RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 KIF13AQ9H1H9 1805 aa34.54■■■■□ 3.12
SMPDL3A-202ENST00000487215 ABCC10Q5T3U5 1492 aa34.38■■■■□ 3.09
SMPDL3A-202ENST00000487215 IGF1RP08069 1367 aa34.37■■■■□ 3.09
SMPDL3A-202ENST00000487215 MAPKBP1O60336 1514 aa34.37■■■■□ 3.09
SMPDL3A-202ENST00000487215 KIAA0586Q9BVV6 1533 aa34.37■■■■□ 3.09
SMPDL3A-202ENST00000487215 NPM1P06748 294 aaKnown RBP eCLIP34.36■■■■□ 3.09
SMPDL3A-202ENST00000487215 ADCY10Q96PN6 1610 aa34.35■■■■□ 3.09
SMPDL3A-202ENST00000487215 KIF27Q86VH2 1401 aa34.35■■■■□ 3.09
SMPDL3A-202ENST00000487215 FAM69CQ0P6D2 419 aa34.34■■■■□ 3.09
SMPDL3A-202ENST00000487215 CUL7Q14999 1698 aa34.32■■■■□ 3.08
SMPDL3A-202ENST00000487215 DIP2BQ9P265 1576 aa34.29■■■■□ 3.08
SMPDL3A-202ENST00000487215 CARMIL1Q5VZK9 1371 aa34.13■■■■□ 3.05
SMPDL3A-202ENST00000487215 PTPRGP23470 1445 aa34.11■■■■□ 3.05
SMPDL3A-202ENST00000487215 KDM6BO15054 1643 aa34.06■■■■□ 3.04
SMPDL3A-202ENST00000487215 CARMIL2Q6F5E8 1435 aa34.03■■■■□ 3.04
SMPDL3A-202ENST00000487215 TTBK1Q5TCY1 1321 aaPredicted RBP34.03■■■■□ 3.04
SMPDL3A-202ENST00000487215 TNIKQ9UKE5 1360 aa34.02■■■■□ 3.04
SMPDL3A-202ENST00000487215 TSPOAP1O95153 1857 aa34■■■■□ 3.03
SMPDL3A-202ENST00000487215 IQGAP2Q13576 1575 aa34■■■■□ 3.03
SMPDL3A-202ENST00000487215 ABCC2Q92887 1545 aa33.98■■■■□ 3.03
SMPDL3A-202ENST00000487215 ASXL2Q76L83 1435 aa33.89■■■■□ 3.02
SMPDL3A-202ENST00000487215 UHRF1BP1LA0JNW5 1464 aa33.88■■■■□ 3.01
SMPDL3A-202ENST00000487215 DISP1Q96F81 1524 aa33.88■■■■□ 3.01
SMPDL3A-202ENST00000487215 PLB1Q6P1J6 1458 aa33.87■■■■□ 3.01
SMPDL3A-202ENST00000487215 KDM4FA0A1W2PPD8 638 aa33.86■■■■□ 3.01
SMPDL3A-202ENST00000487215 UACAQ9BZF9 1416 aa33.85■■■■□ 3.01
SMPDL3A-202ENST00000487215 GLI2P10070 1586 aa33.84■■■■□ 3.01
SMPDL3A-202ENST00000487215 RAPGEF2Q9Y4G8 1499 aa33.8■■■■□ 3
SMPDL3A-202ENST00000487215 PPRC1Q5VV67 1664 aaKnown RBP33.8■■■■□ 3
SMPDL3A-202ENST00000487215 UGGT2Q9NYU1 1516 aa33.78■■■■□ 3
SMPDL3A-202ENST00000487215 KDM5BQ9UGL1 1544 aa33.74■■■□□ 2.99
SMPDL3A-202ENST00000487215 KIAA0556O60303 1618 aa33.71■■■□□ 2.99
SMPDL3A-202ENST00000487215 EPRSP07814 1512 aaKnown RBP33.69■■■□□ 2.98
SMPDL3A-202ENST00000487215 ZCCHC11Q5TAX3 1644 aaKnown RBP33.66■■■□□ 2.98
SMPDL3A-202ENST00000487215 MAP3K4Q9Y6R4 1608 aa33.64■■■□□ 2.98
SMPDL3A-202ENST00000487215 COL17A1Q9UMD9 1497 aaPredicted RBP33.61■■■□□ 2.97
SMPDL3A-202ENST00000487215 TEX14Q8IWB6 1497 aa33.56■■■□□ 2.96
SMPDL3A-202ENST00000487215 ADGRL1O94910 1474 aa33.53■■■□□ 2.96
SMPDL3A-202ENST00000487215 CTTNBP2Q8WZ74 1663 aa33.52■■■□□ 2.96
SMPDL3A-202ENST00000487215 WDR7Q9Y4E6 1490 aa33.51■■■□□ 2.96
SMPDL3A-202ENST00000487215 GOLGA3Q08378 1498 aa33.46■■■□□ 2.95
SMPDL3A-202ENST00000487215 ABCA8O94911 1581 aa33.43■■■□□ 2.94
SMPDL3A-202ENST00000487215 PRXQ9BXM0 1461 aa33.38■■■□□ 2.93
SMPDL3A-202ENST00000487215 CD109Q6YHK3 1445 aa33.34■■■□□ 2.93
SMPDL3A-202ENST00000487215 MAGI3Q5TCQ9 1506 aa33.33■■■□□ 2.93
SMPDL3A-202ENST00000487215 CFAP43Q8NDM7 1665 aa33.33■■■□□ 2.93
SMPDL3A-202ENST00000487215 KCNH8Q96L42 1107 aa33.3■■■□□ 2.92
SMPDL3A-202ENST00000487215 HECW2Q9P2P5 1572 aa33.17■■■□□ 2.9
SMPDL3A-202ENST00000487215 ARID3CA6NKF2 412 aa33.14■■■□□ 2.9
SMPDL3A-202ENST00000487215 ILDR1Q86SU0 546 aaPredicted RBP33.14■■■□□ 2.9
SMPDL3A-202ENST00000487215 P3H3Q8IVL6 736 aa33.14■■■□□ 2.9
SMPDL3A-202ENST00000487215 ATP10BO94823 1461 aa33.13■■■□□ 2.89
SMPDL3A-202ENST00000487215 FAM9AQ8IZU1 332 aaPredicted RBP33.09■■■□□ 2.89
SMPDL3A-202ENST00000487215 ARAP3Q8WWN8 1544 aa33.08■■■□□ 2.89
SMPDL3A-202ENST00000487215 SAMD9Q5K651 1589 aa33.06■■■□□ 2.88
SMPDL3A-202ENST00000487215 KIF21BO75037 1637 aa33.06■■■□□ 2.88
SMPDL3A-202ENST00000487215 ABCA9Q8IUA7 1624 aa33.02■■■□□ 2.88
SMPDL3A-202ENST00000487215 CSRNP3Q8WYN3 585 aa33.01■■■□□ 2.87
SMPDL3A-202ENST00000487215 RAPGEF6Q8TEU7 1601 aa32.99■■■□□ 2.87
SMPDL3A-202ENST00000487215 PHLDB1Q86UU1 1377 aa32.96■■■□□ 2.87
SMPDL3A-202ENST00000487215 NEO1Q92859 1461 aa32.89■■■□□ 2.86
SMPDL3A-202ENST00000487215 NUP153P49790 1475 aaKnown RBP32.88■■■□□ 2.85
SMPDL3A-202ENST00000487215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.88■■■□□ 2.85
SMPDL3A-202ENST00000487215 HNRNPUL2Q1KMD3 747 aaKnown RBP32.88■■■□□ 2.85
SMPDL3A-202ENST00000487215 RAPGEF3O95398 923 aa32.87■■■□□ 2.85
SMPDL3A-202ENST00000487215 FHOD3Q2V2M9 1422 aa32.84■■■□□ 2.85
SMPDL3A-202ENST00000487215 EEA1Q15075 1411 aa32.83■■■□□ 2.85
SMPDL3A-202ENST00000487215 FRMPD1Q5SYB0 1578 aa32.82■■■□□ 2.84
SMPDL3A-202ENST00000487215 RANGAP1P46060 587 aaPredicted RBP32.81■■■□□ 2.84
SMPDL3A-202ENST00000487215 ADAMTSL3P82987 1691 aa32.81■■■□□ 2.84
SMPDL3A-202ENST00000487215 PTPRMP28827 1452 aa32.78■■■□□ 2.84
SMPDL3A-202ENST00000487215 BCORL1Q5H9F3 1711 aa32.7■■■□□ 2.83
SMPDL3A-202ENST00000487215 PLEKHD1A6NEE1 506 aa32.69■■■□□ 2.82
SMPDL3A-202ENST00000487215 ARID4BQ4LE39 1312 aaPredicted RBP32.66■■■□□ 2.82
SMPDL3A-202ENST00000487215 DENND4BO75064 1496 aaPredicted RBP32.66■■■□□ 2.82
SMPDL3A-202ENST00000487215 EFCAB5A4FU69 1503 aa32.66■■■□□ 2.82
SMPDL3A-202ENST00000487215 ARHGEF40Q8TER5 1519 aa32.66■■■□□ 2.82
SMPDL3A-202ENST00000487215 MADDQ8WXG6 1647 aa32.66■■■□□ 2.82
SMPDL3A-202ENST00000487215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.64■■■□□ 2.82
SMPDL3A-202ENST00000487215 AKNAQ7Z591 1439 aa32.63■■■□□ 2.81
SMPDL3A-202ENST00000487215 RICTORQ6R327 1708 aa32.63■■■□□ 2.81
SMPDL3A-202ENST00000487215 FANCAO15360 1455 aa32.62■■■□□ 2.81
SMPDL3A-202ENST00000487215 CFAP74Q9C0B2 1584 aa32.61■■■□□ 2.81
SMPDL3A-202ENST00000487215 TTC37Q6PGP7 1564 aa32.59■■■□□ 2.81
SMPDL3A-202ENST00000487215 PCF11O94913 1555 aaKnown RBP32.54■■■□□ 2.8
SMPDL3A-202ENST00000487215 CDK13Q14004 1512 aaKnown RBP32.54■■■□□ 2.8
SMPDL3A-202ENST00000487215 ZMYM4Q5VZL5 1548 aa32.53■■■□□ 2.8
SMPDL3A-202ENST00000487215 RIMS1Q86UR5 1692 aaKnown RBP32.51■■■□□ 2.79
SMPDL3A-202ENST00000487215 LMTK3Q96Q04 1460 aa32.51■■■□□ 2.79
SMPDL3A-202ENST00000487215 ZFYVE16Q7Z3T8 1539 aa32.47■■■□□ 2.79
SMPDL3A-202ENST00000487215 FBXO41Q8TF61 875 aa32.47■■■□□ 2.79
SMPDL3A-202ENST00000487215 YEATS2Q9ULM3 1422 aa32.47■■■□□ 2.79
SMPDL3A-202ENST00000487215 SIGLEC1Q9BZZ2 1709 aa32.44■■■□□ 2.78
SMPDL3A-202ENST00000487215 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
SMPDL3A-202ENST00000487215 MAGI2Q86UL8 1455 aa32.43■■■□□ 2.78
SMPDL3A-202ENST00000487215 PLCH2O75038 1416 aa32.42■■■□□ 2.78
SMPDL3A-202ENST00000487215 HECW1Q76N89 1606 aa32.41■■■□□ 2.78
SMPDL3A-202ENST00000487215 SCAPERQ9BY12 1400 aa32.39■■■□□ 2.78
SMPDL3A-202ENST00000487215 FMN1Q68DA7 1419 aa32.36■■■□□ 2.77
SMPDL3A-202ENST00000487215 EHMT2Q96KQ7 1210 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 416.6 ms