RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 JPH4Q96JJ6 628 aa34.79■■■■□ 3.16
CHRD-216ENST00000486066 ABCC10Q5T3U5 1492 aa34.72■■■■□ 3.15
CHRD-216ENST00000486066 MAPKBP1O60336 1514 aa34.72■■■■□ 3.15
CHRD-216ENST00000486066 ADCY10Q96PN6 1610 aa34.66■■■■□ 3.14
CHRD-216ENST00000486066 DIP2BQ9P265 1576 aa34.66■■■■□ 3.14
CHRD-216ENST00000486066 KIAA0586Q9BVV6 1533 aa34.55■■■■□ 3.12
CHRD-216ENST00000486066 FAM69CQ0P6D2 419 aa34.55■■■■□ 3.12
CHRD-216ENST00000486066 IGF1RP08069 1367 aa34.49■■■■□ 3.11
CHRD-216ENST00000486066 CUL7Q14999 1698 aa34.47■■■■□ 3.11
CHRD-216ENST00000486066 NPM1P06748 294 aaKnown RBP eCLIP34.44■■■■□ 3.1
CHRD-216ENST00000486066 KDM6BO15054 1643 aa34.39■■■■□ 3.1
CHRD-216ENST00000486066 KIF27Q86VH2 1401 aa34.38■■■■□ 3.09
CHRD-216ENST00000486066 TSPOAP1O95153 1857 aa34.32■■■■□ 3.08
CHRD-216ENST00000486066 KDM4FA0A1W2PPD8 638 aa34.29■■■■□ 3.08
CHRD-216ENST00000486066 PTPRGP23470 1445 aa34.24■■■■□ 3.07
CHRD-216ENST00000486066 ABCC2Q92887 1545 aa34.22■■■■□ 3.07
CHRD-216ENST00000486066 PPRC1Q5VV67 1664 aaKnown RBP34.22■■■■□ 3.07
CHRD-216ENST00000486066 CARMIL1Q5VZK9 1371 aa34.19■■■■□ 3.06
CHRD-216ENST00000486066 GLI2P10070 1586 aa34.19■■■■□ 3.06
CHRD-216ENST00000486066 TNIKQ9UKE5 1360 aa34.17■■■■□ 3.06
CHRD-216ENST00000486066 UHRF1BP1LA0JNW5 1464 aa34.14■■■■□ 3.06
CHRD-216ENST00000486066 IQGAP2Q13576 1575 aa34.14■■■■□ 3.06
CHRD-216ENST00000486066 CARMIL2Q6F5E8 1435 aa34.12■■■■□ 3.05
CHRD-216ENST00000486066 ASXL2Q76L83 1435 aa34.12■■■■□ 3.05
CHRD-216ENST00000486066 PLB1Q6P1J6 1458 aa34.1■■■■□ 3.05
CHRD-216ENST00000486066 DISP1Q96F81 1524 aa34.09■■■■□ 3.05
CHRD-216ENST00000486066 UACAQ9BZF9 1416 aa34.01■■■■□ 3.03
CHRD-216ENST00000486066 KDM5BQ9UGL1 1544 aa34■■■■□ 3.03
CHRD-216ENST00000486066 MAP3K4Q9Y6R4 1608 aa33.98■■■■□ 3.03
CHRD-216ENST00000486066 COL17A1Q9UMD9 1497 aaPredicted RBP33.97■■■■□ 3.03
CHRD-216ENST00000486066 UGGT2Q9NYU1 1516 aa33.96■■■■□ 3.03
CHRD-216ENST00000486066 EPRSP07814 1512 aaKnown RBP33.94■■■■□ 3.02
CHRD-216ENST00000486066 TTBK1Q5TCY1 1321 aaPredicted RBP33.92■■■■□ 3.02
CHRD-216ENST00000486066 ZCCHC11Q5TAX3 1644 aaKnown RBP33.9■■■■□ 3.02
CHRD-216ENST00000486066 ADGRL1O94910 1474 aa33.88■■■■□ 3.01
CHRD-216ENST00000486066 KIAA0556O60303 1618 aa33.87■■■■□ 3.01
CHRD-216ENST00000486066 RAPGEF2Q9Y4G8 1499 aa33.84■■■■□ 3.01
CHRD-216ENST00000486066 TEX14Q8IWB6 1497 aa33.79■■■■□ 3
CHRD-216ENST00000486066 WDR7Q9Y4E6 1490 aa33.71■■■□□ 2.99
CHRD-216ENST00000486066 ILDR1Q86SU0 546 aaPredicted RBP33.67■■■□□ 2.98
CHRD-216ENST00000486066 CTTNBP2Q8WZ74 1663 aa33.66■■■□□ 2.98
CHRD-216ENST00000486066 ABCA8O94911 1581 aa33.63■■■□□ 2.97
CHRD-216ENST00000486066 MAGI3Q5TCQ9 1506 aa33.62■■■□□ 2.97
CHRD-216ENST00000486066 CFAP43Q8NDM7 1665 aa33.61■■■□□ 2.97
CHRD-216ENST00000486066 HECW2Q9P2P5 1572 aa33.6■■■□□ 2.97
CHRD-216ENST00000486066 GOLGA3Q08378 1498 aa33.52■■■□□ 2.96
CHRD-216ENST00000486066 CD109Q6YHK3 1445 aa33.51■■■□□ 2.95
CHRD-216ENST00000486066 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
CHRD-216ENST00000486066 ARAP3Q8WWN8 1544 aa33.38■■■□□ 2.93
CHRD-216ENST00000486066 KIF21BO75037 1637 aa33.36■■■□□ 2.93
CHRD-216ENST00000486066 KCNH8Q96L42 1107 aa33.33■■■□□ 2.93
CHRD-216ENST00000486066 ATP10BO94823 1461 aa33.29■■■□□ 2.92
CHRD-216ENST00000486066 ABCA9Q8IUA7 1624 aa33.28■■■□□ 2.92
CHRD-216ENST00000486066 SAMD9Q5K651 1589 aa33.21■■■□□ 2.91
CHRD-216ENST00000486066 ADAMTSL3P82987 1691 aa33.2■■■□□ 2.91
CHRD-216ENST00000486066 PHLDB1Q86UU1 1377 aa33.18■■■□□ 2.9
CHRD-216ENST00000486066 FRMPD1Q5SYB0 1578 aa33.13■■■□□ 2.89
CHRD-216ENST00000486066 NEO1Q92859 1461 aa33.12■■■□□ 2.89
CHRD-216ENST00000486066 RAPGEF6Q8TEU7 1601 aa33.1■■■□□ 2.89
CHRD-216ENST00000486066 PTPRMP28827 1452 aa33.1■■■□□ 2.89
CHRD-216ENST00000486066 ARID3CA6NKF2 412 aa33.06■■■□□ 2.88
CHRD-216ENST00000486066 BCORL1Q5H9F3 1711 aa33.05■■■□□ 2.88
CHRD-216ENST00000486066 P3H3Q8IVL6 736 aa33.04■■■□□ 2.88
CHRD-216ENST00000486066 NUP153P49790 1475 aaKnown RBP33.01■■■□□ 2.88
CHRD-216ENST00000486066 RAPGEF3O95398 923 aa33.01■■■□□ 2.87
CHRD-216ENST00000486066 MADDQ8WXG6 1647 aa32.96■■■□□ 2.87
CHRD-216ENST00000486066 FAM9AQ8IZU1 332 aaPredicted RBP32.93■■■□□ 2.86
CHRD-216ENST00000486066 RICTORQ6R327 1708 aa32.93■■■□□ 2.86
CHRD-216ENST00000486066 ARHGEF40Q8TER5 1519 aa32.92■■■□□ 2.86
CHRD-216ENST00000486066 FBXO41Q8TF61 875 aa32.91■■■□□ 2.86
CHRD-216ENST00000486066 PCF11O94913 1555 aaKnown RBP32.91■■■□□ 2.86
CHRD-216ENST00000486066 CSRNP3Q8WYN3 585 aa32.9■■■□□ 2.86
CHRD-216ENST00000486066 LMTK3Q96Q04 1460 aa32.89■■■□□ 2.86
CHRD-216ENST00000486066 FHOD3Q2V2M9 1422 aa32.84■■■□□ 2.85
CHRD-216ENST00000486066 ZMYM4Q5VZL5 1548 aa32.81■■■□□ 2.84
CHRD-216ENST00000486066 DENND4BO75064 1496 aaPredicted RBP32.8■■■□□ 2.84
CHRD-216ENST00000486066 SIGLEC1Q9BZZ2 1709 aa32.8■■■□□ 2.84
CHRD-216ENST00000486066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.8■■■□□ 2.84
CHRD-216ENST00000486066 RIMS1Q86UR5 1692 aaKnown RBP32.79■■■□□ 2.84
CHRD-216ENST00000486066 CFAP74Q9C0B2 1584 aa32.79■■■□□ 2.84
CHRD-216ENST00000486066 AKNAQ7Z591 1439 aa32.78■■■□□ 2.84
CHRD-216ENST00000486066 TTC37Q6PGP7 1564 aa32.76■■■□□ 2.84
CHRD-216ENST00000486066 FANCAO15360 1455 aa32.75■■■□□ 2.83
CHRD-216ENST00000486066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.74■■■□□ 2.83
CHRD-216ENST00000486066 HNRNPUL2Q1KMD3 747 aaKnown RBP32.74■■■□□ 2.83
CHRD-216ENST00000486066 EEA1Q15075 1411 aa32.74■■■□□ 2.83
CHRD-216ENST00000486066 ARID4BQ4LE39 1312 aaPredicted RBP32.71■■■□□ 2.83
CHRD-216ENST00000486066 EFCAB5A4FU69 1503 aa32.7■■■□□ 2.83
CHRD-216ENST00000486066 PLEKHD1A6NEE1 506 aa32.69■■■□□ 2.82
CHRD-216ENST00000486066 YEATS2Q9ULM3 1422 aa32.66■■■□□ 2.82
CHRD-216ENST00000486066 MAGI2Q86UL8 1455 aa32.66■■■□□ 2.82
CHRD-216ENST00000486066 ZFYVE16Q7Z3T8 1539 aa32.66■■■□□ 2.82
CHRD-216ENST00000486066 HECW1Q76N89 1606 aa32.62■■■□□ 2.81
CHRD-216ENST00000486066 POGZQ7Z3K3 1410 aa32.6■■■□□ 2.81
CHRD-216ENST00000486066 CDK13Q14004 1512 aaKnown RBP32.59■■■□□ 2.81
CHRD-216ENST00000486066 FER1L4A9Z1Z3 1794 aa32.55■■■□□ 2.8
CHRD-216ENST00000486066 PLCH2O75038 1416 aa32.55■■■□□ 2.8
CHRD-216ENST00000486066 RANGAP1P46060 587 aaPredicted RBP32.55■■■□□ 2.8
CHRD-216ENST00000486066 HSPA2P54652 639 aa32.52■■■□□ 2.8
CHRD-216ENST00000486066 ARHGEF12Q9NZN5 1544 aa32.51■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms