RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
CDK11A-217ENST00000487462 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
CDK11A-217ENST00000487462 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
CDK11A-217ENST00000487462 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
CDK11A-217ENST00000487462 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
CDK11A-217ENST00000487462 CUX1P39880 1505 aa18.16■□□□□ 0.5
CDK11A-217ENST00000487462 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
CDK11A-217ENST00000487462 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
CDK11A-217ENST00000487462 ABCC10Q5T3U5 1492 aa18.12■□□□□ 0.49
CDK11A-217ENST00000487462 KDM6BO15054 1643 aa18.12■□□□□ 0.49
CDK11A-217ENST00000487462 GRIN2AQ12879 1464 aa18.11■□□□□ 0.49
CDK11A-217ENST00000487462 DIP2BQ9P265 1576 aa18.09■□□□□ 0.49
CDK11A-217ENST00000487462 NUP160Q12769 1436 aa18.09■□□□□ 0.49
CDK11A-217ENST00000487462 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
CDK11A-217ENST00000487462 FAM69CQ0P6D2 419 aa18.06■□□□□ 0.48
CDK11A-217ENST00000487462 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
CDK11A-217ENST00000487462 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
CDK11A-217ENST00000487462 HECW2Q9P2P5 1572 aa18.03■□□□□ 0.48
CDK11A-217ENST00000487462 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
CDK11A-217ENST00000487462 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
CDK11A-217ENST00000487462 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
CDK11A-217ENST00000487462 ADGRL1O94910 1474 aa17.97■□□□□ 0.47
CDK11A-217ENST00000487462 PRG4Q92954 1404 aaPredicted RBP17.95■□□□□ 0.46
CDK11A-217ENST00000487462 ADCY10Q96PN6 1610 aa17.94■□□□□ 0.46
CDK11A-217ENST00000487462 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
CDK11A-217ENST00000487462 NPM1P06748 294 aaKnown RBP eCLIP17.84■□□□□ 0.45
CDK11A-217ENST00000487462 PPRC1Q5VV67 1664 aaKnown RBP17.83■□□□□ 0.45
CDK11A-217ENST00000487462 FBXO41Q8TF61 875 aa17.83■□□□□ 0.44
CDK11A-217ENST00000487462 RUSC2Q8N2Y8 1516 aa17.82■□□□□ 0.44
CDK11A-217ENST00000487462 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
CDK11A-217ENST00000487462 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
CDK11A-217ENST00000487462 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
CDK11A-217ENST00000487462 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
CDK11A-217ENST00000487462 COL17A1Q9UMD9 1497 aaPredicted RBP17.72■□□□□ 0.43
CDK11A-217ENST00000487462 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
CDK11A-217ENST00000487462 GLI2P10070 1586 aa17.69■□□□□ 0.42
CDK11A-217ENST00000487462 BIVM-ERCC5R4GMW8 1640 aa17.65■□□□□ 0.42
CDK11A-217ENST00000487462 LMTK3Q96Q04 1460 aa17.65■□□□□ 0.42
CDK11A-217ENST00000487462 TOP2BQ02880 1626 aa17.63■□□□□ 0.41
CDK11A-217ENST00000487462 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
CDK11A-217ENST00000487462 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
CDK11A-217ENST00000487462 ABCC2Q92887 1545 aa17.6■□□□□ 0.41
CDK11A-217ENST00000487462 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.41
CDK11A-217ENST00000487462 CUL7Q14999 1698 aa17.58■□□□□ 0.4
CDK11A-217ENST00000487462 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
CDK11A-217ENST00000487462 TEX14Q8IWB6 1497 aa17.52■□□□□ 0.4
CDK11A-217ENST00000487462 PTPRGP23470 1445 aa17.52■□□□□ 0.4
CDK11A-217ENST00000487462 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.39
CDK11A-217ENST00000487462 SOCS7O14512 581 aa17.48■□□□□ 0.39
CDK11A-217ENST00000487462 ILDR2Q71H61 639 aa17.48■□□□□ 0.39
CDK11A-217ENST00000487462 KIF21BO75037 1637 aa17.47■□□□□ 0.39
CDK11A-217ENST00000487462 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
CDK11A-217ENST00000487462 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
CDK11A-217ENST00000487462 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
CDK11A-217ENST00000487462 KDM5BQ9UGL1 1544 aa17.41■□□□□ 0.38
CDK11A-217ENST00000487462 ZCCHC11Q5TAX3 1644 aaKnown RBP17.4■□□□□ 0.38
CDK11A-217ENST00000487462 PTPRMP28827 1452 aa17.38■□□□□ 0.37
CDK11A-217ENST00000487462 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
CDK11A-217ENST00000487462 ADAMTSL3P82987 1691 aa17.38■□□□□ 0.37
CDK11A-217ENST00000487462 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
CDK11A-217ENST00000487462 DISP3Q9P2K9 1392 aa17.36■□□□□ 0.37
CDK11A-217ENST00000487462 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
CDK11A-217ENST00000487462 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
CDK11A-217ENST00000487462 IGF1RP08069 1367 aa17.31■□□□□ 0.36
CDK11A-217ENST00000487462 CFAP43Q8NDM7 1665 aa17.31■□□□□ 0.36
CDK11A-217ENST00000487462 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
CDK11A-217ENST00000487462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDK11A-217ENST00000487462 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
CDK11A-217ENST00000487462 DISP1Q96F81 1524 aa17.3■□□□□ 0.36
CDK11A-217ENST00000487462 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
CDK11A-217ENST00000487462 MADDQ8WXG6 1647 aa17.25■□□□□ 0.35
CDK11A-217ENST00000487462 BCORL1Q5H9F3 1711 aa17.24■□□□□ 0.35
CDK11A-217ENST00000487462 SPATA31D1Q6ZQQ2 1576 aa17.24■□□□□ 0.35
CDK11A-217ENST00000487462 CERKQ8TCT0 537 aa17.24■□□□□ 0.35
CDK11A-217ENST00000487462 ARAP3Q8WWN8 1544 aa17.21■□□□□ 0.35
CDK11A-217ENST00000487462 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
CDK11A-217ENST00000487462 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
CDK11A-217ENST00000487462 HSPA2P54652 639 aa17.16■□□□□ 0.34
CDK11A-217ENST00000487462 RIMS1Q86UR5 1692 aaKnown RBP17.16■□□□□ 0.34
CDK11A-217ENST00000487462 UGGT2Q9NYU1 1516 aa17.16■□□□□ 0.34
CDK11A-217ENST00000487462 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
CDK11A-217ENST00000487462 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
CDK11A-217ENST00000487462 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
CDK11A-217ENST00000487462 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
CDK11A-217ENST00000487462 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
CDK11A-217ENST00000487462 FRMPD1Q5SYB0 1578 aa17.1■□□□□ 0.33
CDK11A-217ENST00000487462 ABCA8O94911 1581 aa17.06■□□□□ 0.32
CDK11A-217ENST00000487462 RAPGEF3O95398 923 aa17.04■□□□□ 0.32
CDK11A-217ENST00000487462 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
CDK11A-217ENST00000487462 ARID4BQ4LE39 1312 aaPredicted RBP17.02■□□□□ 0.32
CDK11A-217ENST00000487462 ABCA9Q8IUA7 1624 aa17.02■□□□□ 0.31
CDK11A-217ENST00000487462 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
CDK11A-217ENST00000487462 SIGLEC1Q9BZZ2 1709 aa17■□□□□ 0.31
CDK11A-217ENST00000487462 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
CDK11A-217ENST00000487462 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
CDK11A-217ENST00000487462 NEO1Q92859 1461 aa16.97■□□□□ 0.31
CDK11A-217ENST00000487462 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
CDK11A-217ENST00000487462 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
CDK11A-217ENST00000487462 ZBTB22O15209 634 aa16.94■□□□□ 0.3
CDK11A-217ENST00000487462 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms