RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
SND1-213ENST00000486037 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
SND1-213ENST00000486037 TSPOAP1O95153 1857 aa18.17■□□□□ 0.5
SND1-213ENST00000486037 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
SND1-213ENST00000486037 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
SND1-213ENST00000486037 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.499e-6■■■■■ 50.1
SND1-213ENST00000486037 NPM1P06748 294 aaKnown RBP eCLIP18.1■□□□□ 0.49
SND1-213ENST00000486037 ADGRL1O94910 1474 aa18.09■□□□□ 0.49
SND1-213ENST00000486037 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
SND1-213ENST00000486037 HECW2Q9P2P5 1572 aa18.07■□□□□ 0.48
SND1-213ENST00000486037 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
SND1-213ENST00000486037 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
SND1-213ENST00000486037 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
SND1-213ENST00000486037 TOP2BQ02880 1626 aa17.99■□□□□ 0.47
SND1-213ENST00000486037 COL17A1Q9UMD9 1497 aaPredicted RBP17.96■□□□□ 0.47
SND1-213ENST00000486037 ASXL2Q76L83 1435 aa17.87■□□□□ 0.45
SND1-213ENST00000486037 GLI2P10070 1586 aa17.87■□□□□ 0.45
SND1-213ENST00000486037 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
SND1-213ENST00000486037 KIAA0586Q9BVV6 1533 aa17.86■□□□□ 0.45
SND1-213ENST00000486037 FBXO41Q8TF61 875 aa17.85■□□□□ 0.45
SND1-213ENST00000486037 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
SND1-213ENST00000486037 PTPRGP23470 1445 aa17.83■□□□□ 0.45
SND1-213ENST00000486037 PLB1Q6P1J6 1458 aa17.81■□□□□ 0.44
SND1-213ENST00000486037 CUL7Q14999 1698 aa17.8■□□□□ 0.44
SND1-213ENST00000486037 MAP3K4Q9Y6R4 1608 aa17.77■□□□□ 0.44
SND1-213ENST00000486037 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.43
SND1-213ENST00000486037 IGF1RP08069 1367 aa17.74■□□□□ 0.43
SND1-213ENST00000486037 TNIKQ9UKE5 1360 aa17.74■□□□□ 0.43
SND1-213ENST00000486037 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
SND1-213ENST00000486037 TEX14Q8IWB6 1497 aa17.69■□□□□ 0.42
SND1-213ENST00000486037 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
SND1-213ENST00000486037 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
SND1-213ENST00000486037 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
SND1-213ENST00000486037 CARMIL2Q6F5E8 1435 aa17.65■□□□□ 0.42
SND1-213ENST00000486037 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
SND1-213ENST00000486037 DISP1Q96F81 1524 aa17.63■□□□□ 0.41
SND1-213ENST00000486037 KIF21BO75037 1637 aa17.63■□□□□ 0.41
SND1-213ENST00000486037 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
SND1-213ENST00000486037 IQGAP2Q13576 1575 aa17.59■□□□□ 0.41
SND1-213ENST00000486037 KIF27Q86VH2 1401 aa17.58■□□□□ 0.41
SND1-213ENST00000486037 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
SND1-213ENST00000486037 WDR7Q9Y4E6 1490 aa17.56■□□□□ 0.4
SND1-213ENST00000486037 PTPRMP28827 1452 aa17.54■□□□□ 0.4
SND1-213ENST00000486037 MAGI3Q5TCQ9 1506 aa17.53■□□□□ 0.4
SND1-213ENST00000486037 CD109Q6YHK3 1445 aa17.53■□□□□ 0.4
SND1-213ENST00000486037 ILDR2Q71H61 639 aa17.52■□□□□ 0.4
SND1-213ENST00000486037 ADAMTSL3P82987 1691 aa17.51■□□□□ 0.39
SND1-213ENST00000486037 CFAP43Q8NDM7 1665 aa17.48■□□□□ 0.39
SND1-213ENST00000486037 KIAA0556O60303 1618 aa17.48■□□□□ 0.39
SND1-213ENST00000486037 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
SND1-213ENST00000486037 KCNH8Q96L42 1107 aa17.47■□□□□ 0.39
SND1-213ENST00000486037 PCF11O94913 1555 aaKnown RBP17.47■□□□□ 0.39
SND1-213ENST00000486037 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
SND1-213ENST00000486037 MADDQ8WXG6 1647 aa17.41■□□□□ 0.38
SND1-213ENST00000486037 SOCS7O14512 581 aa17.41■□□□□ 0.38
SND1-213ENST00000486037 BCORL1Q5H9F3 1711 aa17.39■□□□□ 0.37
SND1-213ENST00000486037 HSPA2P54652 639 aa17.39■□□□□ 0.37
SND1-213ENST00000486037 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
SND1-213ENST00000486037 ABCA8O94911 1581 aa17.37■□□□□ 0.37
SND1-213ENST00000486037 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
SND1-213ENST00000486037 CERKQ8TCT0 537 aa17.36■□□□□ 0.37
SND1-213ENST00000486037 FRMPD1Q5SYB0 1578 aa17.32■□□□□ 0.36
SND1-213ENST00000486037 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
SND1-213ENST00000486037 RAPGEF2Q9Y4G8 1499 aa17.31■□□□□ 0.36
SND1-213ENST00000486037 ARID3CA6NKF2 412 aa17.3■□□□□ 0.36
SND1-213ENST00000486037 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
SND1-213ENST00000486037 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
SND1-213ENST00000486037 ABCA9Q8IUA7 1624 aa17.25■□□□□ 0.35
SND1-213ENST00000486037 ATP10BO94823 1461 aa17.23■□□□□ 0.35
SND1-213ENST00000486037 SIGLEC1Q9BZZ2 1709 aa17.22■□□□□ 0.35
SND1-213ENST00000486037 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.35
SND1-213ENST00000486037 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
SND1-213ENST00000486037 SPATA31D1Q6ZQQ2 1576 aa17.21■□□□□ 0.35
SND1-213ENST00000486037 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
SND1-213ENST00000486037 NEO1Q92859 1461 aa17.2■□□□□ 0.34
SND1-213ENST00000486037 GOLGA3Q08378 1498 aa17.19■□□□□ 0.34
SND1-213ENST00000486037 RICTORQ6R327 1708 aa17.14■□□□□ 0.33
SND1-213ENST00000486037 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
SND1-213ENST00000486037 YEATS2Q9ULM3 1422 aa17.11■□□□□ 0.33
SND1-213ENST00000486037 MLECQ14165 292 aa17.1■□□□□ 0.33
SND1-213ENST00000486037 DENND4BO75064 1496 aaPredicted RBP17.1■□□□□ 0.33
SND1-213ENST00000486037 STRCQ7RTU9 1775 aa17.1■□□□□ 0.33
SND1-213ENST00000486037 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.33
SND1-213ENST00000486037 TTC37Q6PGP7 1564 aa17.08■□□□□ 0.32
SND1-213ENST00000486037 FANCAO15360 1455 aa17.08■□□□□ 0.32
SND1-213ENST00000486037 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
SND1-213ENST00000486037 AKNAQ7Z591 1439 aa17.06■□□□□ 0.32
SND1-213ENST00000486037 POGZQ7Z3K3 1410 aa17.05■□□□□ 0.32
SND1-213ENST00000486037 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
SND1-213ENST00000486037 ZFYVE16Q7Z3T8 1539 aa17.05■□□□□ 0.32
SND1-213ENST00000486037 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
SND1-213ENST00000486037 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
SND1-213ENST00000486037 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
SND1-213ENST00000486037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
SND1-213ENST00000486037 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
SND1-213ENST00000486037 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
SND1-213ENST00000486037 NUP153P49790 1475 aaKnown RBP17■□□□□ 0.31
SND1-213ENST00000486037 PRXQ9BXM0 1461 aa17■□□□□ 0.31
SND1-213ENST00000486037 HECW1Q76N89 1606 aa17■□□□□ 0.31
SND1-213ENST00000486037 EFCAB5A4FU69 1503 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms