RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
EXOSC3-207ENST00000490516 MAPKBP1O60336 1514 aa25.42■■□□□ 1.66
EXOSC3-207ENST00000490516 NPM1P06748 294 aaKnown RBP eCLIP25.38■■□□□ 1.65
EXOSC3-207ENST00000490516 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
EXOSC3-207ENST00000490516 ADCY10Q96PN6 1610 aa25.36■■□□□ 1.65
EXOSC3-207ENST00000490516 WRNQ14191 1432 aaPredicted RBP eCLIP25.34■■□□□ 1.65
EXOSC3-207ENST00000490516 ERICH3Q5RHP9 1530 aa25.29■■□□□ 1.64
EXOSC3-207ENST00000490516 RUSC2Q8N2Y8 1516 aa25.26■■□□□ 1.63
EXOSC3-207ENST00000490516 ADGRL1O94910 1474 aa25.22■■□□□ 1.63
EXOSC3-207ENST00000490516 BIVM-ERCC5R4GMW8 1640 aa25.22■■□□□ 1.63
EXOSC3-207ENST00000490516 TOP2BQ02880 1626 aa25.19■■□□□ 1.62
EXOSC3-207ENST00000490516 HECW2Q9P2P5 1572 aa25.19■■□□□ 1.62
EXOSC3-207ENST00000490516 PPRC1Q5VV67 1664 aaKnown RBP25.12■■□□□ 1.61
EXOSC3-207ENST00000490516 KIAA0586Q9BVV6 1533 aa24.98■■□□□ 1.59
EXOSC3-207ENST00000490516 COL17A1Q9UMD9 1497 aaPredicted RBP24.98■■□□□ 1.59
EXOSC3-207ENST00000490516 GLI2P10070 1586 aa24.97■■□□□ 1.59
EXOSC3-207ENST00000490516 ASXL2Q76L83 1435 aa24.95■■□□□ 1.59
EXOSC3-207ENST00000490516 TTBK1Q5TCY1 1321 aaPredicted RBP24.95■■□□□ 1.58
EXOSC3-207ENST00000490516 ABCC2Q92887 1545 aa24.93■■□□□ 1.58
EXOSC3-207ENST00000490516 PTPRGP23470 1445 aa24.93■■□□□ 1.58
EXOSC3-207ENST00000490516 CUL7Q14999 1698 aa24.92■■□□□ 1.58
EXOSC3-207ENST00000490516 PLB1Q6P1J6 1458 aa24.9■■□□□ 1.58
EXOSC3-207ENST00000490516 FBXO41Q8TF61 875 aa24.89■■□□□ 1.58
EXOSC3-207ENST00000490516 MAP3K4Q9Y6R4 1608 aa24.86■■□□□ 1.57
EXOSC3-207ENST00000490516 TNIKQ9UKE5 1360 aa24.8■■□□□ 1.56
EXOSC3-207ENST00000490516 EPRSP07814 1512 aaKnown RBP24.79■■□□□ 1.56
EXOSC3-207ENST00000490516 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
EXOSC3-207ENST00000490516 IGF1RP08069 1367 aa24.76■■□□□ 1.55
EXOSC3-207ENST00000490516 UHRF1BP1LA0JNW5 1464 aa24.76■■□□□ 1.55
EXOSC3-207ENST00000490516 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
EXOSC3-207ENST00000490516 CARMIL2Q6F5E8 1435 aa24.74■■□□□ 1.55
EXOSC3-207ENST00000490516 UACAQ9BZF9 1416 aa24.71■■□□□ 1.55
EXOSC3-207ENST00000490516 ZCCHC11Q5TAX3 1644 aaKnown RBP24.68■■□□□ 1.54
EXOSC3-207ENST00000490516 KDM5BQ9UGL1 1544 aa24.67■■□□□ 1.54
EXOSC3-207ENST00000490516 IQGAP2Q13576 1575 aa24.64■■□□□ 1.54
EXOSC3-207ENST00000490516 KIF21BO75037 1637 aa24.64■■□□□ 1.53
EXOSC3-207ENST00000490516 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
EXOSC3-207ENST00000490516 DISP1Q96F81 1524 aa24.61■■□□□ 1.53
EXOSC3-207ENST00000490516 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
EXOSC3-207ENST00000490516 WDR7Q9Y4E6 1490 aa24.54■■□□□ 1.52
EXOSC3-207ENST00000490516 LMTK3Q96Q04 1460 aa24.52■■□□□ 1.52
EXOSC3-207ENST00000490516 CFAP43Q8NDM7 1665 aa24.51■■□□□ 1.51
EXOSC3-207ENST00000490516 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
EXOSC3-207ENST00000490516 MAGI3Q5TCQ9 1506 aa24.5■■□□□ 1.51
EXOSC3-207ENST00000490516 PTPRMP28827 1452 aa24.47■■□□□ 1.51
EXOSC3-207ENST00000490516 ADAMTSL3P82987 1691 aa24.46■■□□□ 1.51
EXOSC3-207ENST00000490516 KIAA0556O60303 1618 aa24.44■■□□□ 1.5
EXOSC3-207ENST00000490516 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
EXOSC3-207ENST00000490516 UGGT2Q9NYU1 1516 aa24.43■■□□□ 1.5
EXOSC3-207ENST00000490516 PCF11O94913 1555 aaKnown RBP24.39■■□□□ 1.5
EXOSC3-207ENST00000490516 ARAP3Q8WWN8 1544 aa24.35■■□□□ 1.49
EXOSC3-207ENST00000490516 ILDR2Q71H61 639 aa24.32■■□□□ 1.48
EXOSC3-207ENST00000490516 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
EXOSC3-207ENST00000490516 BCORL1Q5H9F3 1711 aa24.31■■□□□ 1.48
EXOSC3-207ENST00000490516 ABCA8O94911 1581 aa24.27■■□□□ 1.48
EXOSC3-207ENST00000490516 SOCS7O14512 581 aa24.26■■□□□ 1.47
EXOSC3-207ENST00000490516 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
EXOSC3-207ENST00000490516 HSPA2P54652 639 aa24.23■■□□□ 1.47
EXOSC3-207ENST00000490516 DISP3Q9P2K9 1392 aa24.23■■□□□ 1.47
EXOSC3-207ENST00000490516 RIMS1Q86UR5 1692 aaKnown RBP24.22■■□□□ 1.47
EXOSC3-207ENST00000490516 CERKQ8TCT0 537 aa24.22■■□□□ 1.47
EXOSC3-207ENST00000490516 RAPGEF3O95398 923 aa24.21■■□□□ 1.47
EXOSC3-207ENST00000490516 ARID4BQ4LE39 1312 aaPredicted RBP24.2■■□□□ 1.46
EXOSC3-207ENST00000490516 CTTNBP2Q8WZ74 1663 aa24.18■■□□□ 1.46
EXOSC3-207ENST00000490516 FRMPD1Q5SYB0 1578 aa24.15■■□□□ 1.46
EXOSC3-207ENST00000490516 ABCA9Q8IUA7 1624 aa24.14■■□□□ 1.46
EXOSC3-207ENST00000490516 ARID3CA6NKF2 412 aa24.13■■□□□ 1.45
EXOSC3-207ENST00000490516 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
EXOSC3-207ENST00000490516 GOLGA3Q08378 1498 aa24.12■■□□□ 1.45
EXOSC3-207ENST00000490516 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
EXOSC3-207ENST00000490516 NEO1Q92859 1461 aa24.07■■□□□ 1.44
EXOSC3-207ENST00000490516 ATP10BO94823 1461 aa24.06■■□□□ 1.44
EXOSC3-207ENST00000490516 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
EXOSC3-207ENST00000490516 SPATA31D1Q6ZQQ2 1576 aa24.01■■□□□ 1.43
EXOSC3-207ENST00000490516 SIGLEC1Q9BZZ2 1709 aa23.99■■□□□ 1.43
EXOSC3-207ENST00000490516 RICTORQ6R327 1708 aa23.98■■□□□ 1.43
EXOSC3-207ENST00000490516 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
EXOSC3-207ENST00000490516 P3H3Q8IVL6 736 aa23.92■■□□□ 1.42
EXOSC3-207ENST00000490516 FANCAO15360 1455 aa23.92■■□□□ 1.42
EXOSC3-207ENST00000490516 POGZQ7Z3K3 1410 aa23.91■■□□□ 1.42
EXOSC3-207ENST00000490516 DENND4BO75064 1496 aaPredicted RBP23.9■■□□□ 1.42
EXOSC3-207ENST00000490516 STRCQ7RTU9 1775 aa23.88■■□□□ 1.41
EXOSC3-207ENST00000490516 TTC37Q6PGP7 1564 aa23.88■■□□□ 1.41
EXOSC3-207ENST00000490516 AKNAQ7Z591 1439 aa23.87■■□□□ 1.41
EXOSC3-207ENST00000490516 PREX1Q8TCU6 1659 aa23.87■■□□□ 1.41
EXOSC3-207ENST00000490516 MLECQ14165 292 aa23.87■■□□□ 1.41
EXOSC3-207ENST00000490516 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
EXOSC3-207ENST00000490516 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
EXOSC3-207ENST00000490516 YEATS2Q9ULM3 1422 aa23.85■■□□□ 1.41
EXOSC3-207ENST00000490516 RAPGEF6Q8TEU7 1601 aa23.85■■□□□ 1.41
EXOSC3-207ENST00000490516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
EXOSC3-207ENST00000490516 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
EXOSC3-207ENST00000490516 ZFYVE16Q7Z3T8 1539 aa23.84■■□□□ 1.41
EXOSC3-207ENST00000490516 ZMYM4Q5VZL5 1548 aa23.83■■□□□ 1.41
EXOSC3-207ENST00000490516 EFCAB5A4FU69 1503 aa23.81■■□□□ 1.4
EXOSC3-207ENST00000490516 CFAP74Q9C0B2 1584 aa23.79■■□□□ 1.4
EXOSC3-207ENST00000490516 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
EXOSC3-207ENST00000490516 CEBPAP49715 358 aaPredicted RBP23.76■■□□□ 1.39
EXOSC3-207ENST00000490516 HECW1Q76N89 1606 aa23.76■■□□□ 1.39
EXOSC3-207ENST00000490516 PRXQ9BXM0 1461 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms