RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
NME1-208ENST00000487481 FAM69CQ0P6D2 419 aa27.61■■■□□ 2.01
NME1-208ENST00000487481 RUSC2Q8N2Y8 1516 aa27.61■■■□□ 2.01
NME1-208ENST00000487481 DIP2BQ9P265 1576 aa27.6■■■□□ 2.01
NME1-208ENST00000487481 NPM1P06748 294 aaKnown RBP eCLIP27.56■■■□□ 2
NME1-208ENST00000487481 ADCY10Q96PN6 1610 aa27.53■■■□□ 2
NME1-208ENST00000487481 KDM6BO15054 1643 aa27.52■■■□□ 2
NME1-208ENST00000487481 KDM4FA0A1W2PPD8 638 aa27.44■■□□□ 1.98
NME1-208ENST00000487481 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
NME1-208ENST00000487481 TSPOAP1O95153 1857 aa27.4■■□□□ 1.98
NME1-208ENST00000487481 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
NME1-208ENST00000487481 CUL7Q14999 1698 aa27.27■■□□□ 1.96
NME1-208ENST00000487481 ILDR1Q86SU0 546 aaPredicted RBP27.23■■□□□ 1.95
NME1-208ENST00000487481 PTPRGP23470 1445 aa27.21■■□□□ 1.95
NME1-208ENST00000487481 IGF1RP08069 1367 aa27.2■■□□□ 1.94
NME1-208ENST00000487481 ABCC2Q92887 1545 aa27.19■■□□□ 1.94
NME1-208ENST00000487481 PPRC1Q5VV67 1664 aaKnown RBP27.17■■□□□ 1.94
NME1-208ENST00000487481 GLI2P10070 1586 aa27.17■■□□□ 1.94
NME1-208ENST00000487481 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
NME1-208ENST00000487481 PLB1Q6P1J6 1458 aa27.14■■□□□ 1.94
NME1-208ENST00000487481 ASXL2Q76L83 1435 aa27.14■■□□□ 1.93
NME1-208ENST00000487481 ADGRL1O94910 1474 aa27.13■■□□□ 1.93
NME1-208ENST00000487481 TNIKQ9UKE5 1360 aa27.12■■□□□ 1.93
NME1-208ENST00000487481 CARMIL2Q6F5E8 1435 aa27.11■■□□□ 1.93
NME1-208ENST00000487481 UHRF1BP1LA0JNW5 1464 aa27.07■■□□□ 1.92
NME1-208ENST00000487481 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
NME1-208ENST00000487481 IQGAP2Q13576 1575 aa27.03■■□□□ 1.92
NME1-208ENST00000487481 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.91
NME1-208ENST00000487481 MAP3K4Q9Y6R4 1608 aa27■■□□□ 1.91
NME1-208ENST00000487481 UACAQ9BZF9 1416 aa26.99■■□□□ 1.91
NME1-208ENST00000487481 COL17A1Q9UMD9 1497 aaPredicted RBP26.99■■□□□ 1.91
NME1-208ENST00000487481 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
NME1-208ENST00000487481 EPRSP07814 1512 aaKnown RBP26.97■■□□□ 1.91
NME1-208ENST00000487481 TEX14Q8IWB6 1497 aa26.97■■□□□ 1.91
NME1-208ENST00000487481 KDM5BQ9UGL1 1544 aa26.95■■□□□ 1.9
NME1-208ENST00000487481 DISP1Q96F81 1524 aa26.93■■□□□ 1.9
NME1-208ENST00000487481 ZCCHC11Q5TAX3 1644 aaKnown RBP26.9■■□□□ 1.9
NME1-208ENST00000487481 UGGT2Q9NYU1 1516 aa26.84■■□□□ 1.89
NME1-208ENST00000487481 KIAA0556O60303 1618 aa26.79■■□□□ 1.88
NME1-208ENST00000487481 WDR7Q9Y4E6 1490 aa26.79■■□□□ 1.88
NME1-208ENST00000487481 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
NME1-208ENST00000487481 MAGI3Q5TCQ9 1506 aa26.71■■□□□ 1.87
NME1-208ENST00000487481 CFAP43Q8NDM7 1665 aa26.71■■□□□ 1.87
NME1-208ENST00000487481 CD109Q6YHK3 1445 aa26.66■■□□□ 1.86
NME1-208ENST00000487481 KIF21BO75037 1637 aa26.61■■□□□ 1.85
NME1-208ENST00000487481 CTTNBP2Q8WZ74 1663 aa26.59■■□□□ 1.85
NME1-208ENST00000487481 ABCA8O94911 1581 aa26.58■■□□□ 1.85
NME1-208ENST00000487481 GOLGA3Q08378 1498 aa26.56■■□□□ 1.84
NME1-208ENST00000487481 FBXO41Q8TF61 875 aa26.55■■□□□ 1.84
NME1-208ENST00000487481 KCNH8Q96L42 1107 aa26.53■■□□□ 1.84
NME1-208ENST00000487481 ARAP3Q8WWN8 1544 aa26.51■■□□□ 1.83
NME1-208ENST00000487481 ADAMTSL3P82987 1691 aa26.44■■□□□ 1.82
NME1-208ENST00000487481 PTPRMP28827 1452 aa26.42■■□□□ 1.82
NME1-208ENST00000487481 PHLDB1Q86UU1 1377 aa26.4■■□□□ 1.82
NME1-208ENST00000487481 ABCA9Q8IUA7 1624 aa26.37■■□□□ 1.81
NME1-208ENST00000487481 PCF11O94913 1555 aaKnown RBP26.33■■□□□ 1.8
NME1-208ENST00000487481 ATP10BO94823 1461 aa26.32■■□□□ 1.8
NME1-208ENST00000487481 BCORL1Q5H9F3 1711 aa26.32■■□□□ 1.8
NME1-208ENST00000487481 NEO1Q92859 1461 aa26.3■■□□□ 1.8
NME1-208ENST00000487481 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
NME1-208ENST00000487481 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
NME1-208ENST00000487481 MADDQ8WXG6 1647 aa26.28■■□□□ 1.8
NME1-208ENST00000487481 LMTK3Q96Q04 1460 aa26.27■■□□□ 1.8
NME1-208ENST00000487481 FRMPD1Q5SYB0 1578 aa26.26■■□□□ 1.79
NME1-208ENST00000487481 ARID3CA6NKF2 412 aa26.26■■□□□ 1.79
NME1-208ENST00000487481 RAPGEF3O95398 923 aa26.26■■□□□ 1.79
NME1-208ENST00000487481 ARHGEF40Q8TER5 1519 aa26.19■■□□□ 1.78
NME1-208ENST00000487481 ARID4BQ4LE39 1312 aaPredicted RBP26.19■■□□□ 1.78
NME1-208ENST00000487481 RAPGEF6Q8TEU7 1601 aa26.18■■□□□ 1.78
NME1-208ENST00000487481 RIMS1Q86UR5 1692 aaKnown RBP26.17■■□□□ 1.78
NME1-208ENST00000487481 SAMD9Q5K651 1589 aa26.16■■□□□ 1.78
NME1-208ENST00000487481 P3H3Q8IVL6 736 aa26.15■■□□□ 1.78
NME1-208ENST00000487481 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
NME1-208ENST00000487481 DENND4BO75064 1496 aaPredicted RBP26.09■■□□□ 1.77
NME1-208ENST00000487481 CFAP74Q9C0B2 1584 aa26.07■■□□□ 1.76
NME1-208ENST00000487481 NUP153P49790 1475 aaKnown RBP26.06■■□□□ 1.76
NME1-208ENST00000487481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.06■■□□□ 1.76
NME1-208ENST00000487481 HNRNPUL2Q1KMD3 747 aaKnown RBP26.06■■□□□ 1.76
NME1-208ENST00000487481 FHOD3Q2V2M9 1422 aa26.05■■□□□ 1.76
NME1-208ENST00000487481 FANCAO15360 1455 aa26.05■■□□□ 1.76
NME1-208ENST00000487481 POGZQ7Z3K3 1410 aa26.05■■□□□ 1.76
NME1-208ENST00000487481 ZMYM4Q5VZL5 1548 aa26.04■■□□□ 1.76
NME1-208ENST00000487481 AKNAQ7Z591 1439 aa26.03■■□□□ 1.76
NME1-208ENST00000487481 HSPA2P54652 639 aa26.02■■□□□ 1.76
NME1-208ENST00000487481 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
NME1-208ENST00000487481 ZFYVE16Q7Z3T8 1539 aa25.98■■□□□ 1.75
NME1-208ENST00000487481 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
NME1-208ENST00000487481 CERKQ8TCT0 537 aa25.96■■□□□ 1.75
NME1-208ENST00000487481 FER1L4A9Z1Z3 1794 aa25.95■■□□□ 1.75
NME1-208ENST00000487481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.95■■□□□ 1.741e-6■■■■□ 21.2
NME1-208ENST00000487481 MAGI2Q86UL8 1455 aa25.95■■□□□ 1.74
NME1-208ENST00000487481 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
NME1-208ENST00000487481 TTC37Q6PGP7 1564 aa25.94■■□□□ 1.74
NME1-208ENST00000487481 YEATS2Q9ULM3 1422 aa25.93■■□□□ 1.74
NME1-208ENST00000487481 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
NME1-208ENST00000487481 HECW1Q76N89 1606 aa25.88■■□□□ 1.73
NME1-208ENST00000487481 CSRNP3Q8WYN3 585 aa25.86■■□□□ 1.73
NME1-208ENST00000487481 PREX1Q8TCU6 1659 aa25.85■■□□□ 1.73
NME1-208ENST00000487481 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.73
NME1-208ENST00000487481 MLECQ14165 292 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms