RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 KIF27Q86VH2 1401 aa20.88■□□□□ 0.93
SFXN3-207ENST00000489434 NPM1P06748 294 aaKnown RBP eCLIP20.88■□□□□ 0.93
SFXN3-207ENST00000489434 IGF1RP08069 1367 aa20.84■□□□□ 0.93
SFXN3-207ENST00000489434 CUL7Q14999 1698 aa20.83■□□□□ 0.93
SFXN3-207ENST00000489434 KIAA0586Q9BVV6 1533 aa20.82■□□□□ 0.92
SFXN3-207ENST00000489434 KIF13AQ9H1H9 1805 aa20.81■□□□□ 0.92
SFXN3-207ENST00000489434 FAM69CQ0P6D2 419 aa20.76■□□□□ 0.91
SFXN3-207ENST00000489434 MAPKBP1O60336 1514 aa20.74■□□□□ 0.91
SFXN3-207ENST00000489434 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
SFXN3-207ENST00000489434 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
SFXN3-207ENST00000489434 ADCY10Q96PN6 1610 aa20.72■□□□□ 0.91
SFXN3-207ENST00000489434 PTPRGP23470 1445 aa20.68■□□□□ 0.9
SFXN3-207ENST00000489434 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
SFXN3-207ENST00000489434 DIP2BQ9P265 1576 aa20.66■□□□□ 0.9
SFXN3-207ENST00000489434 TTBK1Q5TCY1 1321 aaPredicted RBP20.63■□□□□ 0.89
SFXN3-207ENST00000489434 TNIKQ9UKE5 1360 aa20.62■□□□□ 0.89
SFXN3-207ENST00000489434 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
SFXN3-207ENST00000489434 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
SFXN3-207ENST00000489434 ABCC2Q92887 1545 aa20.55■□□□□ 0.88
SFXN3-207ENST00000489434 KDM6BO15054 1643 aa20.54■□□□□ 0.88
SFXN3-207ENST00000489434 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
SFXN3-207ENST00000489434 PLB1Q6P1J6 1458 aa20.51■□□□□ 0.87
SFXN3-207ENST00000489434 UHRF1BP1LA0JNW5 1464 aa20.5■□□□□ 0.87
SFXN3-207ENST00000489434 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
SFXN3-207ENST00000489434 UACAQ9BZF9 1416 aa20.49■□□□□ 0.87
SFXN3-207ENST00000489434 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
SFXN3-207ENST00000489434 UGGT2Q9NYU1 1516 aa20.46■□□□□ 0.87
SFXN3-207ENST00000489434 GLI2P10070 1586 aa20.43■□□□□ 0.86
SFXN3-207ENST00000489434 KDM5BQ9UGL1 1544 aa20.4■□□□□ 0.86
SFXN3-207ENST00000489434 KIAA0556O60303 1618 aa20.39■□□□□ 0.86
SFXN3-207ENST00000489434 KDM4FA0A1W2PPD8 638 aa20.35■□□□□ 0.85
SFXN3-207ENST00000489434 EPRSP07814 1512 aaKnown RBP20.35■□□□□ 0.85
SFXN3-207ENST00000489434 GOLGA3Q08378 1498 aa20.35■□□□□ 0.85
SFXN3-207ENST00000489434 CTTNBP2Q8WZ74 1663 aa20.35■□□□□ 0.85
SFXN3-207ENST00000489434 ZCCHC11Q5TAX3 1644 aaKnown RBP20.35■□□□□ 0.85
SFXN3-207ENST00000489434 PPRC1Q5VV67 1664 aaKnown RBP20.34■□□□□ 0.85
SFXN3-207ENST00000489434 TEX14Q8IWB6 1497 aa20.33■□□□□ 0.85
SFXN3-207ENST00000489434 MAP3K4Q9Y6R4 1608 aa20.31■□□□□ 0.84
SFXN3-207ENST00000489434 FAM9AQ8IZU1 332 aaPredicted RBP20.3■□□□□ 0.84
SFXN3-207ENST00000489434 WDR7Q9Y4E6 1490 aa20.29■□□□□ 0.84
SFXN3-207ENST00000489434 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
SFXN3-207ENST00000489434 COL17A1Q9UMD9 1497 aaPredicted RBP20.21■□□□□ 0.83
SFXN3-207ENST00000489434 ABCA8O94911 1581 aa20.21■□□□□ 0.83
SFXN3-207ENST00000489434 KCNH8Q96L42 1107 aa20.2■□□□□ 0.82
SFXN3-207ENST00000489434 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
SFXN3-207ENST00000489434 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
SFXN3-207ENST00000489434 CFAP43Q8NDM7 1665 aa20.16■□□□□ 0.82
SFXN3-207ENST00000489434 MAGI3Q5TCQ9 1506 aa20.15■□□□□ 0.82
SFXN3-207ENST00000489434 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
SFXN3-207ENST00000489434 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
SFXN3-207ENST00000489434 ARID3CA6NKF2 412 aa20.08■□□□□ 0.81
SFXN3-207ENST00000489434 ATP10BO94823 1461 aa20.05■□□□□ 0.8
SFXN3-207ENST00000489434 EEA1Q15075 1411 aa20.03■□□□□ 0.8
SFXN3-207ENST00000489434 SAMD9Q5K651 1589 aa20.03■□□□□ 0.8
SFXN3-207ENST00000489434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
SFXN3-207ENST00000489434 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
SFXN3-207ENST00000489434 PHLDB1Q86UU1 1377 aa20.01■□□□□ 0.79
SFXN3-207ENST00000489434 RAPGEF6Q8TEU7 1601 aa20■□□□□ 0.79
SFXN3-207ENST00000489434 ARAP3Q8WWN8 1544 aa20■□□□□ 0.79
SFXN3-207ENST00000489434 ABCA9Q8IUA7 1624 aa19.98■□□□□ 0.79
SFXN3-207ENST00000489434 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
SFXN3-207ENST00000489434 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
SFXN3-207ENST00000489434 KIF21BO75037 1637 aa19.93■□□□□ 0.78
SFXN3-207ENST00000489434 NEO1Q92859 1461 aa19.92■□□□□ 0.78
SFXN3-207ENST00000489434 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
SFXN3-207ENST00000489434 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
SFXN3-207ENST00000489434 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
SFXN3-207ENST00000489434 RAPGEF3O95398 923 aa19.88■□□□□ 0.77
SFXN3-207ENST00000489434 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
SFXN3-207ENST00000489434 ILDR1Q86SU0 546 aaPredicted RBP19.86■□□□□ 0.77
SFXN3-207ENST00000489434 ARID4BQ4LE39 1312 aaPredicted RBP19.81■□□□□ 0.76
SFXN3-207ENST00000489434 CFAP74Q9C0B2 1584 aa19.78■□□□□ 0.76
SFXN3-207ENST00000489434 DENND4BO75064 1496 aaPredicted RBP19.78■□□□□ 0.76
SFXN3-207ENST00000489434 UBTFP17480 764 aaKnown RBP19.77■□□□□ 0.76
SFXN3-207ENST00000489434 FANCAO15360 1455 aa19.77■□□□□ 0.76
SFXN3-207ENST00000489434 PTPRMP28827 1452 aa19.77■□□□□ 0.76
SFXN3-207ENST00000489434 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.76
SFXN3-207ENST00000489434 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.76
SFXN3-207ENST00000489434 AKNAQ7Z591 1439 aa19.76■□□□□ 0.75
SFXN3-207ENST00000489434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.75
SFXN3-207ENST00000489434 BCORL1Q5H9F3 1711 aa19.73■□□□□ 0.75
SFXN3-207ENST00000489434 ARHGEF40Q8TER5 1519 aa19.72■□□□□ 0.75
SFXN3-207ENST00000489434 RICTORQ6R327 1708 aa19.72■□□□□ 0.75
SFXN3-207ENST00000489434 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
SFXN3-207ENST00000489434 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
SFXN3-207ENST00000489434 FMN1Q68DA7 1419 aa19.71■□□□□ 0.75
SFXN3-207ENST00000489434 EHMT2Q96KQ7 1210 aa19.7■□□□□ 0.74
SFXN3-207ENST00000489434 CDK11AQ9UQ88 783 aaPredicted RBP19.7■□□□□ 0.74
SFXN3-207ENST00000489434 CDK13Q14004 1512 aaKnown RBP19.7■□□□□ 0.74
SFXN3-207ENST00000489434 POGZQ7Z3K3 1410 aa19.69■□□□□ 0.74
SFXN3-207ENST00000489434 MADDQ8WXG6 1647 aa19.69■□□□□ 0.74
SFXN3-207ENST00000489434 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
SFXN3-207ENST00000489434 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
SFXN3-207ENST00000489434 MAGI2Q86UL8 1455 aa19.66■□□□□ 0.74
SFXN3-207ENST00000489434 PLCH2O75038 1416 aa19.65■□□□□ 0.74
SFXN3-207ENST00000489434 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
SFXN3-207ENST00000489434 EFCAB2Q5VUJ9 269 aa19.63■□□□□ 0.73
SFXN3-207ENST00000489434 SCAPERQ9BY12 1400 aa19.62■□□□□ 0.73
SFXN3-207ENST00000489434 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
SFXN3-207ENST00000489434 PCF11O94913 1555 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms