RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 JPH4Q96JJ6 628 aa27.58■■■□□ 2.01
SCAMP3-208ENST00000490999 ABCC10Q5T3U5 1492 aa27.54■■■□□ 2
SCAMP3-208ENST00000490999 FAM69CQ0P6D2 419 aa27.53■■■□□ 2
SCAMP3-208ENST00000490999 DIP2BQ9P265 1576 aa27.52■■■□□ 2
SCAMP3-208ENST00000490999 ADCY10Q96PN6 1610 aa27.51■■□□□ 1.99
SCAMP3-208ENST00000490999 MAPKBP1O60336 1514 aa27.5■■□□□ 1.99
SCAMP3-208ENST00000490999 NPM1P06748 294 aaKnown RBP eCLIP27.43■■□□□ 1.98
SCAMP3-208ENST00000490999 KDM6BO15054 1643 aa27.38■■□□□ 1.97
SCAMP3-208ENST00000490999 KIAA0586Q9BVV6 1533 aa27.35■■□□□ 1.97
SCAMP3-208ENST00000490999 TSPOAP1O95153 1857 aa27.3■■□□□ 1.96
SCAMP3-208ENST00000490999 IGF1RP08069 1367 aa27.28■■□□□ 1.96
SCAMP3-208ENST00000490999 KDM4FA0A1W2PPD8 638 aa27.28■■□□□ 1.96
SCAMP3-208ENST00000490999 CUL7Q14999 1698 aa27.27■■□□□ 1.96
SCAMP3-208ENST00000490999 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
SCAMP3-208ENST00000490999 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
SCAMP3-208ENST00000490999 PTPRGP23470 1445 aa27.19■■□□□ 1.94
SCAMP3-208ENST00000490999 ABCC2Q92887 1545 aa27.14■■□□□ 1.94
SCAMP3-208ENST00000490999 ASXL2Q76L83 1435 aa27.11■■□□□ 1.93
SCAMP3-208ENST00000490999 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
SCAMP3-208ENST00000490999 PPRC1Q5VV67 1664 aaKnown RBP27.09■■□□□ 1.93
SCAMP3-208ENST00000490999 CARMIL1Q5VZK9 1371 aa27.09■■□□□ 1.93
SCAMP3-208ENST00000490999 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
SCAMP3-208ENST00000490999 IQGAP2Q13576 1575 aa27.07■■□□□ 1.92
SCAMP3-208ENST00000490999 PLB1Q6P1J6 1458 aa27.04■■□□□ 1.92
SCAMP3-208ENST00000490999 GLI2P10070 1586 aa27.03■■□□□ 1.92
SCAMP3-208ENST00000490999 ADGRL1O94910 1474 aa27.02■■□□□ 1.92
SCAMP3-208ENST00000490999 UHRF1BP1LA0JNW5 1464 aa27■■□□□ 1.91
SCAMP3-208ENST00000490999 DISP1Q96F81 1524 aa26.99■■□□□ 1.91
SCAMP3-208ENST00000490999 UACAQ9BZF9 1416 aa26.98■■□□□ 1.91
SCAMP3-208ENST00000490999 COL17A1Q9UMD9 1497 aaPredicted RBP26.96■■□□□ 1.91
SCAMP3-208ENST00000490999 ILDR1Q86SU0 546 aaPredicted RBP26.94■■□□□ 1.9
SCAMP3-208ENST00000490999 EPRSP07814 1512 aaKnown RBP26.94■■□□□ 1.9
SCAMP3-208ENST00000490999 MAP3K4Q9Y6R4 1608 aa26.91■■□□□ 1.9
SCAMP3-208ENST00000490999 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
SCAMP3-208ENST00000490999 ZCCHC11Q5TAX3 1644 aaKnown RBP26.89■■□□□ 1.9
SCAMP3-208ENST00000490999 KIAA0556O60303 1618 aa26.86■■□□□ 1.89
SCAMP3-208ENST00000490999 UGGT2Q9NYU1 1516 aa26.85■■□□□ 1.89
SCAMP3-208ENST00000490999 TEX14Q8IWB6 1497 aa26.83■■□□□ 1.89
SCAMP3-208ENST00000490999 HECW2Q9P2P5 1572 aa26.81■■□□□ 1.88
SCAMP3-208ENST00000490999 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
SCAMP3-208ENST00000490999 WDR7Q9Y4E6 1490 aa26.77■■□□□ 1.88
SCAMP3-208ENST00000490999 CD109Q6YHK3 1445 aa26.63■■□□□ 1.85
SCAMP3-208ENST00000490999 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
SCAMP3-208ENST00000490999 ABCA8O94911 1581 aa26.62■■□□□ 1.85
SCAMP3-208ENST00000490999 MAGI3Q5TCQ9 1506 aa26.6■■□□□ 1.85
SCAMP3-208ENST00000490999 CFAP43Q8NDM7 1665 aa26.6■■□□□ 1.85
SCAMP3-208ENST00000490999 KCNH8Q96L42 1107 aa26.59■■□□□ 1.85
SCAMP3-208ENST00000490999 KIF21BO75037 1637 aa26.57■■□□□ 1.84
SCAMP3-208ENST00000490999 GOLGA3Q08378 1498 aa26.55■■□□□ 1.84
SCAMP3-208ENST00000490999 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
SCAMP3-208ENST00000490999 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
SCAMP3-208ENST00000490999 ARAP3Q8WWN8 1544 aa26.4■■□□□ 1.82
SCAMP3-208ENST00000490999 P3H3Q8IVL6 736 aa26.38■■□□□ 1.81
SCAMP3-208ENST00000490999 ATP10BO94823 1461 aa26.36■■□□□ 1.81
SCAMP3-208ENST00000490999 ABCA9Q8IUA7 1624 aa26.33■■□□□ 1.81
SCAMP3-208ENST00000490999 PTPRMP28827 1452 aa26.32■■□□□ 1.8
SCAMP3-208ENST00000490999 ADAMTSL3P82987 1691 aa26.3■■□□□ 1.8
SCAMP3-208ENST00000490999 RAPGEF3O95398 923 aa26.29■■□□□ 1.8
SCAMP3-208ENST00000490999 FRMPD1Q5SYB0 1578 aa26.28■■□□□ 1.8
SCAMP3-208ENST00000490999 SAMD9Q5K651 1589 aa26.25■■□□□ 1.79
SCAMP3-208ENST00000490999 RAPGEF6Q8TEU7 1601 aa26.24■■□□□ 1.79
SCAMP3-208ENST00000490999 MADDQ8WXG6 1647 aa26.24■■□□□ 1.79
SCAMP3-208ENST00000490999 FBXO41Q8TF61 875 aa26.22■■□□□ 1.79
SCAMP3-208ENST00000490999 NEO1Q92859 1461 aa26.22■■□□□ 1.79
SCAMP3-208ENST00000490999 BCORL1Q5H9F3 1711 aa26.2■■□□□ 1.79
SCAMP3-208ENST00000490999 PHLDB1Q86UU1 1377 aa26.2■■□□□ 1.78
SCAMP3-208ENST00000490999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.19■■□□□ 1.78
SCAMP3-208ENST00000490999 HNRNPUL2Q1KMD3 747 aaKnown RBP26.19■■□□□ 1.78
SCAMP3-208ENST00000490999 ARID4BQ4LE39 1312 aaPredicted RBP26.18■■□□□ 1.78
SCAMP3-208ENST00000490999 PCF11O94913 1555 aaKnown RBP26.18■■□□□ 1.78
SCAMP3-208ENST00000490999 NUP153P49790 1475 aaKnown RBP26.17■■□□□ 1.78
SCAMP3-208ENST00000490999 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
SCAMP3-208ENST00000490999 ARHGEF40Q8TER5 1519 aa26.16■■□□□ 1.78
SCAMP3-208ENST00000490999 LMTK3Q96Q04 1460 aa26.16■■□□□ 1.78
SCAMP3-208ENST00000490999 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
SCAMP3-208ENST00000490999 FHOD3Q2V2M9 1422 aa26.13■■□□□ 1.77
SCAMP3-208ENST00000490999 RIMS1Q86UR5 1692 aaKnown RBP26.11■■□□□ 1.77
SCAMP3-208ENST00000490999 RICTORQ6R327 1708 aa26.05■■□□□ 1.76
SCAMP3-208ENST00000490999 DENND4BO75064 1496 aaPredicted RBP26.05■■□□□ 1.76
SCAMP3-208ENST00000490999 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
SCAMP3-208ENST00000490999 CSRNP3Q8WYN3 585 aa26.03■■□□□ 1.76
SCAMP3-208ENST00000490999 FANCAO15360 1455 aa26.03■■□□□ 1.76
SCAMP3-208ENST00000490999 TTC37Q6PGP7 1564 aa26.03■■□□□ 1.76
SCAMP3-208ENST00000490999 AKNAQ7Z591 1439 aa26.02■■□□□ 1.76
SCAMP3-208ENST00000490999 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
SCAMP3-208ENST00000490999 HSPA2P54652 639 aa26.01■■□□□ 1.75
SCAMP3-208ENST00000490999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26■■□□□ 1.75
SCAMP3-208ENST00000490999 YEATS2Q9ULM3 1422 aa25.99■■□□□ 1.75
SCAMP3-208ENST00000490999 CFAP74Q9C0B2 1584 aa25.99■■□□□ 1.75
SCAMP3-208ENST00000490999 ZFYVE16Q7Z3T8 1539 aa25.98■■□□□ 1.75
SCAMP3-208ENST00000490999 ZMYM4Q5VZL5 1548 aa25.97■■□□□ 1.75
SCAMP3-208ENST00000490999 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
SCAMP3-208ENST00000490999 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-208ENST00000490999 EFCAB5A4FU69 1503 aa25.92■■□□□ 1.74
SCAMP3-208ENST00000490999 POGZQ7Z3K3 1410 aa25.91■■□□□ 1.74
SCAMP3-208ENST00000490999 MLECQ14165 292 aa25.9■■□□□ 1.74
SCAMP3-208ENST00000490999 HECW1Q76N89 1606 aa25.89■■□□□ 1.74
SCAMP3-208ENST00000490999 FER1L4A9Z1Z3 1794 aa25.85■■□□□ 1.73
SCAMP3-208ENST00000490999 EEA1Q15075 1411 aa25.83■■□□□ 1.73
SCAMP3-208ENST00000490999 MAGI2Q86UL8 1455 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms