RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 JPH4Q96JJ6 628 aa36.81■■■■□ 3.48
CLIP2-208ENST00000491075 MAPKBP1O60336 1514 aa36.64■■■■□ 3.46
CLIP2-208ENST00000491075 ABCC10Q5T3U5 1492 aa36.62■■■■□ 3.45
CLIP2-208ENST00000491075 ADCY10Q96PN6 1610 aa36.6■■■■□ 3.45
CLIP2-208ENST00000491075 CUL7Q14999 1698 aa36.6■■■■□ 3.45
CLIP2-208ENST00000491075 NPM1P06748 294 aaKnown RBP eCLIP36.58■■■■□ 3.45
CLIP2-208ENST00000491075 KIAA0586Q9BVV6 1533 aa36.58■■■■□ 3.45
CLIP2-208ENST00000491075 DIP2BQ9P265 1576 aa36.56■■■■□ 3.44
CLIP2-208ENST00000491075 KIF27Q86VH2 1401 aa36.52■■■■□ 3.44
CLIP2-208ENST00000491075 FAM69CQ0P6D2 419 aa36.52■■■■□ 3.44
CLIP2-208ENST00000491075 IGF1RP08069 1367 aa36.5■■■■□ 3.43
CLIP2-208ENST00000491075 KDM6BO15054 1643 aa36.34■■■■□ 3.41
CLIP2-208ENST00000491075 TSPOAP1O95153 1857 aa36.31■■■■□ 3.4
CLIP2-208ENST00000491075 PTPRGP23470 1445 aa36.27■■■■□ 3.4
CLIP2-208ENST00000491075 CARMIL1Q5VZK9 1371 aa36.27■■■■□ 3.4
CLIP2-208ENST00000491075 CARMIL2Q6F5E8 1435 aa36.24■■■■□ 3.39
CLIP2-208ENST00000491075 IQGAP2Q13576 1575 aa36.21■■■■□ 3.39
CLIP2-208ENST00000491075 TNIKQ9UKE5 1360 aa36.19■■■■□ 3.38
CLIP2-208ENST00000491075 ABCC2Q92887 1545 aa36.18■■■■□ 3.38
CLIP2-208ENST00000491075 TTBK1Q5TCY1 1321 aaPredicted RBP36.09■■■■□ 3.37
CLIP2-208ENST00000491075 UHRF1BP1LA0JNW5 1464 aa36.08■■■■□ 3.37
CLIP2-208ENST00000491075 PLB1Q6P1J6 1458 aa36.08■■■■□ 3.37
CLIP2-208ENST00000491075 GLI2P10070 1586 aa36.07■■■■□ 3.37
CLIP2-208ENST00000491075 ASXL2Q76L83 1435 aa36.07■■■■□ 3.36
CLIP2-208ENST00000491075 PPRC1Q5VV67 1664 aaKnown RBP36.03■■■■□ 3.36
CLIP2-208ENST00000491075 KDM4FA0A1W2PPD8 638 aa36.02■■■■□ 3.36
CLIP2-208ENST00000491075 DISP1Q96F81 1524 aa36.02■■■■□ 3.36
CLIP2-208ENST00000491075 UACAQ9BZF9 1416 aa36■■■■□ 3.35
CLIP2-208ENST00000491075 UGGT2Q9NYU1 1516 aa35.95■■■■□ 3.35
CLIP2-208ENST00000491075 RAPGEF2Q9Y4G8 1499 aa35.93■■■■□ 3.34
CLIP2-208ENST00000491075 KDM5BQ9UGL1 1544 aa35.92■■■■□ 3.34
CLIP2-208ENST00000491075 KIAA0556O60303 1618 aa35.89■■■■□ 3.34
CLIP2-208ENST00000491075 MAP3K4Q9Y6R4 1608 aa35.88■■■■□ 3.33
CLIP2-208ENST00000491075 ZCCHC11Q5TAX3 1644 aaKnown RBP35.87■■■■□ 3.33
CLIP2-208ENST00000491075 EPRSP07814 1512 aaKnown RBP35.86■■■■□ 3.33
CLIP2-208ENST00000491075 TEX14Q8IWB6 1497 aa35.79■■■■□ 3.32
CLIP2-208ENST00000491075 CTTNBP2Q8WZ74 1663 aa35.78■■■■□ 3.32
CLIP2-208ENST00000491075 ADGRL1O94910 1474 aa35.73■■■■□ 3.31
CLIP2-208ENST00000491075 COL17A1Q9UMD9 1497 aaPredicted RBP35.72■■■■□ 3.31
CLIP2-208ENST00000491075 WDR7Q9Y4E6 1490 aa35.68■■■■□ 3.3
CLIP2-208ENST00000491075 GOLGA3Q08378 1498 aa35.63■■■■□ 3.29
CLIP2-208ENST00000491075 CFAP43Q8NDM7 1665 aa35.57■■■■□ 3.28
CLIP2-208ENST00000491075 ABCA8O94911 1581 aa35.56■■■■□ 3.28
CLIP2-208ENST00000491075 MAGI3Q5TCQ9 1506 aa35.5■■■■□ 3.27
CLIP2-208ENST00000491075 CD109Q6YHK3 1445 aa35.47■■■■□ 3.27
CLIP2-208ENST00000491075 PRXQ9BXM0 1461 aa35.46■■■■□ 3.27
CLIP2-208ENST00000491075 HECW2Q9P2P5 1572 aa35.38■■■■□ 3.25
CLIP2-208ENST00000491075 KCNH8Q96L42 1107 aa35.37■■■■□ 3.25
CLIP2-208ENST00000491075 ILDR1Q86SU0 546 aaPredicted RBP35.3■■■■□ 3.24
CLIP2-208ENST00000491075 FAM9AQ8IZU1 332 aaPredicted RBP35.26■■■■□ 3.24
CLIP2-208ENST00000491075 KIF21BO75037 1637 aa35.25■■■■□ 3.23
CLIP2-208ENST00000491075 ARAP3Q8WWN8 1544 aa35.24■■■■□ 3.23
CLIP2-208ENST00000491075 ATP10BO94823 1461 aa35.22■■■■□ 3.23
CLIP2-208ENST00000491075 ABCA9Q8IUA7 1624 aa35.21■■■■□ 3.23
CLIP2-208ENST00000491075 SAMD9Q5K651 1589 aa35.19■■■■□ 3.22
CLIP2-208ENST00000491075 RAPGEF6Q8TEU7 1601 aa35.14■■■■□ 3.22
CLIP2-208ENST00000491075 ARID3CA6NKF2 412 aa35.13■■■■□ 3.21
CLIP2-208ENST00000491075 P3H3Q8IVL6 736 aa35.13■■■■□ 3.21
CLIP2-208ENST00000491075 PHLDB1Q86UU1 1377 aa35.13■■■■□ 3.21
CLIP2-208ENST00000491075 NEO1Q92859 1461 aa35.03■■■■□ 3.2
CLIP2-208ENST00000491075 CSRNP3Q8WYN3 585 aa35.02■■■■□ 3.2
CLIP2-208ENST00000491075 ADAMTSL3P82987 1691 aa34.99■■■■□ 3.19
CLIP2-208ENST00000491075 NUP153P49790 1475 aaKnown RBP34.96■■■■□ 3.19
CLIP2-208ENST00000491075 FRMPD1Q5SYB0 1578 aa34.95■■■■□ 3.18
CLIP2-208ENST00000491075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.92■■■■□ 3.18
CLIP2-208ENST00000491075 HNRNPUL2Q1KMD3 747 aaKnown RBP34.92■■■■□ 3.18
CLIP2-208ENST00000491075 PTPRMP28827 1452 aa34.91■■■■□ 3.18
CLIP2-208ENST00000491075 EEA1Q15075 1411 aa34.91■■■■□ 3.18
CLIP2-208ENST00000491075 RAPGEF3O95398 923 aa34.91■■■■□ 3.18
CLIP2-208ENST00000491075 BCORL1Q5H9F3 1711 aa34.89■■■■□ 3.18
CLIP2-208ENST00000491075 FHOD3Q2V2M9 1422 aa34.85■■■■□ 3.17
CLIP2-208ENST00000491075 CFAP74Q9C0B2 1584 aa34.82■■■■□ 3.16
CLIP2-208ENST00000491075 ARHGEF40Q8TER5 1519 aa34.81■■■■□ 3.16
CLIP2-208ENST00000491075 MADDQ8WXG6 1647 aa34.81■■■■□ 3.16
CLIP2-208ENST00000491075 RICTORQ6R327 1708 aa34.81■■■■□ 3.16
CLIP2-208ENST00000491075 EFCAB5A4FU69 1503 aa34.77■■■■□ 3.16
CLIP2-208ENST00000491075 DENND4BO75064 1496 aaPredicted RBP34.76■■■■□ 3.15
CLIP2-208ENST00000491075 PLEKHD1A6NEE1 506 aa34.75■■■■□ 3.15
CLIP2-208ENST00000491075 RANGAP1P46060 587 aaPredicted RBP34.75■■■■□ 3.15
CLIP2-208ENST00000491075 ARID4BQ4LE39 1312 aaPredicted RBP34.74■■■■□ 3.15
CLIP2-208ENST00000491075 FANCAO15360 1455 aa34.72■■■■□ 3.15
CLIP2-208ENST00000491075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.72■■■■□ 3.15
CLIP2-208ENST00000491075 PCF11O94913 1555 aaKnown RBP34.71■■■■□ 3.15
CLIP2-208ENST00000491075 AKNAQ7Z591 1439 aa34.71■■■■□ 3.15
CLIP2-208ENST00000491075 TTC37Q6PGP7 1564 aa34.7■■■■□ 3.14
CLIP2-208ENST00000491075 RIMS1Q86UR5 1692 aaKnown RBP34.68■■■■□ 3.14
CLIP2-208ENST00000491075 ZMYM4Q5VZL5 1548 aa34.67■■■■□ 3.14
CLIP2-208ENST00000491075 LMTK3Q96Q04 1460 aa34.64■■■■□ 3.14
CLIP2-208ENST00000491075 FBXO41Q8TF61 875 aa34.63■■■■□ 3.13
CLIP2-208ENST00000491075 ZFYVE16Q7Z3T8 1539 aa34.6■■■■□ 3.13
CLIP2-208ENST00000491075 POGZQ7Z3K3 1410 aa34.58■■■■□ 3.13
CLIP2-208ENST00000491075 CDK13Q14004 1512 aaKnown RBP34.57■■■■□ 3.12
CLIP2-208ENST00000491075 MAGI2Q86UL8 1455 aa34.56■■■■□ 3.12
CLIP2-208ENST00000491075 SIGLEC1Q9BZZ2 1709 aa34.54■■■■□ 3.12
CLIP2-208ENST00000491075 YEATS2Q9ULM3 1422 aa34.51■■■■□ 3.12
CLIP2-208ENST00000491075 HECW1Q76N89 1606 aa34.51■■■■□ 3.11
CLIP2-208ENST00000491075 PLCH2O75038 1416 aa34.47■■■■□ 3.11
CLIP2-208ENST00000491075 FER1L4A9Z1Z3 1794 aa34.46■■■■□ 3.11
CLIP2-208ENST00000491075 MYO5CQ9NQX4 1742 aa34.46■■■■□ 3.11
CLIP2-208ENST00000491075 SCAPERQ9BY12 1400 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms