RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 NPM1P06748 294 aaKnown RBP eCLIP23.11■■□□□ 1.29
SGIP1-212ENST00000487507 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
SGIP1-212ENST00000487507 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
SGIP1-212ENST00000487507 ADCY10Q96PN6 1610 aa23.08■■□□□ 1.28
SGIP1-212ENST00000487507 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
SGIP1-212ENST00000487507 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
SGIP1-212ENST00000487507 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
SGIP1-212ENST00000487507 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
SGIP1-212ENST00000487507 WRNQ14191 1432 aaPredicted RBP eCLIP22.9■■□□□ 1.26
SGIP1-212ENST00000487507 PPRC1Q5VV67 1664 aaKnown RBP22.89■■□□□ 1.25
SGIP1-212ENST00000487507 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
SGIP1-212ENST00000487507 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
SGIP1-212ENST00000487507 FBXO41Q8TF61 875 aa22.8■■□□□ 1.24
SGIP1-212ENST00000487507 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
SGIP1-212ENST00000487507 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
SGIP1-212ENST00000487507 CUL7Q14999 1698 aa22.74■■□□□ 1.23
SGIP1-212ENST00000487507 COL17A1Q9UMD9 1497 aaPredicted RBP22.71■■□□□ 1.23
SGIP1-212ENST00000487507 GLI2P10070 1586 aa22.67■■□□□ 1.22
SGIP1-212ENST00000487507 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
SGIP1-212ENST00000487507 MAP3K4Q9Y6R4 1608 aa22.62■■□□□ 1.21
SGIP1-212ENST00000487507 ABCC2Q92887 1545 aa22.62■■□□□ 1.21
SGIP1-212ENST00000487507 PTPRGP23470 1445 aa22.61■■□□□ 1.21
SGIP1-212ENST00000487507 PLB1Q6P1J6 1458 aa22.6■■□□□ 1.21
SGIP1-212ENST00000487507 KIAA0586Q9BVV6 1533 aa22.59■■□□□ 1.21
SGIP1-212ENST00000487507 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.2
SGIP1-212ENST00000487507 KIF21BO75037 1637 aa22.53■■□□□ 1.2
SGIP1-212ENST00000487507 TEX14Q8IWB6 1497 aa22.53■■□□□ 1.2
SGIP1-212ENST00000487507 EPRSP07814 1512 aaKnown RBP22.51■■□□□ 1.19
SGIP1-212ENST00000487507 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
SGIP1-212ENST00000487507 TNIKQ9UKE5 1360 aa22.46■■□□□ 1.19
SGIP1-212ENST00000487507 CARMIL2Q6F5E8 1435 aa22.42■■□□□ 1.18
SGIP1-212ENST00000487507 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
SGIP1-212ENST00000487507 UACAQ9BZF9 1416 aa22.39■■□□□ 1.17
SGIP1-212ENST00000487507 ILDR2Q71H61 639 aa22.35■■□□□ 1.17
SGIP1-212ENST00000487507 IQGAP2Q13576 1575 aa22.34■■□□□ 1.17
SGIP1-212ENST00000487507 KDM5BQ9UGL1 1544 aa22.34■■□□□ 1.17
SGIP1-212ENST00000487507 IGF1RP08069 1367 aa22.33■■□□□ 1.17
SGIP1-212ENST00000487507 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
SGIP1-212ENST00000487507 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
SGIP1-212ENST00000487507 PTPRMP28827 1452 aa22.3■■□□□ 1.16
SGIP1-212ENST00000487507 DISP3Q9P2K9 1392 aa22.3■■□□□ 1.16
SGIP1-212ENST00000487507 SOCS7O14512 581 aa22.29■■□□□ 1.16
SGIP1-212ENST00000487507 ADAMTSL3P82987 1691 aa22.29■■□□□ 1.16
SGIP1-212ENST00000487507 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
SGIP1-212ENST00000487507 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
SGIP1-212ENST00000487507 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
SGIP1-212ENST00000487507 CD109Q6YHK3 1445 aa22.24■■□□□ 1.15
SGIP1-212ENST00000487507 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
SGIP1-212ENST00000487507 KCNH8Q96L42 1107 aa22.23■■□□□ 1.15
SGIP1-212ENST00000487507 MAGI3Q5TCQ9 1506 aa22.21■■□□□ 1.15
SGIP1-212ENST00000487507 MADDQ8WXG6 1647 aa22.2■■□□□ 1.15
SGIP1-212ENST00000487507 CARMIL1Q5VZK9 1371 aa22.19■■□□□ 1.14
SGIP1-212ENST00000487507 BCORL1Q5H9F3 1711 aa22.17■■□□□ 1.14
SGIP1-212ENST00000487507 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
SGIP1-212ENST00000487507 KIAA0556O60303 1618 aa22.17■■□□□ 1.14
SGIP1-212ENST00000487507 HSPA2P54652 639 aa22.14■■□□□ 1.13
SGIP1-212ENST00000487507 CERKQ8TCT0 537 aa22.14■■□□□ 1.13
SGIP1-212ENST00000487507 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
SGIP1-212ENST00000487507 ARID4BQ4LE39 1312 aaPredicted RBP22.09■■□□□ 1.13
SGIP1-212ENST00000487507 SPATA31D1Q6ZQQ2 1576 aa22.08■■□□□ 1.13
SGIP1-212ENST00000487507 UGGT2Q9NYU1 1516 aa22.08■■□□□ 1.13
SGIP1-212ENST00000487507 ARAP3Q8WWN8 1544 aa22.07■■□□□ 1.12
SGIP1-212ENST00000487507 RAPGEF3O95398 923 aa22.01■■□□□ 1.11
SGIP1-212ENST00000487507 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
SGIP1-212ENST00000487507 ABCA8O94911 1581 aa21.98■■□□□ 1.11
SGIP1-212ENST00000487507 CTTNBP2Q8WZ74 1663 aa21.96■■□□□ 1.11
SGIP1-212ENST00000487507 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.11
SGIP1-212ENST00000487507 ABCA9Q8IUA7 1624 aa21.91■■□□□ 1.1
SGIP1-212ENST00000487507 RAPGEF2Q9Y4G8 1499 aa21.89■■□□□ 1.09
SGIP1-212ENST00000487507 FER1L4A9Z1Z3 1794 aa21.88■■□□□ 1.09
SGIP1-212ENST00000487507 ARHGEF40Q8TER5 1519 aa21.87■■□□□ 1.09
SGIP1-212ENST00000487507 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
SGIP1-212ENST00000487507 RICTORQ6R327 1708 aa21.83■■□□□ 1.08
SGIP1-212ENST00000487507 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
SGIP1-212ENST00000487507 PREX1Q8TCU6 1659 aa21.82■■□□□ 1.08
SGIP1-212ENST00000487507 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
SGIP1-212ENST00000487507 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
SGIP1-212ENST00000487507 NEO1Q92859 1461 aa21.81■■□□□ 1.08
SGIP1-212ENST00000487507 MLECQ14165 292 aa21.8■■□□□ 1.08
SGIP1-212ENST00000487507 ATP10BO94823 1461 aa21.77■■□□□ 1.08
SGIP1-212ENST00000487507 FANCAO15360 1455 aa21.76■■□□□ 1.07
SGIP1-212ENST00000487507 POGZQ7Z3K3 1410 aa21.74■■□□□ 1.07
SGIP1-212ENST00000487507 TTC37Q6PGP7 1564 aa21.74■■□□□ 1.07
SGIP1-212ENST00000487507 P3H3Q8IVL6 736 aa21.71■■□□□ 1.07
SGIP1-212ENST00000487507 DENND4BO75064 1496 aaPredicted RBP21.7■■□□□ 1.06
SGIP1-212ENST00000487507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
SGIP1-212ENST00000487507 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
SGIP1-212ENST00000487507 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
SGIP1-212ENST00000487507 AKNAQ7Z591 1439 aa21.68■■□□□ 1.06
SGIP1-212ENST00000487507 ZFYVE16Q7Z3T8 1539 aa21.68■■□□□ 1.06
SGIP1-212ENST00000487507 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
SGIP1-212ENST00000487507 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
SGIP1-212ENST00000487507 CEBPAP49715 358 aaPredicted RBP21.64■■□□□ 1.05
SGIP1-212ENST00000487507 CFAP74Q9C0B2 1584 aa21.63■■□□□ 1.05
SGIP1-212ENST00000487507 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
SGIP1-212ENST00000487507 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
SGIP1-212ENST00000487507 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
SGIP1-212ENST00000487507 FHOD3Q2V2M9 1422 aa21.6■■□□□ 1.05
SGIP1-212ENST00000487507 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
SGIP1-212ENST00000487507 ARHGEF12Q9NZN5 1544 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms