RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 WIZO95785 1651 aa10.93□□□□□ -0.66
HDLBP-243ENST00000488923 TOP2AP11388 1531 aaKnown RBP10.93□□□□□ -0.66
HDLBP-243ENST00000488923 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
HDLBP-243ENST00000488923 PEG3Q9GZU2 1588 aa10.88□□□□□ -0.67
HDLBP-243ENST00000488923 ZRANB1Q9UGI0 708 aa10.86□□□□□ -0.67
HDLBP-243ENST00000488923 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
HDLBP-243ENST00000488923 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
HDLBP-243ENST00000488923 STAG3Q9UJ98 1225 aa10.81□□□□□ -0.68
HDLBP-243ENST00000488923 CCDC88BA6NC98 1476 aa10.78□□□□□ -0.68
HDLBP-243ENST00000488923 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
HDLBP-243ENST00000488923 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
HDLBP-243ENST00000488923 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
HDLBP-243ENST00000488923 EIF4G1Q04637 1599 aaKnown RBP10.76□□□□□ -0.69
HDLBP-243ENST00000488923 ATAD2BQ9ULI0 1458 aa10.75□□□□□ -0.69
HDLBP-243ENST00000488923 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-243ENST00000488923 BAZ1BQ9UIG0 1483 aaKnown RBP10.73□□□□□ -0.69
HDLBP-243ENST00000488923 POTEMA6NI47 508 aa10.71□□□□□ -0.69
HDLBP-243ENST00000488923 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
HDLBP-243ENST00000488923 CSRNP3Q8WYN3 585 aa10.68□□□□□ -0.7
HDLBP-243ENST00000488923 HMGXB3Q12766 1538 aa10.68□□□□□ -0.7
HDLBP-243ENST00000488923 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
HDLBP-243ENST00000488923 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
HDLBP-243ENST00000488923 POTEGQ6S5H5 508 aa10.66□□□□□ -0.7
HDLBP-243ENST00000488923 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDLBP-243ENST00000488923 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
HDLBP-243ENST00000488923 EEA1Q15075 1411 aa10.64□□□□□ -0.71
HDLBP-243ENST00000488923 LOC105371045A0A1W2PR82 267 aa10.61□□□□□ -0.71
HDLBP-243ENST00000488923 MAMSTRQ6ZN01 415 aa10.6□□□□□ -0.71
HDLBP-243ENST00000488923 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
HDLBP-243ENST00000488923 C7P10643 843 aa10.57□□□□□ -0.72
HDLBP-243ENST00000488923 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
HDLBP-243ENST00000488923 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
HDLBP-243ENST00000488923 MNX1P50219 401 aaPredicted RBP10.56□□□□□ -0.72
HDLBP-243ENST00000488923 PELP1Q8IZL8 1130 aaKnown RBP10.56□□□□□ -0.72
HDLBP-243ENST00000488923 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
HDLBP-243ENST00000488923 ASTLQ6HA08 431 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-243ENST00000488923 FAM9AQ8IZU1 332 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-243ENST00000488923 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
HDLBP-243ENST00000488923 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
HDLBP-243ENST00000488923 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
HDLBP-243ENST00000488923 CFTRP13569 1480 aa10.48□□□□□ -0.73
HDLBP-243ENST00000488923 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
HDLBP-243ENST00000488923 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
HDLBP-243ENST00000488923 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
HDLBP-243ENST00000488923 TOP2BQ02880 1626 aa10.44□□□□□ -0.74
HDLBP-243ENST00000488923 TNIKQ9UKE5 1360 aa10.44□□□□□ -0.74
HDLBP-243ENST00000488923 SYNJ1O43426 1573 aa10.43□□□□□ -0.74
HDLBP-243ENST00000488923 SOGA1O94964 1423 aa10.43□□□□□ -0.74
HDLBP-243ENST00000488923 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
HDLBP-243ENST00000488923 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
HDLBP-243ENST00000488923 BIVM-ERCC5R4GMW8 1640 aa10.42□□□□□ -0.74
HDLBP-243ENST00000488923 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
HDLBP-243ENST00000488923 CC2D2AQ9P2K1 1620 aa10.41□□□□□ -0.74
HDLBP-243ENST00000488923 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
HDLBP-243ENST00000488923 CADPSQ9ULU8 1353 aa10.4□□□□□ -0.74
HDLBP-243ENST00000488923 KIF21BO75037 1637 aa10.38□□□□□ -0.75
HDLBP-243ENST00000488923 PRDM2Q13029 1718 aa10.37□□□□□ -0.75
HDLBP-243ENST00000488923 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-243ENST00000488923 CEP162Q5TB80 1403 aa10.34□□□□□ -0.75
HDLBP-243ENST00000488923 UBTFP17480 764 aaKnown RBP10.34□□□□□ -0.75
HDLBP-243ENST00000488923 HRCP23327 699 aa10.34□□□□□ -0.75
HDLBP-243ENST00000488923 ATN1P54259 1190 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-243ENST00000488923 EHMT2Q96KQ7 1210 aa10.34□□□□□ -0.75
HDLBP-243ENST00000488923 CCDC61Q9Y6R9 512 aa10.34□□□□□ -0.75
HDLBP-243ENST00000488923 RUSC2Q8N2Y8 1516 aa10.33□□□□□ -0.76
HDLBP-243ENST00000488923 TSPYL2Q9H2G4 693 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-243ENST00000488923 CUX1P39880 1505 aa10.33□□□□□ -0.76
HDLBP-243ENST00000488923 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
HDLBP-243ENST00000488923 PROM2Q8N271 834 aa10.31□□□□□ -0.76
HDLBP-243ENST00000488923 ERICH3Q5RHP9 1530 aa10.31□□□□□ -0.76
HDLBP-243ENST00000488923 POTEFA5A3E0 1075 aa10.29□□□□□ -0.76
HDLBP-243ENST00000488923 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
HDLBP-243ENST00000488923 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
HDLBP-243ENST00000488923 LAMC3Q9Y6N6 1575 aa10.27□□□□□ -0.76
HDLBP-243ENST00000488923 TIE1P35590 1138 aa10.27□□□□□ -0.77
HDLBP-243ENST00000488923 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
HDLBP-243ENST00000488923 PRXQ9BXM0 1461 aa10.27□□□□□ -0.77
HDLBP-243ENST00000488923 FANCD2Q9BXW9 1451 aa10.27□□□□□ -0.77
HDLBP-243ENST00000488923 ZEB1P37275 1124 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-243ENST00000488923 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
HDLBP-243ENST00000488923 SEC24BO95487 1268 aa10.24□□□□□ -0.77
HDLBP-243ENST00000488923 CLIP1P30622 1438 aa10.24□□□□□ -0.77
HDLBP-243ENST00000488923 CDAN1Q8IWY9 1227 aa10.23□□□□□ -0.77
HDLBP-243ENST00000488923 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
HDLBP-243ENST00000488923 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
HDLBP-243ENST00000488923 PDS5BQ9NTI5 1447 aa10.22□□□□□ -0.77
HDLBP-243ENST00000488923 MAP3K13O43283 966 aa10.2□□□□□ -0.78
HDLBP-243ENST00000488923 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
HDLBP-243ENST00000488923 CUX2O14529 1486 aa10.19□□□□□ -0.78
HDLBP-243ENST00000488923 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
HDLBP-243ENST00000488923 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
HDLBP-243ENST00000488923 IER5LQ5T953 404 aa10.17□□□□□ -0.78
HDLBP-243ENST00000488923 TOPBP1Q92547 1522 aa10.17□□□□□ -0.78
HDLBP-243ENST00000488923 COLQQ9Y215 455 aaPredicted RBP10.16□□□□□ -0.78
HDLBP-243ENST00000488923 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
HDLBP-243ENST00000488923 IGF1RP08069 1367 aa10.15□□□□□ -0.78
HDLBP-243ENST00000488923 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
HDLBP-243ENST00000488923 SGIP1Q9BQI5 828 aa10.14□□□□□ -0.79
HDLBP-243ENST00000488923 CARMIL1Q5VZK9 1371 aa10.13□□□□□ -0.79
HDLBP-243ENST00000488923 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms