1703 aa		13.09	□□□□□ -0.31
ERCC3-208	ENST00000491292	ZBED9	Q6R2W3	1325 aa		13.09	□□□□□ -0.31
ERCC3-208	ENST00000491292	C11orf95	C9JLR9	678 aa	Predicted RBP	13.09	□□□□□ -0.31
ERCC3-208	ENST00000491292	ATAD2B	Q9ULI0	1458 aa		13.09	□□□□□ -0.31
ERCC3-208	ENST00000491292	EXOC6	Q8TAG9	804 aa		13.08	□□□□□ -0.32
ERCC3-208	ENST00000491292	MPHOSPH9	Q99550	1183 aa		13.07	□□□□□ -0.32
ERCC3-208	ENST00000491292	PRX	Q9BXM0	1461 aa		13.06	□□□□□ -0.32
ERCC3-208	ENST00000491292	FHAD1	B1AJZ9	1412 aa		13.06	□□□□□ -0.32
ERCC3-208	ENST00000491292	PLIN1	O60240	522 aa		13.05	□□□□□ -0.32
ERCC3-208	ENST00000491292	SKAP1	Q86WV1	359 aa		13.05	□□□□□ -0.32
ERCC3-208	ENST00000491292	RGS3	P49796	1198 aa		13.05	□□□□□ -0.32
ERCC3-208	ENST00000491292	CCDC18	Q5T9S5	1454 aa		13.05	□□□□□ -0.32
ERCC3-208	ENST00000491292	LRRC9	Q6ZRR7	1453 aa		13.05	□□□□□ -0.32
ERCC3-208	ENST00000491292	PPM1G	O15355	546 aa	Predicted RBP	13.04	□□□□□ -0.32
ERCC3-208	ENST00000491292	PDE4A	P27815	886 aa		13.04	□□□□□ -0.32
ERCC3-208	ENST00000491292	BRPF3	Q9ULD4	1205 aa		13.03	□□□□□ -0.32
ERCC3-208	ENST00000491292	RCAN3	Q9UKA8	241 aa		13.01	□□□□□ -0.33
ERCC3-208	ENST00000491292	IGF1R	P08069	1367 aa		13.01	□□□□□ -0.33
ERCC3-208	ENST00000491292	KIF7	Q2M1P5	1343 aa		13	□□□□□ -0.33
ERCC3-208	ENST00000491292	CARD11	Q9BXL7	1154 aa		13	□□□□□ -0.33
ERCC3-208	ENST00000491292	CCDC7	Q96M83	1385 aa		12.99	□□□□□ -0.33
ERCC3-208	ENST00000491292	CC2D1B	Q5T0F9	858 aa	Known RBP	12.99	□□□□□ -0.33
ERCC3-208	ENST00000491292	NBPF8	Q3BBV2	869 aa		12.98	□□□□□ -0.33
ERCC3-208	ENST00000491292	FMN1	Q68DA7	1419 aa		12.98	□□□□□ -0.33
ERCC3-208	ENST00000491292	RGL3	Q3MIN7	710 aa		12.97	□□□□□ -0.33
ERCC3-208	ENST00000491292	CNTLN	Q9NXG0	1405 aa		12.97	□□□□□ -0.33
ERCC3-208	ENST00000491292	TCERG1	O14776	1098 aa	Known RBP	12.97	□□□□□ -0.33
ERCC3-208	ENST00000491292	DDRGK1	Q96HY6	314 aa		12.97	□□□□□ -0.33
ERCC3-208	ENST00000491292	ERICH3	Q5RHP9	1530 aa		12.96	□□□□□ -0.33
ERCC3-208	ENST00000491292	CANX	P27824	592 aa	Known RBP	12.95	□□□□□ -0.34
ERCC3-208	ENST00000491292	UACA	Q9BZF9	1416 aa		12.94	□□□□□ -0.34
ERCC3-208	ENST00000491292	FGD6	Q6ZV73	1430 aa		12.94	□□□□□ -0.34
ERCC3-208	ENST00000491292	TIAM1	Q13009	1591 aa		12.93	□□□□□ -0.34
ERCC3-208	ENST00000491292	RRP1	P56182	461 aa	Known RBP	12.93	□□□□□ -0.34
ERCC3-208	ENST00000491292	TOP2B	Q02880	1626 aa		12.92	□□□□□ -0.34
ERCC3-208	ENST00000491292	GSE1	Q14687	1217 aa		12.92	□□□□□ -0.34
ERCC3-208	ENST00000491292	CDCA7L	Q96GN5	454 aa		12.91	□□□□□ -0.34
ERCC3-208	ENST00000491292	SPRYD3	Q8NCJ5	442 aa		12.9	□□□□□ -0.34
ERCC3-208	ENST00000491292	CRBN	Q96SW2	442 aa		12.9	□□□□□ -0.34

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