RNA–Protein interactions for RNA: ENST00000489171.5

RASSF4-211, Transcript of Ras association domain family member 4, humanhuman

TSL 1 (best)

Gene RASSF4, Length 4,350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-211ENST00000489171 CEP162Q5TB80 1403 aa25.33■■□□□ 1.64
RASSF4-211ENST00000489171 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
RASSF4-211ENST00000489171 PLPPR3Q6T4P5 718 aa25.25■■□□□ 1.63
RASSF4-211ENST00000489171 RGL3Q3MIN7 710 aa25.24■■□□□ 1.63
RASSF4-211ENST00000489171 SIN3AQ96ST3 1273 aa25.23■■□□□ 1.63
RASSF4-211ENST00000489171 GLIPR1L2Q4G1C9 344 aa25.22■■□□□ 1.63
RASSF4-211ENST00000489171 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
RASSF4-211ENST00000489171 NPM1P06748 294 aaKnown RBP eCLIP25.17■■□□□ 1.62
RASSF4-211ENST00000489171 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
RASSF4-211ENST00000489171 GOLGA3Q08378 1498 aa25.11■■□□□ 1.61
RASSF4-211ENST00000489171 EEA1Q15075 1411 aa25.09■■□□□ 1.61
RASSF4-211ENST00000489171 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
RASSF4-211ENST00000489171 DDRGK1Q96HY6 314 aa25.07■■□□□ 1.6
RASSF4-211ENST00000489171 BECN1Q14457 450 aa25.07■■□□□ 1.6
RASSF4-211ENST00000489171 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
RASSF4-211ENST00000489171 B4GALNT3Q6L9W6 998 aa25.05■■□□□ 1.6
RASSF4-211ENST00000489171 MYH16Q9H6N6 1097 aa25.05■■□□□ 1.6
RASSF4-211ENST00000489171 PPP4R2Q9NY27 417 aa25.05■■□□□ 1.6
RASSF4-211ENST00000489171 CARD11Q9BXL7 1154 aa25.03■■□□□ 1.6
RASSF4-211ENST00000489171 KCNH8Q96L42 1107 aa25.02■■□□□ 1.6
RASSF4-211ENST00000489171 LAS1LQ9Y4W2 734 aaKnown RBP25.01■■□□□ 1.59
RASSF4-211ENST00000489171 NEUROD2Q15784 382 aa25■■□□□ 1.59
RASSF4-211ENST00000489171 WRNQ14191 1432 aaPredicted RBP eCLIP24.99■■□□□ 1.59
RASSF4-211ENST00000489171 PLEKHD1A6NEE1 506 aa24.98■■□□□ 1.59
RASSF4-211ENST00000489171 RGS3P49796 1198 aa24.98■■□□□ 1.59
RASSF4-211ENST00000489171 TRIM44Q96DX7 344 aaPredicted RBP24.98■■□□□ 1.59
RASSF4-211ENST00000489171 KNSTRNQ9Y448 316 aa24.98■■□□□ 1.59
RASSF4-211ENST00000489171 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
RASSF4-211ENST00000489171 CFDP1Q9UEE9 299 aaPredicted RBP24.96■■□□□ 1.59
RASSF4-211ENST00000489171 PPM1GO15355 546 aaPredicted RBP24.94■■□□□ 1.58
RASSF4-211ENST00000489171 CCDC180Q9P1Z9 1646 aa24.93■■□□□ 1.58
RASSF4-211ENST00000489171 PLEKHG5O94827 1062 aa24.91■■□□□ 1.58
RASSF4-211ENST00000489171 NOP58Q9Y2X3 529 aaKnown RBP24.89■■□□□ 1.57
RASSF4-211ENST00000489171 GOLGA6L22H0YM25 854 aa24.88■■□□□ 1.57
RASSF4-211ENST00000489171 NCLP19338 710 aaKnown RBP24.88■■□□□ 1.57
RASSF4-211ENST00000489171 CFAP53Q96M91 514 aa24.85■■□□□ 1.57
RASSF4-211ENST00000489171 FRAT1Q92837 279 aaPredicted RBP24.84■■□□□ 1.57
RASSF4-211ENST00000489171 CDCA8Q53HL2 280 aa24.84■■□□□ 1.57
RASSF4-211ENST00000489171 FTSJ3Q8IY81 847 aaKnown RBP24.83■■□□□ 1.57
RASSF4-211ENST00000489171 RBM19Q9Y4C8 960 aaKnown RBP24.83■■□□□ 1.56
RASSF4-211ENST00000489171 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
RASSF4-211ENST00000489171 ERICH6BQ5W0A0 696 aa24.82■■□□□ 1.56
RASSF4-211ENST00000489171 CCNB3Q8WWL7 1395 aa24.8■■□□□ 1.56
RASSF4-211ENST00000489171 KIF27Q86VH2 1401 aa24.79■■□□□ 1.56
RASSF4-211ENST00000489171 CC2D1BQ5T0F9 858 aaKnown RBP24.79■■□□□ 1.56
RASSF4-211ENST00000489171 TNNT2P45379 298 aaPredicted RBP24.79■■□□□ 1.56
RASSF4-211ENST00000489171 PPP1R15AO75807 674 aaPredicted RBP24.76■■□□□ 1.55
RASSF4-211ENST00000489171 C14orf37Q86TY3 774 aa24.76■■□□□ 1.55
RASSF4-211ENST00000489171 TPRNQ4KMQ1 711 aa24.76■■□□□ 1.55
RASSF4-211ENST00000489171 ZBTB7CA1YPR0 619 aa24.75■■□□□ 1.55
RASSF4-211ENST00000489171 PTMAP06454 111 aaKnown RBP24.71■■□□□ 1.55
RASSF4-211ENST00000489171 CCER2I3L3R5 266 aa24.7■■□□□ 1.54
RASSF4-211ENST00000489171 TIMELESSQ9UNS1 1208 aa24.7■■□□□ 1.54
RASSF4-211ENST00000489171 A0A0G2JS52 829 aa24.69■■□□□ 1.54
RASSF4-211ENST00000489171 DCAF11Q8TEB1 546 aa24.69■■□□□ 1.54
RASSF4-211ENST00000489171 SOGA1O94964 1423 aa24.68■■□□□ 1.54
RASSF4-211ENST00000489171 MAPK8IP3Q9UPT6 1336 aa24.66■■□□□ 1.54
RASSF4-211ENST00000489171 DNTTIP2Q5QJE6 756 aaKnown RBP24.65■■□□□ 1.54
RASSF4-211ENST00000489171 DEKP35659 375 aaKnown RBP24.65■■□□□ 1.54
RASSF4-211ENST00000489171 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
RASSF4-211ENST00000489171 NAP1L5Q96NT1 182 aaPredicted RBP24.64■■□□□ 1.54
RASSF4-211ENST00000489171 NUDCQ9Y266 331 aa24.63■■□□□ 1.53
RASSF4-211ENST00000489171 HSPA5P11021 654 aaKnown RBP24.63■■□□□ 1.53
RASSF4-211ENST00000489171 U2SURPO15042 1029 aaKnown RBP24.62■■□□□ 1.53
RASSF4-211ENST00000489171 PLCB2Q00722 1185 aa24.58■■□□□ 1.53
RASSF4-211ENST00000489171 FOXD1Q16676 465 aa24.57■■□□□ 1.52
RASSF4-211ENST00000489171 CASC1Q6TDU7 716 aa24.56■■□□□ 1.52
RASSF4-211ENST00000489171 TSHZ2Q9NRE2 1034 aa24.55■■□□□ 1.52
RASSF4-211ENST00000489171 TMF1P82094 1093 aa24.54■■□□□ 1.52
RASSF4-211ENST00000489171 BAZ1BQ9UIG0 1483 aaKnown RBP24.54■■□□□ 1.52
RASSF4-211ENST00000489171 POGKQ9P215 609 aa24.54■■□□□ 1.52
RASSF4-211ENST00000489171 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
RASSF4-211ENST00000489171 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
RASSF4-211ENST00000489171 ZRSR1Q15695 479 aaKnown RBP24.52■■□□□ 1.51
RASSF4-211ENST00000489171 SPRYD3Q8NCJ5 442 aa24.5■■□□□ 1.51
RASSF4-211ENST00000489171 SETD5Q9C0A6 1442 aa24.5■■□□□ 1.51
RASSF4-211ENST00000489171 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
RASSF4-211ENST00000489171 CARMIL1Q5VZK9 1371 aa24.48■■□□□ 1.51
RASSF4-211ENST00000489171 VPS8Q8N3P4 1428 aa24.47■■□□□ 1.51
RASSF4-211ENST00000489171 MS4A1P11836 297 aa24.46■■□□□ 1.51
RASSF4-211ENST00000489171 PKD2Q13563 968 aa24.44■■□□□ 1.5
RASSF4-211ENST00000489171 RCAN3Q9UKA8 241 aa24.43■■□□□ 1.5
RASSF4-211ENST00000489171 CDK11BP21127 795 aaKnown RBP24.42■■□□□ 1.5
RASSF4-211ENST00000489171 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
RASSF4-211ENST00000489171 RAB3GAP2Q9H2M9 1393 aa24.42■■□□□ 1.5
RASSF4-211ENST00000489171 TAOK2Q9UL54 1235 aa24.41■■□□□ 1.5
RASSF4-211ENST00000489171 HSCBQ8IWL3 235 aa24.4■■□□□ 1.5
RASSF4-211ENST00000489171 CHMP4BQ9H444 224 aaKnown RBP24.4■■□□□ 1.5
RASSF4-211ENST00000489171 SAFB2Q14151 953 aaKnown RBP eCLIP24.39■■□□□ 1.49
RASSF4-211ENST00000489171 LMOD2Q6P5Q4 547 aa24.39■■□□□ 1.49
RASSF4-211ENST00000489171 MORC1Q86VD1 984 aa24.38■■□□□ 1.49
RASSF4-211ENST00000489171 SLKQ9H2G2 1235 aaPredicted RBP24.37■■□□□ 1.49
RASSF4-211ENST00000489171 ARID4BQ4LE39 1312 aaPredicted RBP24.36■■□□□ 1.49
RASSF4-211ENST00000489171 FGD1P98174 961 aa24.35■■□□□ 1.49
RASSF4-211ENST00000489171 KCNJ4P48050 445 aa24.35■■□□□ 1.49
RASSF4-211ENST00000489171 SOX12O15370 315 aa24.35■■□□□ 1.49
RASSF4-211ENST00000489171 CUX2O14529 1486 aa24.34■■□□□ 1.49
RASSF4-211ENST00000489171 OS9Q13438 667 aaPredicted RBP24.34■■□□□ 1.49
RASSF4-211ENST00000489171 MPHOSPH9Q99550 1183 aa24.34■■□□□ 1.49
RASSF4-211ENST00000489171 SRPK2P78362 688 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms