RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 CTTNBP2Q8WZ74 1663 aa33.68■■■□□ 2.98
TRADD-202ENST00000486556 PPARGC1BQ86YN6 1023 aaKnown RBP33.64■■■□□ 2.98
TRADD-202ENST00000486556 APLP2Q06481 763 aa33.6■■■□□ 2.97
TRADD-202ENST00000486556 EFCAB5A4FU69 1503 aa33.56■■■□□ 2.96
TRADD-202ENST00000486556 SNAPC4Q5SXM2 1469 aa33.56■■■□□ 2.96
TRADD-202ENST00000486556 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
TRADD-202ENST00000486556 SYNJ2O15056 1496 aa33.42■■■□□ 2.94
TRADD-202ENST00000486556 GRIN2AQ12879 1464 aa33.41■■■□□ 2.94
TRADD-202ENST00000486556 CHMP7Q8WUX9 453 aaPredicted RBP33.38■■■□□ 2.93
TRADD-202ENST00000486556 SAMD9Q5K651 1589 aa33.37■■■□□ 2.93
TRADD-202ENST00000486556 P3H3Q8IVL6 736 aa33.37■■■□□ 2.93
TRADD-202ENST00000486556 IQGAP2Q13576 1575 aa33.37■■■□□ 2.93
TRADD-202ENST00000486556 FHOD3Q2V2M9 1422 aa33.34■■■□□ 2.93
TRADD-202ENST00000486556 KIAA0586Q9BVV6 1533 aa33.34■■■□□ 2.93
TRADD-202ENST00000486556 TTBK1Q5TCY1 1321 aaPredicted RBP33.32■■■□□ 2.92
TRADD-202ENST00000486556 FMN1Q68DA7 1419 aa33.31■■■□□ 2.92
TRADD-202ENST00000486556 MAP3K1Q13233 1512 aa33.29■■■□□ 2.92
TRADD-202ENST00000486556 UGGT2Q9NYU1 1516 aa33.24■■■□□ 2.91
TRADD-202ENST00000486556 FBLN2P98095 1184 aa33.23■■■□□ 2.91
TRADD-202ENST00000486556 CASKIN1Q8WXD9 1431 aa33.22■■■□□ 2.91
TRADD-202ENST00000486556 FYCO1Q9BQS8 1478 aa33.2■■■□□ 2.91
TRADD-202ENST00000486556 NUP160Q12769 1436 aa33.19■■■□□ 2.9
TRADD-202ENST00000486556 KANK4Q5T7N3 995 aaPredicted RBP33.18■■■□□ 2.9
TRADD-202ENST00000486556 PCF11O94913 1555 aaKnown RBP33.16■■■□□ 2.9
TRADD-202ENST00000486556 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
TRADD-202ENST00000486556 TIAM1Q13009 1591 aa33.15■■■□□ 2.9
TRADD-202ENST00000486556 ATP1B4Q9UN42 357 aaPredicted RBP33.07■■■□□ 2.88
TRADD-202ENST00000486556 DISP1Q96F81 1524 aa33.04■■■□□ 2.88
TRADD-202ENST00000486556 LRRC9Q6ZRR7 1453 aa33.03■■■□□ 2.88
TRADD-202ENST00000486556 CFAP43Q8NDM7 1665 aa33.02■■■□□ 2.88
TRADD-202ENST00000486556 HRCP23327 699 aa33.02■■■□□ 2.88
TRADD-202ENST00000486556 JPH4Q96JJ6 628 aa33.01■■■□□ 2.87
TRADD-202ENST00000486556 KIAA0556O60303 1618 aa33.01■■■□□ 2.87
TRADD-202ENST00000486556 CARMIL2Q6F5E8 1435 aa32.94■■■□□ 2.86
TRADD-202ENST00000486556 CHD1O14646 1710 aa32.91■■■□□ 2.86
TRADD-202ENST00000486556 RRBP1Q9P2E9 1410 aaKnown RBP32.88■■■□□ 2.85
TRADD-202ENST00000486556 CCDC18Q5T9S5 1454 aa32.87■■■□□ 2.85
TRADD-202ENST00000486556 HECW1Q76N89 1606 aa32.86■■■□□ 2.85
TRADD-202ENST00000486556 LRRIQ1Q96JM4 1722 aa32.81■■■□□ 2.84
TRADD-202ENST00000486556 MTUS2Q5JR59 1369 aa32.78■■■□□ 2.84
TRADD-202ENST00000486556 CCNB3Q8WWL7 1395 aa32.77■■■□□ 2.84
TRADD-202ENST00000486556 EPRSP07814 1512 aaKnown RBP32.76■■■□□ 2.84
TRADD-202ENST00000486556 HNRNPUL2Q1KMD3 747 aaKnown RBP32.72■■■□□ 2.83
TRADD-202ENST00000486556 PHLDB1Q86UU1 1377 aa32.71■■■□□ 2.83
TRADD-202ENST00000486556 RAPGEF6Q8TEU7 1601 aa32.71■■■□□ 2.83
TRADD-202ENST00000486556 PRG4Q92954 1404 aaPredicted RBP32.71■■■□□ 2.83
TRADD-202ENST00000486556 ZEB1P37275 1124 aaPredicted RBP32.7■■■□□ 2.82
TRADD-202ENST00000486556 EHBP1L1Q8N3D4 1523 aa32.69■■■□□ 2.82
TRADD-202ENST00000486556 SHROOM2Q13796 1616 aa32.68■■■□□ 2.82
TRADD-202ENST00000486556 NUP153P49790 1475 aaKnown RBP32.65■■■□□ 2.82
TRADD-202ENST00000486556 SUPT6HQ7KZ85 1726 aaKnown RBP32.6■■■□□ 2.81
TRADD-202ENST00000486556 CDK13Q14004 1512 aaKnown RBP32.6■■■□□ 2.81
TRADD-202ENST00000486556 PLB1Q6P1J6 1458 aa32.6■■■□□ 2.81
TRADD-202ENST00000486556 CDK11AQ9UQ88 783 aaPredicted RBP32.59■■■□□ 2.81
TRADD-202ENST00000486556 CLASP1Q7Z460 1538 aa32.59■■■□□ 2.81
TRADD-202ENST00000486556 MAGI3Q5TCQ9 1506 aa32.58■■■□□ 2.81
TRADD-202ENST00000486556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.58■■■□□ 2.81
TRADD-202ENST00000486556 NCOA2Q15596 1464 aa32.57■■■□□ 2.81
TRADD-202ENST00000486556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.57■■■□□ 2.8
TRADD-202ENST00000486556 PTPRGP23470 1445 aa32.57■■■□□ 2.8
TRADD-202ENST00000486556 ABCA8O94911 1581 aa32.55■■■□□ 2.8
TRADD-202ENST00000486556 CCER1Q8TC90 406 aaPredicted RBP32.54■■■□□ 2.8
TRADD-202ENST00000486556 ARHGEF11O15085 1522 aa32.53■■■□□ 2.8
TRADD-202ENST00000486556 ARID3CA6NKF2 412 aa32.49■■■□□ 2.79
TRADD-202ENST00000486556 FGD6Q6ZV73 1430 aa32.49■■■□□ 2.79
TRADD-202ENST00000486556 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
TRADD-202ENST00000486556 FAM50AQ14320 339 aaKnown RBP32.46■■■□□ 2.79
TRADD-202ENST00000486556 TROQ12816 1431 aaPredicted RBP32.39■■■□□ 2.77
TRADD-202ENST00000486556 UACAQ9BZF9 1416 aa32.38■■■□□ 2.77
TRADD-202ENST00000486556 ITGAEP38570 1179 aa32.37■■■□□ 2.77
TRADD-202ENST00000486556 ATP10BO94823 1461 aa32.37■■■□□ 2.77
TRADD-202ENST00000486556 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
TRADD-202ENST00000486556 MIA2Q96PC5 1412 aa32.35■■■□□ 2.77
TRADD-202ENST00000486556 PLEKHD1A6NEE1 506 aa32.33■■■□□ 2.77
TRADD-202ENST00000486556 OSCARQ8IYS5 282 aa32.33■■■□□ 2.77
TRADD-202ENST00000486556 TCOF1Q13428 1488 aaKnown RBP32.28■■■□□ 2.76
TRADD-202ENST00000486556 PTPN23Q9H3S7 1636 aa32.28■■■□□ 2.76
TRADD-202ENST00000486556 ADCY10Q96PN6 1610 aa32.25■■■□□ 2.75
TRADD-202ENST00000486556 ABCC2Q92887 1545 aa32.24■■■□□ 2.75
TRADD-202ENST00000486556 SETD5Q9C0A6 1442 aa32.21■■■□□ 2.75
TRADD-202ENST00000486556 UHRF1BP1LA0JNW5 1464 aa32.2■■■□□ 2.75
TRADD-202ENST00000486556 RAB3GAP2Q9H2M9 1393 aa32.14■■■□□ 2.74
TRADD-202ENST00000486556 CLSPNQ9HAW4 1339 aa32.13■■■□□ 2.73
TRADD-202ENST00000486556 KIF14Q15058 1648 aa32.12■■■□□ 2.73
TRADD-202ENST00000486556 GPATCH8Q9UKJ3 1502 aaKnown RBP32.11■■■□□ 2.73
TRADD-202ENST00000486556 DHX57Q6P158 1386 aaKnown RBP32.1■■■□□ 2.73
TRADD-202ENST00000486556 ITSN2Q9NZM3 1697 aa32.1■■■□□ 2.73
TRADD-202ENST00000486556 PTPRKQ15262 1439 aa32.1■■■□□ 2.73
TRADD-202ENST00000486556 CFDP1Q9UEE9 299 aaPredicted RBP32.08■■■□□ 2.73
TRADD-202ENST00000486556 ABCC10Q5T3U5 1492 aa32.07■■■□□ 2.72
TRADD-202ENST00000486556 KDM5BQ9UGL1 1544 aa32.06■■■□□ 2.72
TRADD-202ENST00000486556 HFM1A2PYH4 1435 aa32.04■■■□□ 2.72
TRADD-202ENST00000486556 AKNAQ7Z591 1439 aa31.97■■■□□ 2.71
TRADD-202ENST00000486556 ZCCHC11Q5TAX3 1644 aaKnown RBP31.96■■■□□ 2.71
TRADD-202ENST00000486556 ZNF644Q9H582 1327 aaPredicted RBP31.96■■■□□ 2.71
TRADD-202ENST00000486556 CDC42BPAQ5VT25 1732 aa31.94■■■□□ 2.7
TRADD-202ENST00000486556 DAPK1P53355 1430 aa31.94■■■□□ 2.7
TRADD-202ENST00000486556 NAIPQ13075 1403 aa31.94■■■□□ 2.7
TRADD-202ENST00000486556 DNMT1P26358 1616 aaKnown RBP31.94■■■□□ 2.7
TRADD-202ENST00000486556 CAMSAP2Q08AD1 1489 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms