RNA–Protein interactions for RNA: ENST00000487913.5

NR1H3-224, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-224ENST00000487913 DIP2BQ9P265 1576 aa24.65■■□□□ 1.54
NR1H3-224ENST00000487913 MAPKBP1O60336 1514 aa24.64■■□□□ 1.53
NR1H3-224ENST00000487913 NPM1P06748 294 aaKnown RBP eCLIP24.63■■□□□ 1.53
NR1H3-224ENST00000487913 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
NR1H3-224ENST00000487913 KDM6BO15054 1643 aa24.62■■□□□ 1.53
NR1H3-224ENST00000487913 ADCY10Q96PN6 1610 aa24.56■■□□□ 1.52
NR1H3-224ENST00000487913 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
NR1H3-224ENST00000487913 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
NR1H3-224ENST00000487913 RUSC2Q8N2Y8 1516 aa24.53■■□□□ 1.52
NR1H3-224ENST00000487913 TSPOAP1O95153 1857 aa24.46■■□□□ 1.51
NR1H3-224ENST00000487913 ADGRL1O94910 1474 aa24.37■■□□□ 1.49
NR1H3-224ENST00000487913 KIAA0586Q9BVV6 1533 aa24.32■■□□□ 1.48
NR1H3-224ENST00000487913 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
NR1H3-224ENST00000487913 PTPRGP23470 1445 aa24.27■■□□□ 1.48
NR1H3-224ENST00000487913 HECW2Q9P2P5 1572 aa24.26■■□□□ 1.47
NR1H3-224ENST00000487913 PPRC1Q5VV67 1664 aaKnown RBP24.26■■□□□ 1.47
NR1H3-224ENST00000487913 TTBK1Q5TCY1 1321 aaPredicted RBP24.25■■□□□ 1.47
NR1H3-224ENST00000487913 ASXL2Q76L83 1435 aa24.23■■□□□ 1.47
NR1H3-224ENST00000487913 ABCC2Q92887 1545 aa24.22■■□□□ 1.47
NR1H3-224ENST00000487913 COL17A1Q9UMD9 1497 aaPredicted RBP24.22■■□□□ 1.47
NR1H3-224ENST00000487913 GLI2P10070 1586 aa24.2■■□□□ 1.47
NR1H3-224ENST00000487913 PLB1Q6P1J6 1458 aa24.19■■□□□ 1.46
NR1H3-224ENST00000487913 IGF1RP08069 1367 aa24.18■■□□□ 1.46
NR1H3-224ENST00000487913 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
NR1H3-224ENST00000487913 CUL7Q14999 1698 aa24.09■■□□□ 1.45
NR1H3-224ENST00000487913 CARMIL2Q6F5E8 1435 aa24.09■■□□□ 1.45
NR1H3-224ENST00000487913 UHRF1BP1LA0JNW5 1464 aa24.08■■□□□ 1.45
NR1H3-224ENST00000487913 EPRSP07814 1512 aaKnown RBP24.07■■□□□ 1.44
NR1H3-224ENST00000487913 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
NR1H3-224ENST00000487913 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
NR1H3-224ENST00000487913 UACAQ9BZF9 1416 aa24.04■■□□□ 1.44
NR1H3-224ENST00000487913 TEX14Q8IWB6 1497 aa24.03■■□□□ 1.44
NR1H3-224ENST00000487913 CARMIL1Q5VZK9 1371 aa23.99■■□□□ 1.43
NR1H3-224ENST00000487913 KDM5BQ9UGL1 1544 aa23.99■■□□□ 1.43
NR1H3-224ENST00000487913 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
NR1H3-224ENST00000487913 FBXO41Q8TF61 875 aa23.97■■□□□ 1.43
NR1H3-224ENST00000487913 DISP1Q96F81 1524 aa23.96■■□□□ 1.43
NR1H3-224ENST00000487913 ZCCHC11Q5TAX3 1644 aaKnown RBP23.92■■□□□ 1.42
NR1H3-224ENST00000487913 WDR7Q9Y4E6 1490 aa23.86■■□□□ 1.41
NR1H3-224ENST00000487913 UGGT2Q9NYU1 1516 aa23.8■■□□□ 1.4
NR1H3-224ENST00000487913 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
NR1H3-224ENST00000487913 MAGI3Q5TCQ9 1506 aa23.79■■□□□ 1.4
NR1H3-224ENST00000487913 KIF21BO75037 1637 aa23.78■■□□□ 1.4
NR1H3-224ENST00000487913 KIAA0556O60303 1618 aa23.77■■□□□ 1.4
NR1H3-224ENST00000487913 KCNH8Q96L42 1107 aa23.74■■□□□ 1.39
NR1H3-224ENST00000487913 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
NR1H3-224ENST00000487913 PTPRMP28827 1452 aa23.68■■□□□ 1.38
NR1H3-224ENST00000487913 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
NR1H3-224ENST00000487913 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
NR1H3-224ENST00000487913 ADAMTSL3P82987 1691 aa23.62■■□□□ 1.37
NR1H3-224ENST00000487913 ABCA8O94911 1581 aa23.61■■□□□ 1.37
NR1H3-224ENST00000487913 PCF11O94913 1555 aaKnown RBP23.57■■□□□ 1.36
NR1H3-224ENST00000487913 LMTK3Q96Q04 1460 aa23.56■■□□□ 1.36
NR1H3-224ENST00000487913 RAPGEF3O95398 923 aa23.52■■□□□ 1.36
NR1H3-224ENST00000487913 GOLGA3Q08378 1498 aa23.51■■□□□ 1.35
NR1H3-224ENST00000487913 ARID3CA6NKF2 412 aa23.51■■□□□ 1.35
NR1H3-224ENST00000487913 MADDQ8WXG6 1647 aa23.5■■□□□ 1.35
NR1H3-224ENST00000487913 BCORL1Q5H9F3 1711 aa23.48■■□□□ 1.35
NR1H3-224ENST00000487913 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
NR1H3-224ENST00000487913 PHLDB1Q86UU1 1377 aa23.46■■□□□ 1.35
NR1H3-224ENST00000487913 CTTNBP2Q8WZ74 1663 aa23.45■■□□□ 1.34
NR1H3-224ENST00000487913 HSPA2P54652 639 aa23.45■■□□□ 1.34
NR1H3-224ENST00000487913 ATP10BO94823 1461 aa23.44■■□□□ 1.34
NR1H3-224ENST00000487913 ABCA9Q8IUA7 1624 aa23.43■■□□□ 1.34
NR1H3-224ENST00000487913 FRMPD1Q5SYB0 1578 aa23.42■■□□□ 1.34
NR1H3-224ENST00000487913 NEO1Q92859 1461 aa23.4■■□□□ 1.34
NR1H3-224ENST00000487913 CERKQ8TCT0 537 aa23.39■■□□□ 1.33
NR1H3-224ENST00000487913 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
NR1H3-224ENST00000487913 ILDR2Q71H61 639 aa23.37■■□□□ 1.33
NR1H3-224ENST00000487913 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
NR1H3-224ENST00000487913 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
NR1H3-224ENST00000487913 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.32
NR1H3-224ENST00000487913 DISP3Q9P2K9 1392 aa23.31■■□□□ 1.32
NR1H3-224ENST00000487913 SOCS7O14512 581 aa23.3■■□□□ 1.32
NR1H3-224ENST00000487913 PRXQ9BXM0 1461 aa23.26■■□□□ 1.31
NR1H3-224ENST00000487913 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
NR1H3-224ENST00000487913 DENND4BO75064 1496 aaPredicted RBP23.24■■□□□ 1.31
NR1H3-224ENST00000487913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.23■■□□□ 1.31
NR1H3-224ENST00000487913 HNRNPUL2Q1KMD3 747 aaKnown RBP23.23■■□□□ 1.31
NR1H3-224ENST00000487913 POGZQ7Z3K3 1410 aa23.21■■□□□ 1.31
NR1H3-224ENST00000487913 FANCAO15360 1455 aa23.21■■□□□ 1.31
NR1H3-224ENST00000487913 RICTORQ6R327 1708 aa23.21■■□□□ 1.31
NR1H3-224ENST00000487913 SIGLEC1Q9BZZ2 1709 aa23.2■■□□□ 1.3
NR1H3-224ENST00000487913 FHOD3Q2V2M9 1422 aa23.2■■□□□ 1.3
NR1H3-224ENST00000487913 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
NR1H3-224ENST00000487913 AKNAQ7Z591 1439 aa23.19■■□□□ 1.3
NR1H3-224ENST00000487913 YEATS2Q9ULM3 1422 aa23.18■■□□□ 1.3
NR1H3-224ENST00000487913 MLECQ14165 292 aa23.17■■□□□ 1.3
NR1H3-224ENST00000487913 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
NR1H3-224ENST00000487913 ZMYM4Q5VZL5 1548 aa23.14■■□□□ 1.3
NR1H3-224ENST00000487913 ZFYVE16Q7Z3T8 1539 aa23.14■■□□□ 1.3
NR1H3-224ENST00000487913 SAMD9Q5K651 1589 aa23.14■■□□□ 1.29
NR1H3-224ENST00000487913 TTC37Q6PGP7 1564 aa23.12■■□□□ 1.29
NR1H3-224ENST00000487913 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
NR1H3-224ENST00000487913 FER1L4A9Z1Z3 1794 aa23.09■■□□□ 1.29
NR1H3-224ENST00000487913 CFAP74Q9C0B2 1584 aa23.08■■□□□ 1.29
NR1H3-224ENST00000487913 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
NR1H3-224ENST00000487913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.07■■□□□ 1.28
NR1H3-224ENST00000487913 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
NR1H3-224ENST00000487913 PLEKHD1A6NEE1 506 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms