RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 EFCAB5A4FU69 1503 aa39.97■■■■□ 3.99
KCNC4-207ENST00000489935 MAP3K1Q13233 1512 aa39.97■■■■□ 3.99
KCNC4-207ENST00000489935 TIAM1Q13009 1591 aa39.96■■■■□ 3.99
KCNC4-207ENST00000489935 FHAD1B1AJZ9 1412 aa39.95■■■■□ 3.99
KCNC4-207ENST00000489935 FHOD3Q2V2M9 1422 aa39.93■■■■□ 3.98
KCNC4-207ENST00000489935 PBRM1Q86U86 1689 aa39.9■■■■□ 3.98
KCNC4-207ENST00000489935 RRBP1Q9P2E9 1410 aaKnown RBP39.89■■■■□ 3.98
KCNC4-207ENST00000489935 PCF11O94913 1555 aaKnown RBP39.89■■■■□ 3.98
KCNC4-207ENST00000489935 AQRO60306 1485 aaKnown RBP eCLIP39.87■■■■□ 3.97
KCNC4-207ENST00000489935 WDR62O43379 1518 aa39.85■■■■□ 3.97
KCNC4-207ENST00000489935 LRRC9Q6ZRR7 1453 aa39.79■■■■□ 3.96
KCNC4-207ENST00000489935 CFAP43Q8NDM7 1665 aa39.77■■■■□ 3.96
KCNC4-207ENST00000489935 IFT140Q96RY7 1462 aa39.75■■■■□ 3.95
KCNC4-207ENST00000489935 SAMD9Q5K651 1589 aa39.74■■■■□ 3.95
KCNC4-207ENST00000489935 FYCO1Q9BQS8 1478 aa39.73■■■■□ 3.95
KCNC4-207ENST00000489935 CASKIN1Q8WXD9 1431 aa39.73■■■■□ 3.95
KCNC4-207ENST00000489935 CCNB3Q8WWL7 1395 aa39.72■■■■□ 3.95
KCNC4-207ENST00000489935 ZNF608Q9ULD9 1512 aaPredicted RBP39.7■■■■□ 3.95
KCNC4-207ENST00000489935 ADAMTS12P58397 1594 aa39.7■■■■□ 3.95
KCNC4-207ENST00000489935 ATP1B4Q9UN42 357 aaPredicted RBP39.7■■■■□ 3.95
KCNC4-207ENST00000489935 GRIN2BQ13224 1484 aa39.69■■■■□ 3.94
KCNC4-207ENST00000489935 ERCC6Q03468 1493 aa39.67■■■■□ 3.94
KCNC4-207ENST00000489935 FMN1Q68DA7 1419 aa39.66■■■■□ 3.94
KCNC4-207ENST00000489935 SNAPC4Q5SXM2 1469 aa39.6■■■■□ 3.93
KCNC4-207ENST00000489935 THOC2Q8NI27 1593 aaKnown RBP39.57■■■■□ 3.92
KCNC4-207ENST00000489935 PHLDB1Q86UU1 1377 aa39.56■■■■□ 3.92
KCNC4-207ENST00000489935 IQGAP2Q13576 1575 aa39.48■■■■□ 3.91
KCNC4-207ENST00000489935 EIF4G3O43432 1585 aaKnown RBP39.47■■■■□ 3.91
KCNC4-207ENST00000489935 LRRIQ1Q96JM4 1722 aa39.46■■■■□ 3.91
KCNC4-207ENST00000489935 ITGAEP38570 1179 aa39.44■■■■□ 3.9
KCNC4-207ENST00000489935 DHX57Q6P158 1386 aaKnown RBP39.4■■■■□ 3.9
KCNC4-207ENST00000489935 UGGT2Q9NYU1 1516 aa39.28■■■■□ 3.88
KCNC4-207ENST00000489935 FAM50AQ14320 339 aaKnown RBP39.28■■■■□ 3.88
KCNC4-207ENST00000489935 CLSPNQ9HAW4 1339 aa39.27■■■■□ 3.88
KCNC4-207ENST00000489935 GRIN2AQ12879 1464 aa39.26■■■■□ 3.88
KCNC4-207ENST00000489935 MTUS2Q5JR59 1369 aa39.26■■■■□ 3.88
KCNC4-207ENST00000489935 KIAA0586Q9BVV6 1533 aa39.24■■■■□ 3.87
KCNC4-207ENST00000489935 MAGI1Q96QZ7 1491 aaPredicted RBP39.2■■■■□ 3.87
KCNC4-207ENST00000489935 RAB3GAP2Q9H2M9 1393 aa39.17■■■■□ 3.86
KCNC4-207ENST00000489935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.16■■■■□ 3.86
KCNC4-207ENST00000489935 HECW1Q76N89 1606 aa39.14■■■■□ 3.86
KCNC4-207ENST00000489935 CCDC18Q5T9S5 1454 aa39.13■■■■□ 3.85
KCNC4-207ENST00000489935 FGD6Q6ZV73 1430 aa39.13■■■■□ 3.85
KCNC4-207ENST00000489935 SETD5Q9C0A6 1442 aa39.12■■■■□ 3.85
KCNC4-207ENST00000489935 DISP1Q96F81 1524 aa39.11■■■■□ 3.85
KCNC4-207ENST00000489935 SYNJ2O15056 1496 aa39.11■■■■□ 3.85
KCNC4-207ENST00000489935 NCOA2Q15596 1464 aa39.11■■■■□ 3.85
KCNC4-207ENST00000489935 MAGI3Q5TCQ9 1506 aa39.1■■■■□ 3.85
KCNC4-207ENST00000489935 EHBP1L1Q8N3D4 1523 aa39.1■■■■□ 3.85
KCNC4-207ENST00000489935 ZNF316A6NFI3 1004 aaPredicted RBP39.09■■■■□ 3.85
KCNC4-207ENST00000489935 SUPT6HQ7KZ85 1726 aaKnown RBP39.09■■■■□ 3.85
KCNC4-207ENST00000489935 KIAA0556O60303 1618 aa39.08■■■■□ 3.85
KCNC4-207ENST00000489935 CHMP7Q8WUX9 453 aaPredicted RBP39.08■■■■□ 3.85
KCNC4-207ENST00000489935 EPRSP07814 1512 aaKnown RBP39.06■■■■□ 3.84
KCNC4-207ENST00000489935 CEP170Q5SW79 1584 aa39.04■■■■□ 3.84
KCNC4-207ENST00000489935 DIEXFQ68CQ4 756 aaKnown RBP39.03■■■■□ 3.84
KCNC4-207ENST00000489935 MYOM3Q5VTT5 1437 aa39■■■■□ 3.83
KCNC4-207ENST00000489935 ARHGEF11O15085 1522 aa38.99■■■■□ 3.83
KCNC4-207ENST00000489935 FBLN2P98095 1184 aa38.97■■■■□ 3.83
KCNC4-207ENST00000489935 CDK13Q14004 1512 aaKnown RBP38.97■■■■□ 3.83
KCNC4-207ENST00000489935 MAPKBP1O60336 1514 aa38.89■■■■□ 3.82
KCNC4-207ENST00000489935 NUP160Q12769 1436 aa38.89■■■■□ 3.82
KCNC4-207ENST00000489935 ARID3CA6NKF2 412 aa38.88■■■■□ 3.82
KCNC4-207ENST00000489935 PTPRKQ15262 1439 aa38.86■■■■□ 3.81
KCNC4-207ENST00000489935 PTPN23Q9H3S7 1636 aa38.84■■■■□ 3.81
KCNC4-207ENST00000489935 RAPGEF6Q8TEU7 1601 aa38.83■■■■□ 3.81
KCNC4-207ENST00000489935 NUP153P49790 1475 aaKnown RBP38.81■■■■□ 3.8
KCNC4-207ENST00000489935 JPH4Q96JJ6 628 aa38.77■■■■□ 3.8
KCNC4-207ENST00000489935 TCOF1Q13428 1488 aaKnown RBP38.73■■■■□ 3.79
KCNC4-207ENST00000489935 HFM1A2PYH4 1435 aa38.7■■■■□ 3.79
KCNC4-207ENST00000489935 CARMIL2Q6F5E8 1435 aa38.68■■■■□ 3.78
KCNC4-207ENST00000489935 PLB1Q6P1J6 1458 aa38.65■■■■□ 3.78
KCNC4-207ENST00000489935 MIA2Q96PC5 1412 aa38.64■■■■□ 3.78
KCNC4-207ENST00000489935 NAIPQ13075 1403 aa38.61■■■■□ 3.77
KCNC4-207ENST00000489935 SIN3AQ96ST3 1273 aa38.56■■■■□ 3.76
KCNC4-207ENST00000489935 CDK11AQ9UQ88 783 aaPredicted RBP38.56■■■■□ 3.76
KCNC4-207ENST00000489935 PRG4Q92954 1404 aaPredicted RBP38.49■■■■□ 3.75
KCNC4-207ENST00000489935 CHD1O14646 1710 aa38.48■■■■□ 3.75
KCNC4-207ENST00000489935 CHIC2Q9UKJ5 165 aa38.48■■■■□ 3.75
KCNC4-207ENST00000489935 UACAQ9BZF9 1416 aa38.48■■■■□ 3.75
KCNC4-207ENST00000489935 NEUROD1Q13562 356 aa38.47■■■■□ 3.75
KCNC4-207ENST00000489935 TROQ12816 1431 aaPredicted RBP38.47■■■■□ 3.75
KCNC4-207ENST00000489935 RRP7BPQ9NSQ0 103 aa38.45■■■■□ 3.75
KCNC4-207ENST00000489935 ABCA8O94911 1581 aa38.45■■■■□ 3.75
KCNC4-207ENST00000489935 GCC2Q8IWJ2 1684 aa38.42■■■■□ 3.74
KCNC4-207ENST00000489935 AKNAQ7Z591 1439 aa38.38■■■■□ 3.73
KCNC4-207ENST00000489935 ZNF644Q9H582 1327 aaPredicted RBP38.37■■■■□ 3.73
KCNC4-207ENST00000489935 ADCY10Q96PN6 1610 aa38.36■■■■□ 3.73
KCNC4-207ENST00000489935 TIMELESSQ9UNS1 1208 aa38.35■■■■□ 3.73
KCNC4-207ENST00000489935 KIF14Q15058 1648 aa38.34■■■■□ 3.73
KCNC4-207ENST00000489935 MIER1Q8N108 512 aa38.33■■■■□ 3.73
KCNC4-207ENST00000489935 DAPK1P53355 1430 aa38.32■■■■□ 3.73
KCNC4-207ENST00000489935 KDM6BO15054 1643 aa38.32■■■■□ 3.72
KCNC4-207ENST00000489935 DNMT1P26358 1616 aaKnown RBP38.31■■■■□ 3.72
KCNC4-207ENST00000489935 ATP10BO94823 1461 aa38.31■■■■□ 3.72
KCNC4-207ENST00000489935 ABCC5O15440 1437 aa38.3■■■■□ 3.72
KCNC4-207ENST00000489935 GPATCH8Q9UKJ3 1502 aaKnown RBP38.27■■■■□ 3.72
KCNC4-207ENST00000489935 ITSN2Q9NZM3 1697 aa38.26■■■■□ 3.72
KCNC4-207ENST00000489935 PTPRGP23470 1445 aa38.26■■■■□ 3.71
KCNC4-207ENST00000489935 CFDP1Q9UEE9 299 aaPredicted RBP38.22■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms