RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MAPKBP1O60336 1514 aa28.51■■■□□ 2.15
U2AF1-211ENST00000486519 ADCY10Q96PN6 1610 aa28.48■■■□□ 2.15
U2AF1-211ENST00000486519 FHAD1B1AJZ9 1412 aa28.46■■■□□ 2.15
U2AF1-211ENST00000486519 JPH4Q96JJ6 628 aa28.39■■■□□ 2.14
U2AF1-211ENST00000486519 ADGRL1O94910 1474 aa28.34■■■□□ 2.13
U2AF1-211ENST00000486519 RUSC2Q8N2Y8 1516 aa28.34■■■□□ 2.13
U2AF1-211ENST00000486519 HECW2Q9P2P5 1572 aa28.34■■■□□ 2.13
U2AF1-211ENST00000486519 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
U2AF1-211ENST00000486519 NPM1P06748 294 aaKnown RBP eCLIP28.31■■■□□ 2.12
U2AF1-211ENST00000486519 ERICH3Q5RHP9 1530 aa28.31■■■□□ 2.12
U2AF1-211ENST00000486519 PPRC1Q5VV67 1664 aaKnown RBP28.26■■■□□ 2.12
U2AF1-211ENST00000486519 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
U2AF1-211ENST00000486519 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
U2AF1-211ENST00000486519 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
U2AF1-211ENST00000486519 GLI2P10070 1586 aa28■■■□□ 2.07
U2AF1-211ENST00000486519 ASXL2Q76L83 1435 aa27.97■■■□□ 2.07
U2AF1-211ENST00000486519 CUL7Q14999 1698 aa27.97■■■□□ 2.07
U2AF1-211ENST00000486519 KIAA0586Q9BVV6 1533 aa27.96■■■□□ 2.07
U2AF1-211ENST00000486519 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.07
U2AF1-211ENST00000486519 ABCC2Q92887 1545 aa27.92■■■□□ 2.06
U2AF1-211ENST00000486519 FBXO41Q8TF61 875 aa27.92■■■□□ 2.06
U2AF1-211ENST00000486519 PTPRGP23470 1445 aa27.9■■■□□ 2.06
U2AF1-211ENST00000486519 MAP3K4Q9Y6R4 1608 aa27.89■■■□□ 2.06
U2AF1-211ENST00000486519 PLB1Q6P1J6 1458 aa27.87■■■□□ 2.05
U2AF1-211ENST00000486519 EPRSP07814 1512 aaKnown RBP27.81■■■□□ 2.04
U2AF1-211ENST00000486519 TNIKQ9UKE5 1360 aa27.74■■■□□ 2.03
U2AF1-211ENST00000486519 UHRF1BP1LA0JNW5 1464 aa27.73■■■□□ 2.03
U2AF1-211ENST00000486519 IGF1RP08069 1367 aa27.73■■■□□ 2.03
U2AF1-211ENST00000486519 TEX14Q8IWB6 1497 aa27.7■■■□□ 2.03
U2AF1-211ENST00000486519 ZCCHC11Q5TAX3 1644 aaKnown RBP27.7■■■□□ 2.02
U2AF1-211ENST00000486519 KIF21BO75037 1637 aa27.69■■■□□ 2.02
U2AF1-211ENST00000486519 UACAQ9BZF9 1416 aa27.67■■■□□ 2.02
U2AF1-211ENST00000486519 KDM5BQ9UGL1 1544 aa27.65■■■□□ 2.02
U2AF1-211ENST00000486519 CARMIL2Q6F5E8 1435 aa27.62■■■□□ 2.01
U2AF1-211ENST00000486519 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
U2AF1-211ENST00000486519 DISP1Q96F81 1524 aa27.6■■■□□ 2.01
U2AF1-211ENST00000486519 IQGAP2Q13576 1575 aa27.59■■■□□ 2.01
U2AF1-211ENST00000486519 LMTK3Q96Q04 1460 aa27.56■■■□□ 2
U2AF1-211ENST00000486519 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
U2AF1-211ENST00000486519 WDR7Q9Y4E6 1490 aa27.49■■□□□ 1.99
U2AF1-211ENST00000486519 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
U2AF1-211ENST00000486519 ADAMTSL3P82987 1691 aa27.47■■□□□ 1.99
U2AF1-211ENST00000486519 PTPRMP28827 1452 aa27.46■■□□□ 1.99
U2AF1-211ENST00000486519 CFAP43Q8NDM7 1665 aa27.45■■□□□ 1.98
U2AF1-211ENST00000486519 MAGI3Q5TCQ9 1506 aa27.45■■□□□ 1.98
U2AF1-211ENST00000486519 CD109Q6YHK3 1445 aa27.42■■□□□ 1.98
U2AF1-211ENST00000486519 ILDR2Q71H61 639 aa27.42■■□□□ 1.98
U2AF1-211ENST00000486519 KIAA0556O60303 1618 aa27.4■■□□□ 1.98
U2AF1-211ENST00000486519 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.97
U2AF1-211ENST00000486519 UGGT2Q9NYU1 1516 aa27.36■■□□□ 1.97
U2AF1-211ENST00000486519 KCNH8Q96L42 1107 aa27.33■■□□□ 1.97
U2AF1-211ENST00000486519 MADDQ8WXG6 1647 aa27.32■■□□□ 1.96
U2AF1-211ENST00000486519 BCORL1Q5H9F3 1711 aa27.29■■□□□ 1.96
U2AF1-211ENST00000486519 ARAP3Q8WWN8 1544 aa27.27■■□□□ 1.96
U2AF1-211ENST00000486519 SOCS7O14512 581 aa27.24■■□□□ 1.95
U2AF1-211ENST00000486519 ABCA8O94911 1581 aa27.22■■□□□ 1.95
U2AF1-211ENST00000486519 HSPA2P54652 639 aa27.21■■□□□ 1.95
U2AF1-211ENST00000486519 RIMS1Q86UR5 1692 aaKnown RBP27.2■■□□□ 1.94
U2AF1-211ENST00000486519 DISP3Q9P2K9 1392 aa27.2■■□□□ 1.94
U2AF1-211ENST00000486519 CERKQ8TCT0 537 aa27.16■■□□□ 1.94
U2AF1-211ENST00000486519 FRMPD1Q5SYB0 1578 aa27.16■■□□□ 1.94
U2AF1-211ENST00000486519 RAPGEF3O95398 923 aa27.14■■□□□ 1.94
U2AF1-211ENST00000486519 RAPGEF2Q9Y4G8 1499 aa27.1■■□□□ 1.93
U2AF1-211ENST00000486519 ARID3CA6NKF2 412 aa27.07■■□□□ 1.92
U2AF1-211ENST00000486519 CTTNBP2Q8WZ74 1663 aa27.07■■□□□ 1.92
U2AF1-211ENST00000486519 ABCA9Q8IUA7 1624 aa27.06■■□□□ 1.92
U2AF1-211ENST00000486519 ARID4BQ4LE39 1312 aaPredicted RBP27.05■■□□□ 1.92
U2AF1-211ENST00000486519 SIGLEC1Q9BZZ2 1709 aa27.04■■□□□ 1.92
U2AF1-211ENST00000486519 PLPPR3Q6T4P5 718 aa27.04■■□□□ 1.92
U2AF1-211ENST00000486519 SPATA31D1Q6ZQQ2 1576 aa27■■□□□ 1.91
U2AF1-211ENST00000486519 ARHGEF40Q8TER5 1519 aa26.98■■□□□ 1.91
U2AF1-211ENST00000486519 ATP10BO94823 1461 aa26.97■■□□□ 1.91
U2AF1-211ENST00000486519 NEO1Q92859 1461 aa26.93■■□□□ 1.9
U2AF1-211ENST00000486519 RICTORQ6R327 1708 aa26.92■■□□□ 1.9
U2AF1-211ENST00000486519 PHLDB1Q86UU1 1377 aa26.92■■□□□ 1.9
U2AF1-211ENST00000486519 GOLGA3Q08378 1498 aa26.92■■□□□ 1.9
U2AF1-211ENST00000486519 STRCQ7RTU9 1775 aa26.85■■□□□ 1.89
U2AF1-211ENST00000486519 FER1L4A9Z1Z3 1794 aa26.84■■□□□ 1.89
U2AF1-211ENST00000486519 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
U2AF1-211ENST00000486519 YEATS2Q9ULM3 1422 aa26.79■■□□□ 1.88
U2AF1-211ENST00000486519 P3H3Q8IVL6 736 aa26.78■■□□□ 1.88
U2AF1-211ENST00000486519 PREX1Q8TCU6 1659 aa26.76■■□□□ 1.87
U2AF1-211ENST00000486519 FANCAO15360 1455 aa26.75■■□□□ 1.87
U2AF1-211ENST00000486519 DENND4BO75064 1496 aaPredicted RBP26.75■■□□□ 1.87
U2AF1-211ENST00000486519 MLECQ14165 292 aa26.75■■□□□ 1.87
U2AF1-211ENST00000486519 FHOD3Q2V2M9 1422 aa26.73■■□□□ 1.87
U2AF1-211ENST00000486519 ZMYM4Q5VZL5 1548 aa26.71■■□□□ 1.87
U2AF1-211ENST00000486519 ZFYVE16Q7Z3T8 1539 aa26.71■■□□□ 1.87
U2AF1-211ENST00000486519 RAPGEF6Q8TEU7 1601 aa26.71■■□□□ 1.87
U2AF1-211ENST00000486519 POGZQ7Z3K3 1410 aa26.7■■□□□ 1.86
U2AF1-211ENST00000486519 AKNAQ7Z591 1439 aa26.7■■□□□ 1.86
U2AF1-211ENST00000486519 CEBPAP49715 358 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-211ENST00000486519 HECW1Q76N89 1606 aa26.65■■□□□ 1.86
U2AF1-211ENST00000486519 EFCAB5A4FU69 1503 aa26.65■■□□□ 1.86
U2AF1-211ENST00000486519 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.85
U2AF1-211ENST00000486519 NUP153P49790 1475 aaKnown RBP26.62■■□□□ 1.85
U2AF1-211ENST00000486519 LTBP4Q8N2S1 1624 aa26.61■■□□□ 1.85
U2AF1-211ENST00000486519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.6■■□□□ 1.85
U2AF1-211ENST00000486519 HNRNPUL2Q1KMD3 747 aaKnown RBP26.6■■□□□ 1.85
U2AF1-211ENST00000486519 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms