RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 RUSC2Q8N2Y8 1516 aa39.7■■■■□ 3.95
HOXA9-205ENST00000489695 ABCC10Q5T3U5 1492 aa39.58■■■■□ 3.93
HOXA9-205ENST00000489695 NPM1P06748 294 aaKnown RBP eCLIP39.55■■■■□ 3.92
HOXA9-205ENST00000489695 MAPKBP1O60336 1514 aa39.55■■■■□ 3.92
HOXA9-205ENST00000489695 FAM69CQ0P6D2 419 aa39.54■■■■□ 3.92
HOXA9-205ENST00000489695 KIAA0586Q9BVV6 1533 aa39.5■■■■□ 3.91
HOXA9-205ENST00000489695 IGF1RP08069 1367 aa39.49■■■■□ 3.91
HOXA9-205ENST00000489695 ADCY10Q96PN6 1610 aa39.47■■■■□ 3.91
HOXA9-205ENST00000489695 DIP2BQ9P265 1576 aa39.42■■■■□ 3.9
HOXA9-205ENST00000489695 KIF27Q86VH2 1401 aa39.4■■■■□ 3.9
HOXA9-205ENST00000489695 CUL7Q14999 1698 aa39.36■■■■□ 3.89
HOXA9-205ENST00000489695 PTPRGP23470 1445 aa39.21■■■■□ 3.87
HOXA9-205ENST00000489695 CARMIL1Q5VZK9 1371 aa39.19■■■■□ 3.86
HOXA9-205ENST00000489695 KDM6BO15054 1643 aa39.18■■■■□ 3.86
HOXA9-205ENST00000489695 TNIKQ9UKE5 1360 aa39.1■■■■□ 3.85
HOXA9-205ENST00000489695 CARMIL2Q6F5E8 1435 aa39.09■■■■□ 3.85
HOXA9-205ENST00000489695 KDM4FA0A1W2PPD8 638 aa39.07■■■■□ 3.85
HOXA9-205ENST00000489695 ABCC2Q92887 1545 aa39.07■■■■□ 3.84
HOXA9-205ENST00000489695 TSPOAP1O95153 1857 aa39.07■■■■□ 3.84
HOXA9-205ENST00000489695 TTBK1Q5TCY1 1321 aaPredicted RBP39.01■■■■□ 3.84
HOXA9-205ENST00000489695 IQGAP2Q13576 1575 aa38.99■■■■□ 3.83
HOXA9-205ENST00000489695 UHRF1BP1LA0JNW5 1464 aa38.97■■■■□ 3.83
HOXA9-205ENST00000489695 PLB1Q6P1J6 1458 aa38.97■■■■□ 3.83
HOXA9-205ENST00000489695 ASXL2Q76L83 1435 aa38.97■■■■□ 3.83
HOXA9-205ENST00000489695 GLI2P10070 1586 aa38.93■■■■□ 3.82
HOXA9-205ENST00000489695 UACAQ9BZF9 1416 aa38.89■■■■□ 3.82
HOXA9-205ENST00000489695 DISP1Q96F81 1524 aa38.89■■■■□ 3.82
HOXA9-205ENST00000489695 PPRC1Q5VV67 1664 aaKnown RBP38.84■■■■□ 3.81
HOXA9-205ENST00000489695 KDM5BQ9UGL1 1544 aa38.79■■■■□ 3.8
HOXA9-205ENST00000489695 UGGT2Q9NYU1 1516 aa38.78■■■■□ 3.8
HOXA9-205ENST00000489695 RAPGEF2Q9Y4G8 1499 aa38.76■■■■□ 3.8
HOXA9-205ENST00000489695 EPRSP07814 1512 aaKnown RBP38.73■■■■□ 3.79
HOXA9-205ENST00000489695 COL17A1Q9UMD9 1497 aaPredicted RBP38.68■■■■□ 3.78
HOXA9-205ENST00000489695 MAP3K4Q9Y6R4 1608 aa38.67■■■■□ 3.78
HOXA9-205ENST00000489695 KIAA0556O60303 1618 aa38.64■■■■□ 3.78
HOXA9-205ENST00000489695 ZCCHC11Q5TAX3 1644 aaKnown RBP38.63■■■■□ 3.78
HOXA9-205ENST00000489695 ADGRL1O94910 1474 aa38.6■■■■□ 3.77
HOXA9-205ENST00000489695 TEX14Q8IWB6 1497 aa38.6■■■■□ 3.77
HOXA9-205ENST00000489695 WDR7Q9Y4E6 1490 aa38.51■■■■□ 3.76
HOXA9-205ENST00000489695 GOLGA3Q08378 1498 aa38.41■■■■□ 3.74
HOXA9-205ENST00000489695 CTTNBP2Q8WZ74 1663 aa38.39■■■■□ 3.74
HOXA9-205ENST00000489695 ABCA8O94911 1581 aa38.36■■■■□ 3.73
HOXA9-205ENST00000489695 MAGI3Q5TCQ9 1506 aa38.34■■■■□ 3.73
HOXA9-205ENST00000489695 CD109Q6YHK3 1445 aa38.33■■■■□ 3.73
HOXA9-205ENST00000489695 ILDR1Q86SU0 546 aaPredicted RBP38.32■■■■□ 3.72
HOXA9-205ENST00000489695 CFAP43Q8NDM7 1665 aa38.28■■■■□ 3.72
HOXA9-205ENST00000489695 PRXQ9BXM0 1461 aa38.28■■■■□ 3.72
HOXA9-205ENST00000489695 KCNH8Q96L42 1107 aa38.27■■■■□ 3.72
HOXA9-205ENST00000489695 HECW2Q9P2P5 1572 aa38.21■■■■□ 3.71
HOXA9-205ENST00000489695 ARAP3Q8WWN8 1544 aa38.07■■■■□ 3.69
HOXA9-205ENST00000489695 ATP10BO94823 1461 aa38.06■■■■□ 3.68
HOXA9-205ENST00000489695 FAM9AQ8IZU1 332 aaPredicted RBP38.04■■■■□ 3.68
HOXA9-205ENST00000489695 P3H3Q8IVL6 736 aa37.99■■■■□ 3.67
HOXA9-205ENST00000489695 ARID3CA6NKF2 412 aa37.98■■■■□ 3.67
HOXA9-205ENST00000489695 KIF21BO75037 1637 aa37.97■■■■□ 3.67
HOXA9-205ENST00000489695 PHLDB1Q86UU1 1377 aa37.95■■■■□ 3.67
HOXA9-205ENST00000489695 ABCA9Q8IUA7 1624 aa37.93■■■■□ 3.66
HOXA9-205ENST00000489695 SAMD9Q5K651 1589 aa37.89■■■■□ 3.66
HOXA9-205ENST00000489695 CSRNP3Q8WYN3 585 aa37.84■■■■□ 3.65
HOXA9-205ENST00000489695 NEO1Q92859 1461 aa37.82■■■■□ 3.64
HOXA9-205ENST00000489695 RAPGEF6Q8TEU7 1601 aa37.81■■■■□ 3.64
HOXA9-205ENST00000489695 RAPGEF3O95398 923 aa37.8■■■■□ 3.64
HOXA9-205ENST00000489695 ADAMTSL3P82987 1691 aa37.75■■■■□ 3.63
HOXA9-205ENST00000489695 PTPRMP28827 1452 aa37.73■■■■□ 3.63
HOXA9-205ENST00000489695 NUP153P49790 1475 aaKnown RBP37.72■■■■□ 3.63
HOXA9-205ENST00000489695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.71■■■■□ 3.63
HOXA9-205ENST00000489695 HNRNPUL2Q1KMD3 747 aaKnown RBP37.71■■■■□ 3.63
HOXA9-205ENST00000489695 FRMPD1Q5SYB0 1578 aa37.68■■■■□ 3.62
HOXA9-205ENST00000489695 BCORL1Q5H9F3 1711 aa37.6■■■■□ 3.61
HOXA9-205ENST00000489695 FHOD3Q2V2M9 1422 aa37.6■■■■□ 3.61
HOXA9-205ENST00000489695 EEA1Q15075 1411 aa37.59■■■■□ 3.61
HOXA9-205ENST00000489695 PLEKHD1A6NEE1 506 aa37.56■■■■□ 3.6
HOXA9-205ENST00000489695 ARID4BQ4LE39 1312 aaPredicted RBP37.55■■■■□ 3.6
HOXA9-205ENST00000489695 RANGAP1P46060 587 aaPredicted RBP37.54■■■■□ 3.6
HOXA9-205ENST00000489695 FBXO41Q8TF61 875 aa37.53■■■■□ 3.6
HOXA9-205ENST00000489695 DENND4BO75064 1496 aaPredicted RBP37.52■■■■□ 3.6
HOXA9-205ENST00000489695 MADDQ8WXG6 1647 aa37.52■■■■□ 3.6
HOXA9-205ENST00000489695 ARHGEF40Q8TER5 1519 aa37.51■■■■□ 3.59
HOXA9-205ENST00000489695 AKNAQ7Z591 1439 aa37.5■■■■□ 3.59
HOXA9-205ENST00000489695 RICTORQ6R327 1708 aa37.47■■■■□ 3.59
HOXA9-205ENST00000489695 FANCAO15360 1455 aa37.46■■■■□ 3.59
HOXA9-205ENST00000489695 PCF11O94913 1555 aaKnown RBP37.46■■■■□ 3.59
HOXA9-205ENST00000489695 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.46■■■■□ 3.59
HOXA9-205ENST00000489695 LMTK3Q96Q04 1460 aa37.44■■■■□ 3.58
HOXA9-205ENST00000489695 CFAP74Q9C0B2 1584 aa37.42■■■■□ 3.58
HOXA9-205ENST00000489695 EFCAB5A4FU69 1503 aa37.41■■■■□ 3.58
HOXA9-205ENST00000489695 ZMYM4Q5VZL5 1548 aa37.37■■■■□ 3.57
HOXA9-205ENST00000489695 TTC37Q6PGP7 1564 aa37.37■■■■□ 3.57
HOXA9-205ENST00000489695 RIMS1Q86UR5 1692 aaKnown RBP37.34■■■■□ 3.57
HOXA9-205ENST00000489695 POGZQ7Z3K3 1410 aa37.32■■■■□ 3.56
HOXA9-205ENST00000489695 MAGI2Q86UL8 1455 aa37.31■■■■□ 3.56
HOXA9-205ENST00000489695 ZFYVE16Q7Z3T8 1539 aa37.3■■■■□ 3.56
HOXA9-205ENST00000489695 YEATS2Q9ULM3 1422 aa37.29■■■■□ 3.56
HOXA9-205ENST00000489695 CDK13Q14004 1512 aaKnown RBP37.26■■■■□ 3.56
HOXA9-205ENST00000489695 PLCH2O75038 1416 aa37.25■■■■□ 3.55
HOXA9-205ENST00000489695 SIGLEC1Q9BZZ2 1709 aa37.24■■■■□ 3.55
HOXA9-205ENST00000489695 HECW1Q76N89 1606 aa37.21■■■■□ 3.55
HOXA9-205ENST00000489695 SCAPERQ9BY12 1400 aa37.2■■■■□ 3.55
HOXA9-205ENST00000489695 HSPA2P54652 639 aa37.18■■■■□ 3.54
HOXA9-205ENST00000489695 PLPPR3Q6T4P5 718 aa37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms