RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 CARMIL1Q5VZK9 1371 aa18.79■□□□□ 0.6
GGA1-222ENST00000489772 CUL7Q14999 1698 aa18.78■□□□□ 0.6
GGA1-222ENST00000489772 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
GGA1-222ENST00000489772 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
GGA1-222ENST00000489772 PRG4Q92954 1404 aaPredicted RBP18.68■□□□□ 0.58
GGA1-222ENST00000489772 KIAA0586Q9BVV6 1533 aa18.68■□□□□ 0.58
GGA1-222ENST00000489772 SHROOM2Q13796 1616 aa18.68■□□□□ 0.58
GGA1-222ENST00000489772 ERCC6L2Q5T890 1561 aa18.66■□□□□ 0.58
GGA1-222ENST00000489772 RAPGEF2Q9Y4G8 1499 aa18.65■□□□□ 0.58
GGA1-222ENST00000489772 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
GGA1-222ENST00000489772 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
GGA1-222ENST00000489772 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
GGA1-222ENST00000489772 EEA1Q15075 1411 aa18.54■□□□□ 0.56
GGA1-222ENST00000489772 TRHP20396 242 aaPredicted RBP18.54■□□□□ 0.56
GGA1-222ENST00000489772 IQGAP2Q13576 1575 aa18.53■□□□□ 0.56
GGA1-222ENST00000489772 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.55
GGA1-222ENST00000489772 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
GGA1-222ENST00000489772 PTPRGP23470 1445 aa18.47■□□□□ 0.55
GGA1-222ENST00000489772 TNIKQ9UKE5 1360 aa18.45■□□□□ 0.54
GGA1-222ENST00000489772 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
GGA1-222ENST00000489772 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
GGA1-222ENST00000489772 NPM1P06748 294 aaKnown RBP eCLIP18.43■□□□□ 0.54
GGA1-222ENST00000489772 DISP1Q96F81 1524 aa18.42■□□□□ 0.54
GGA1-222ENST00000489772 MSH5O43196 834 aa18.38■□□□□ 0.53
GGA1-222ENST00000489772 GOLGA3Q08378 1498 aa18.36■□□□□ 0.53
GGA1-222ENST00000489772 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
GGA1-222ENST00000489772 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
GGA1-222ENST00000489772 ADCY10Q96PN6 1610 aa18.34■□□□□ 0.53
GGA1-222ENST00000489772 UACAQ9BZF9 1416 aa18.32■□□□□ 0.52
GGA1-222ENST00000489772 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
GGA1-222ENST00000489772 KIF21BO75037 1637 aa18.28■□□□□ 0.52
GGA1-222ENST00000489772 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
GGA1-222ENST00000489772 ABCC2Q92887 1545 aa18.27■□□□□ 0.52
GGA1-222ENST00000489772 P3H3Q8IVL6 736 aa18.26■□□□□ 0.51
GGA1-222ENST00000489772 UBTFP17480 764 aaKnown RBP18.25■□□□□ 0.51
GGA1-222ENST00000489772 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
GGA1-222ENST00000489772 FAM69CQ0P6D2 419 aa18.25■□□□□ 0.51
GGA1-222ENST00000489772 EHMT2Q96KQ7 1210 aa18.25■□□□□ 0.51
GGA1-222ENST00000489772 ABCC10Q5T3U5 1492 aa18.23■□□□□ 0.51
GGA1-222ENST00000489772 PLB1Q6P1J6 1458 aa18.21■□□□□ 0.51
GGA1-222ENST00000489772 KDM5BQ9UGL1 1544 aa18.2■□□□□ 0.5
GGA1-222ENST00000489772 ASXL2Q76L83 1435 aa18.19■□□□□ 0.5
GGA1-222ENST00000489772 SAMD9Q5K651 1589 aa18.18■□□□□ 0.5
GGA1-222ENST00000489772 ABCA8O94911 1581 aa18.15■□□□□ 0.5
GGA1-222ENST00000489772 DIP2BQ9P265 1576 aa18.14■□□□□ 0.49
GGA1-222ENST00000489772 FHOD3Q2V2M9 1422 aa18.13■□□□□ 0.49
GGA1-222ENST00000489772 EFCAB5A4FU69 1503 aa18.12■□□□□ 0.49
GGA1-222ENST00000489772 KIF13AQ9H1H9 1805 aa18.11■□□□□ 0.49
GGA1-222ENST00000489772 ZCCHC11Q5TAX3 1644 aaKnown RBP18.1■□□□□ 0.49
GGA1-222ENST00000489772 ARID3CA6NKF2 412 aa18.08■□□□□ 0.49
GGA1-222ENST00000489772 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
GGA1-222ENST00000489772 WDR7Q9Y4E6 1490 aa18.07■□□□□ 0.48
GGA1-222ENST00000489772 EPRSP07814 1512 aaKnown RBP18.06■□□□□ 0.48
GGA1-222ENST00000489772 GLI2P10070 1586 aa18.05■□□□□ 0.48
GGA1-222ENST00000489772 ATP10BO94823 1461 aa18.04■□□□□ 0.48
GGA1-222ENST00000489772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
GGA1-222ENST00000489772 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
GGA1-222ENST00000489772 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
GGA1-222ENST00000489772 RAPGEF6Q8TEU7 1601 aa18.03■□□□□ 0.48
GGA1-222ENST00000489772 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
GGA1-222ENST00000489772 NUP153P49790 1475 aaKnown RBP18■□□□□ 0.47
GGA1-222ENST00000489772 FMN1Q68DA7 1419 aa18■□□□□ 0.47
GGA1-222ENST00000489772 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
GGA1-222ENST00000489772 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
GGA1-222ENST00000489772 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
GGA1-222ENST00000489772 CD109Q6YHK3 1445 aa17.94■□□□□ 0.46
GGA1-222ENST00000489772 TEX14Q8IWB6 1497 aa17.93■□□□□ 0.46
GGA1-222ENST00000489772 TSPOAP1O95153 1857 aa17.93■□□□□ 0.46
GGA1-222ENST00000489772 MAP3K4Q9Y6R4 1608 aa17.92■□□□□ 0.46
GGA1-222ENST00000489772 CLIP1P30622 1438 aa17.9■□□□□ 0.46
GGA1-222ENST00000489772 KDM6BO15054 1643 aa17.89■□□□□ 0.45
GGA1-222ENST00000489772 MAGI3Q5TCQ9 1506 aa17.88■□□□□ 0.45
GGA1-222ENST00000489772 PPRC1Q5VV67 1664 aaKnown RBP17.87■□□□□ 0.45
GGA1-222ENST00000489772 CDK11AQ9UQ88 783 aaPredicted RBP17.87■□□□□ 0.45
GGA1-222ENST00000489772 HECW1Q76N89 1606 aa17.86■□□□□ 0.45
GGA1-222ENST00000489772 CFAP43Q8NDM7 1665 aa17.86■□□□□ 0.45
GGA1-222ENST00000489772 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
GGA1-222ENST00000489772 CDK13Q14004 1512 aaKnown RBP17.85■□□□□ 0.45
GGA1-222ENST00000489772 CASKIN1Q8WXD9 1431 aa17.83■□□□□ 0.44
GGA1-222ENST00000489772 LOC105371045A0A1W2PR82 267 aa17.81■□□□□ 0.44
GGA1-222ENST00000489772 ABCA9Q8IUA7 1624 aa17.81■□□□□ 0.44
GGA1-222ENST00000489772 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
GGA1-222ENST00000489772 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
GGA1-222ENST00000489772 PHLDB1Q86UU1 1377 aa17.78■□□□□ 0.44
GGA1-222ENST00000489772 CCDC18Q5T9S5 1454 aa17.76■□□□□ 0.43
GGA1-222ENST00000489772 FYCO1Q9BQS8 1478 aa17.76■□□□□ 0.43
GGA1-222ENST00000489772 ADRA2BP18089 450 aa17.76■□□□□ 0.43
GGA1-222ENST00000489772 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
GGA1-222ENST00000489772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.75■□□□□ 0.43
GGA1-222ENST00000489772 TROQ12816 1431 aaPredicted RBP17.74■□□□□ 0.43
GGA1-222ENST00000489772 NEO1Q92859 1461 aa17.74■□□□□ 0.43
GGA1-222ENST00000489772 ARAP3Q8WWN8 1544 aa17.72■□□□□ 0.43
GGA1-222ENST00000489772 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
GGA1-222ENST00000489772 FANCAO15360 1455 aa17.69■□□□□ 0.42
GGA1-222ENST00000489772 PLCH2O75038 1416 aa17.69■□□□□ 0.42
GGA1-222ENST00000489772 RAPGEF3O95398 923 aa17.67■□□□□ 0.42
GGA1-222ENST00000489772 KIF14Q15058 1648 aa17.67■□□□□ 0.42
GGA1-222ENST00000489772 AKNAQ7Z591 1439 aa17.66■□□□□ 0.42
GGA1-222ENST00000489772 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
GGA1-222ENST00000489772 LRRIQ1Q96JM4 1722 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms