RNA–Protein interactions for RNA: ENST00000487720.1

SKAP2-205, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 5

Gene SKAP2, Length 536 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-205ENST00000487720 NUP160Q12769 1436 aa18.31■□□□□ 0.52
SKAP2-205ENST00000487720 ADRA2BP18089 450 aa18.27■□□□□ 0.52
SKAP2-205ENST00000487720 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
SKAP2-205ENST00000487720 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
SKAP2-205ENST00000487720 IGF1RP08069 1367 aa18.2■□□□□ 0.5
SKAP2-205ENST00000487720 ERCC6L2Q5T890 1561 aa18.19■□□□□ 0.5
SKAP2-205ENST00000487720 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
SKAP2-205ENST00000487720 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
SKAP2-205ENST00000487720 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
SKAP2-205ENST00000487720 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
SKAP2-205ENST00000487720 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
SKAP2-205ENST00000487720 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
SKAP2-205ENST00000487720 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
SKAP2-205ENST00000487720 CUL7Q14999 1698 aa18.06■□□□□ 0.48
SKAP2-205ENST00000487720 KIAA0586Q9BVV6 1533 aa18.05■□□□□ 0.48
SKAP2-205ENST00000487720 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
SKAP2-205ENST00000487720 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
SKAP2-205ENST00000487720 PTPRGP23470 1445 aa17.86■□□□□ 0.45
SKAP2-205ENST00000487720 IQGAP2Q13576 1575 aa17.86■□□□□ 0.45
SKAP2-205ENST00000487720 CARMIL2Q6F5E8 1435 aa17.85■□□□□ 0.45
SKAP2-205ENST00000487720 ADCY10Q96PN6 1610 aa17.85■□□□□ 0.45
SKAP2-205ENST00000487720 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.45
SKAP2-205ENST00000487720 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
SKAP2-205ENST00000487720 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
SKAP2-205ENST00000487720 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
SKAP2-205ENST00000487720 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
SKAP2-205ENST00000487720 UGGT2Q9NYU1 1516 aa17.78■□□□□ 0.44
SKAP2-205ENST00000487720 FAM69CQ0P6D2 419 aa17.78■□□□□ 0.44
SKAP2-205ENST00000487720 TTBK1Q5TCY1 1321 aaPredicted RBP17.77■□□□□ 0.44
SKAP2-205ENST00000487720 PRXQ9BXM0 1461 aa17.77■□□□□ 0.44
SKAP2-205ENST00000487720 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
SKAP2-205ENST00000487720 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
SKAP2-205ENST00000487720 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
SKAP2-205ENST00000487720 DIP2BQ9P265 1576 aa17.71■□□□□ 0.43
SKAP2-205ENST00000487720 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
SKAP2-205ENST00000487720 KIAA0556O60303 1618 aa17.69■□□□□ 0.42
SKAP2-205ENST00000487720 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
SKAP2-205ENST00000487720 ASXL2Q76L83 1435 aa17.65■□□□□ 0.42
SKAP2-205ENST00000487720 PLB1Q6P1J6 1458 aa17.64■□□□□ 0.41
SKAP2-205ENST00000487720 KDM5BQ9UGL1 1544 aa17.64■□□□□ 0.41
SKAP2-205ENST00000487720 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
SKAP2-205ENST00000487720 EEA1Q15075 1411 aa17.61■□□□□ 0.41
SKAP2-205ENST00000487720 GLI2P10070 1586 aa17.58■□□□□ 0.41
SKAP2-205ENST00000487720 ZCCHC11Q5TAX3 1644 aaKnown RBP17.55■□□□□ 0.4
SKAP2-205ENST00000487720 TSPOAP1O95153 1857 aa17.55■□□□□ 0.4
SKAP2-205ENST00000487720 ABCA8O94911 1581 aa17.54■□□□□ 0.4
SKAP2-205ENST00000487720 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
SKAP2-205ENST00000487720 FAM9AQ8IZU1 332 aaPredicted RBP17.53■□□□□ 0.4
SKAP2-205ENST00000487720 P3H3Q8IVL6 736 aa17.52■□□□□ 0.4
SKAP2-205ENST00000487720 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
SKAP2-205ENST00000487720 KDM6BO15054 1643 aa17.49■□□□□ 0.39
SKAP2-205ENST00000487720 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
SKAP2-205ENST00000487720 SAMD9Q5K651 1589 aa17.47■□□□□ 0.39
SKAP2-205ENST00000487720 MAP3K4Q9Y6R4 1608 aa17.46■□□□□ 0.39
SKAP2-205ENST00000487720 ATP10BO94823 1461 aa17.44■□□□□ 0.38
SKAP2-205ENST00000487720 KCNH8Q96L42 1107 aa17.43■□□□□ 0.38
SKAP2-205ENST00000487720 KIF21BO75037 1637 aa17.43■□□□□ 0.38
SKAP2-205ENST00000487720 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
SKAP2-205ENST00000487720 TEX14Q8IWB6 1497 aa17.41■□□□□ 0.38
SKAP2-205ENST00000487720 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
SKAP2-205ENST00000487720 ARID3CA6NKF2 412 aa17.39■□□□□ 0.37
SKAP2-205ENST00000487720 CD109Q6YHK3 1445 aa17.38■□□□□ 0.37
SKAP2-205ENST00000487720 FHOD3Q2V2M9 1422 aa17.37■□□□□ 0.37
SKAP2-205ENST00000487720 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
SKAP2-205ENST00000487720 KDM4FA0A1W2PPD8 638 aa17.35■□□□□ 0.37
SKAP2-205ENST00000487720 RAPGEF6Q8TEU7 1601 aa17.35■□□□□ 0.37
SKAP2-205ENST00000487720 CFAP43Q8NDM7 1665 aa17.35■□□□□ 0.37
SKAP2-205ENST00000487720 NUP153P49790 1475 aaKnown RBP17.34■□□□□ 0.37
SKAP2-205ENST00000487720 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.36
SKAP2-205ENST00000487720 EFCAB5A4FU69 1503 aa17.32■□□□□ 0.36
SKAP2-205ENST00000487720 EHMT2Q96KQ7 1210 aa17.3■□□□□ 0.36
SKAP2-205ENST00000487720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
SKAP2-205ENST00000487720 HNRNPUL2Q1KMD3 747 aaKnown RBP17.29■□□□□ 0.36
SKAP2-205ENST00000487720 ABCA9Q8IUA7 1624 aa17.26■□□□□ 0.35
SKAP2-205ENST00000487720 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
SKAP2-205ENST00000487720 ARAP3Q8WWN8 1544 aa17.24■□□□□ 0.35
SKAP2-205ENST00000487720 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
SKAP2-205ENST00000487720 ARHGAP35Q9NRY4 1499 aa17.23■□□□□ 0.35
SKAP2-205ENST00000487720 FMN1Q68DA7 1419 aa17.19■□□□□ 0.34
SKAP2-205ENST00000487720 NEO1Q92859 1461 aa17.18■□□□□ 0.34
SKAP2-205ENST00000487720 ADGRL1O94910 1474 aa17.18■□□□□ 0.34
SKAP2-205ENST00000487720 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
SKAP2-205ENST00000487720 RAPGEF3O95398 923 aa17.15■□□□□ 0.34
SKAP2-205ENST00000487720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.13■□□□□ 0.33
SKAP2-205ENST00000487720 ATP1B4Q9UN42 357 aaPredicted RBP17.13■□□□□ 0.33
SKAP2-205ENST00000487720 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
SKAP2-205ENST00000487720 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
SKAP2-205ENST00000487720 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
SKAP2-205ENST00000487720 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
SKAP2-205ENST00000487720 FANCAO15360 1455 aa17.08■□□□□ 0.32
SKAP2-205ENST00000487720 AKNAQ7Z591 1439 aa17.08■□□□□ 0.32
SKAP2-205ENST00000487720 FRMPD1Q5SYB0 1578 aa17.06■□□□□ 0.32
SKAP2-205ENST00000487720 PLCH2O75038 1416 aa17.06■□□□□ 0.32
SKAP2-205ENST00000487720 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
SKAP2-205ENST00000487720 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
SKAP2-205ENST00000487720 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
SKAP2-205ENST00000487720 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
SKAP2-205ENST00000487720 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
SKAP2-205ENST00000487720 CLIP1P30622 1438 aa17.01■□□□□ 0.31
SKAP2-205ENST00000487720 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms