RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
SATB1-215ENST00000487699 JPH4Q96JJ6 628 aa16.45■□□□□ 0.22
SATB1-215ENST00000487699 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
SATB1-215ENST00000487699 PRXQ9BXM0 1461 aa16.44■□□□□ 0.22
SATB1-215ENST00000487699 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
SATB1-215ENST00000487699 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
SATB1-215ENST00000487699 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
SATB1-215ENST00000487699 EEA1Q15075 1411 aa16.34■□□□□ 0.21
SATB1-215ENST00000487699 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
SATB1-215ENST00000487699 IQGAP2Q13576 1575 aa16.3■□□□□ 0.2
SATB1-215ENST00000487699 DISP1Q96F81 1524 aa16.28■□□□□ 0.2
SATB1-215ENST00000487699 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
SATB1-215ENST00000487699 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
SATB1-215ENST00000487699 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
SATB1-215ENST00000487699 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
SATB1-215ENST00000487699 KIF21BO75037 1637 aa16.19■□□□□ 0.18
SATB1-215ENST00000487699 PTPRGP23470 1445 aa16.19■□□□□ 0.18
SATB1-215ENST00000487699 KIAA0556O60303 1618 aa16.16■□□□□ 0.18
SATB1-215ENST00000487699 ADCY10Q96PN6 1610 aa16.16■□□□□ 0.18
SATB1-215ENST00000487699 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
SATB1-215ENST00000487699 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
SATB1-215ENST00000487699 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
SATB1-215ENST00000487699 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
SATB1-215ENST00000487699 SAMD9Q5K651 1589 aa16.08■□□□□ 0.16
SATB1-215ENST00000487699 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
SATB1-215ENST00000487699 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
SATB1-215ENST00000487699 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
SATB1-215ENST00000487699 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
SATB1-215ENST00000487699 ABCC2Q92887 1545 aa16.04■□□□□ 0.16
SATB1-215ENST00000487699 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
SATB1-215ENST00000487699 ABCA8O94911 1581 aa16.03■□□□□ 0.16
SATB1-215ENST00000487699 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.16
SATB1-215ENST00000487699 KDM5BQ9UGL1 1544 aa16.02■□□□□ 0.15
SATB1-215ENST00000487699 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
SATB1-215ENST00000487699 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
SATB1-215ENST00000487699 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
SATB1-215ENST00000487699 ABCC10Q5T3U5 1492 aa15.98■□□□□ 0.15
SATB1-215ENST00000487699 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.14
SATB1-215ENST00000487699 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
SATB1-215ENST00000487699 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
SATB1-215ENST00000487699 KIF13AQ9H1H9 1805 aa15.94■□□□□ 0.14
SATB1-215ENST00000487699 DIP2BQ9P265 1576 aa15.94■□□□□ 0.14
SATB1-215ENST00000487699 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
SATB1-215ENST00000487699 FAM69CQ0P6D2 419 aa15.93■□□□□ 0.14
SATB1-215ENST00000487699 ATP10BO94823 1461 aa15.92■□□□□ 0.14
SATB1-215ENST00000487699 NUP153P49790 1475 aaKnown RBP15.9■□□□□ 0.14
SATB1-215ENST00000487699 RAPGEF6Q8TEU7 1601 aa15.88■□□□□ 0.13
SATB1-215ENST00000487699 EPRSP07814 1512 aaKnown RBP15.88■□□□□ 0.13
SATB1-215ENST00000487699 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
SATB1-215ENST00000487699 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
SATB1-215ENST00000487699 GLI2P10070 1586 aa15.86■□□□□ 0.13
SATB1-215ENST00000487699 WDR7Q9Y4E6 1490 aa15.85■□□□□ 0.13
SATB1-215ENST00000487699 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
SATB1-215ENST00000487699 CLIP1P30622 1438 aa15.8■□□□□ 0.12
SATB1-215ENST00000487699 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
SATB1-215ENST00000487699 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
SATB1-215ENST00000487699 MAP3K4Q9Y6R4 1608 aa15.77■□□□□ 0.12
SATB1-215ENST00000487699 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
SATB1-215ENST00000487699 CEP162Q5TB80 1403 aa15.75■□□□□ 0.11
SATB1-215ENST00000487699 CASKIN1Q8WXD9 1431 aa15.73■□□□□ 0.11
SATB1-215ENST00000487699 TSPOAP1O95153 1857 aa15.72■□□□□ 0.11
SATB1-215ENST00000487699 COL17A1Q9UMD9 1497 aaPredicted RBP15.71■□□□□ 0.11
SATB1-215ENST00000487699 CD109Q6YHK3 1445 aa15.71■□□□□ 0.11
SATB1-215ENST00000487699 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
SATB1-215ENST00000487699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
SATB1-215ENST00000487699 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
SATB1-215ENST00000487699 HECW1Q76N89 1606 aa15.71■□□□□ 0.11
SATB1-215ENST00000487699 LRRIQ1Q96JM4 1722 aa15.71■□□□□ 0.1
SATB1-215ENST00000487699 MAGI3Q5TCQ9 1506 aa15.7■□□□□ 0.1
SATB1-215ENST00000487699 PCF11O94913 1555 aaKnown RBP15.7■□□□□ 0.1
SATB1-215ENST00000487699 ABCA9Q8IUA7 1624 aa15.69■□□□□ 0.1
SATB1-215ENST00000487699 CFAP43Q8NDM7 1665 aa15.68■□□□□ 0.1
SATB1-215ENST00000487699 ATP1B4Q9UN42 357 aaPredicted RBP15.68■□□□□ 0.1
SATB1-215ENST00000487699 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
SATB1-215ENST00000487699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.65■□□□□ 0.1
SATB1-215ENST00000487699 TEX14Q8IWB6 1497 aa15.63■□□□□ 0.09
SATB1-215ENST00000487699 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
SATB1-215ENST00000487699 KDM6BO15054 1643 aa15.62■□□□□ 0.09
SATB1-215ENST00000487699 TTC37Q6PGP7 1564 aa15.61■□□□□ 0.09
SATB1-215ENST00000487699 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
SATB1-215ENST00000487699 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
SATB1-215ENST00000487699 KIF14Q15058 1648 aa15.58■□□□□ 0.09
SATB1-215ENST00000487699 PLCH2O75038 1416 aa15.57■□□□□ 0.08
SATB1-215ENST00000487699 ARAP3Q8WWN8 1544 aa15.57■□□□□ 0.08
SATB1-215ENST00000487699 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
SATB1-215ENST00000487699 NEO1Q92859 1461 aa15.56■□□□□ 0.08
SATB1-215ENST00000487699 PHLDB1Q86UU1 1377 aa15.55■□□□□ 0.08
SATB1-215ENST00000487699 FANCAO15360 1455 aa15.52■□□□□ 0.07
SATB1-215ENST00000487699 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
SATB1-215ENST00000487699 RAPGEF3O95398 923 aa15.5■□□□□ 0.07
SATB1-215ENST00000487699 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
SATB1-215ENST00000487699 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.07
SATB1-215ENST00000487699 GPATCH8Q9UKJ3 1502 aaKnown RBP15.46■□□□□ 0.07
SATB1-215ENST00000487699 TIAM1Q13009 1591 aa15.45■□□□□ 0.06
SATB1-215ENST00000487699 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
SATB1-215ENST00000487699 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
SATB1-215ENST00000487699 CDC42BPBQ9Y5S2 1711 aa15.45■□□□□ 0.06
SATB1-215ENST00000487699 MYO5CQ9NQX4 1742 aa15.44■□□□□ 0.06
SATB1-215ENST00000487699 DENND4BO75064 1496 aaPredicted RBP15.44■□□□□ 0.06
SATB1-215ENST00000487699 SCAPERQ9BY12 1400 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms