RNA–Protein interactions for RNA: ENST00000485972.5

CDK5-204, Transcript of cyclin dependent kinase 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-204ENST00000485972 PCGF6Q9BYE7 350 aa33.98■■■■□ 3.03
CDK5-204ENST00000485972 TRIM26Q12899 539 aaPredicted RBP33.98■■■■□ 3.03
CDK5-204ENST00000485972 CTTNBP2Q8WZ74 1663 aa33.96■■■■□ 3.03
CDK5-204ENST00000485972 MAGI1Q96QZ7 1491 aaPredicted RBP33.96■■■■□ 3.03
CDK5-204ENST00000485972 CHMP7Q8WUX9 453 aaPredicted RBP33.85■■■■□ 3.01
CDK5-204ENST00000485972 SYNJ2O15056 1496 aa33.84■■■■□ 3.01
CDK5-204ENST00000485972 GRIN2AQ12879 1464 aa33.83■■■■□ 3.01
CDK5-204ENST00000485972 APLP2Q06481 763 aa33.83■■■■□ 3.01
CDK5-204ENST00000485972 P3H3Q8IVL6 736 aa33.82■■■■□ 3
CDK5-204ENST00000485972 EFCAB5A4FU69 1503 aa33.82■■■■□ 3
CDK5-204ENST00000485972 FBLN2P98095 1184 aa33.78■■■■□ 3
CDK5-204ENST00000485972 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
CDK5-204ENST00000485972 FHOD3Q2V2M9 1422 aa33.72■■■□□ 2.99
CDK5-204ENST00000485972 IQGAP2Q13576 1575 aa33.72■■■□□ 2.99
CDK5-204ENST00000485972 KIAA0586Q9BVV6 1533 aa33.7■■■□□ 2.98
CDK5-204ENST00000485972 SAMD9Q5K651 1589 aa33.67■■■□□ 2.98
CDK5-204ENST00000485972 NUP160Q12769 1436 aa33.59■■■□□ 2.97
CDK5-204ENST00000485972 CEP170Q5SW79 1584 aa33.59■■■□□ 2.97
CDK5-204ENST00000485972 FMN1Q68DA7 1419 aa33.57■■■□□ 2.97
CDK5-204ENST00000485972 UGGT2Q9NYU1 1516 aa33.57■■■□□ 2.96
CDK5-204ENST00000485972 CASKIN1Q8WXD9 1431 aa33.5■■■□□ 2.95
CDK5-204ENST00000485972 PCF11O94913 1555 aaKnown RBP33.49■■■□□ 2.95
CDK5-204ENST00000485972 KANK4Q5T7N3 995 aaPredicted RBP33.49■■■□□ 2.95
CDK5-204ENST00000485972 ATP1B4Q9UN42 357 aaPredicted RBP33.49■■■□□ 2.95
CDK5-204ENST00000485972 FYCO1Q9BQS8 1478 aa33.47■■■□□ 2.95
CDK5-204ENST00000485972 MAP3K1Q13233 1512 aa33.44■■■□□ 2.94
CDK5-204ENST00000485972 DISP1Q96F81 1524 aa33.42■■■□□ 2.94
CDK5-204ENST00000485972 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
CDK5-204ENST00000485972 TIAM1Q13009 1591 aa33.39■■■□□ 2.94
CDK5-204ENST00000485972 KIAA0556O60303 1618 aa33.37■■■□□ 2.93
CDK5-204ENST00000485972 CHD1O14646 1710 aa33.37■■■□□ 2.93
CDK5-204ENST00000485972 CARMIL2Q6F5E8 1435 aa33.3■■■□□ 2.92
CDK5-204ENST00000485972 LRRC9Q6ZRR7 1453 aa33.28■■■□□ 2.92
CDK5-204ENST00000485972 CFAP43Q8NDM7 1665 aa33.25■■■□□ 2.91
CDK5-204ENST00000485972 PRG4Q92954 1404 aaPredicted RBP33.16■■■□□ 2.9
CDK5-204ENST00000485972 HECW1Q76N89 1606 aa33.16■■■□□ 2.9
CDK5-204ENST00000485972 CCDC18Q5T9S5 1454 aa33.13■■■□□ 2.89
CDK5-204ENST00000485972 LRRIQ1Q96JM4 1722 aa33.1■■■□□ 2.89
CDK5-204ENST00000485972 MTUS2Q5JR59 1369 aa33.09■■■□□ 2.89
CDK5-204ENST00000485972 EPRSP07814 1512 aaKnown RBP33.08■■■□□ 2.89
CDK5-204ENST00000485972 SHROOM2Q13796 1616 aa33.06■■■□□ 2.88
CDK5-204ENST00000485972 RAPGEF6Q8TEU7 1601 aa33.04■■■□□ 2.88
CDK5-204ENST00000485972 CLASP1Q7Z460 1538 aa33.04■■■□□ 2.88
CDK5-204ENST00000485972 RRBP1Q9P2E9 1410 aaKnown RBP33.04■■■□□ 2.88
CDK5-204ENST00000485972 ARID3CA6NKF2 412 aa33.02■■■□□ 2.88
CDK5-204ENST00000485972 PLB1Q6P1J6 1458 aa33.01■■■□□ 2.88
CDK5-204ENST00000485972 NUP153P49790 1475 aaKnown RBP33.01■■■□□ 2.87
CDK5-204ENST00000485972 PHLDB1Q86UU1 1377 aa33■■■□□ 2.87
CDK5-204ENST00000485972 CDK13Q14004 1512 aaKnown RBP32.99■■■□□ 2.87
CDK5-204ENST00000485972 CCNB3Q8WWL7 1395 aa32.98■■■□□ 2.87
CDK5-204ENST00000485972 PTPRGP23470 1445 aa32.98■■■□□ 2.87
CDK5-204ENST00000485972 HNRNPUL2Q1KMD3 747 aaKnown RBP32.98■■■□□ 2.87
CDK5-204ENST00000485972 HRCP23327 699 aa32.96■■■□□ 2.87
CDK5-204ENST00000485972 EHBP1L1Q8N3D4 1523 aa32.95■■■□□ 2.86
CDK5-204ENST00000485972 MAGI3Q5TCQ9 1506 aa32.92■■■□□ 2.86
CDK5-204ENST00000485972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.91■■■□□ 2.86
CDK5-204ENST00000485972 ABCA8O94911 1581 aa32.89■■■□□ 2.86
CDK5-204ENST00000485972 ERCC6L2Q5T890 1561 aa32.88■■■□□ 2.85
CDK5-204ENST00000485972 CDK11AQ9UQ88 783 aaPredicted RBP32.88■■■□□ 2.85
CDK5-204ENST00000485972 NCOA2Q15596 1464 aa32.86■■■□□ 2.85
CDK5-204ENST00000485972 OSCARQ8IYS5 282 aa32.86■■■□□ 2.85
CDK5-204ENST00000485972 SUPT6HQ7KZ85 1726 aaKnown RBP32.84■■■□□ 2.85
CDK5-204ENST00000485972 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
CDK5-204ENST00000485972 UACAQ9BZF9 1416 aa32.77■■■□□ 2.84
CDK5-204ENST00000485972 FAM50AQ14320 339 aaKnown RBP32.77■■■□□ 2.84
CDK5-204ENST00000485972 FGD6Q6ZV73 1430 aa32.75■■■□□ 2.83
CDK5-204ENST00000485972 MYOM3Q5VTT5 1437 aa32.75■■■□□ 2.83
CDK5-204ENST00000485972 ATP10BO94823 1461 aa32.74■■■□□ 2.83
CDK5-204ENST00000485972 ITGAEP38570 1179 aa32.73■■■□□ 2.83
CDK5-204ENST00000485972 TROQ12816 1431 aaPredicted RBP32.71■■■□□ 2.83
CDK5-204ENST00000485972 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.7■■■□□ 2.83
CDK5-204ENST00000485972 PLEKHD1A6NEE1 506 aa32.68■■■□□ 2.82
CDK5-204ENST00000485972 CCER1Q8TC90 406 aaPredicted RBP32.65■■■□□ 2.82
CDK5-204ENST00000485972 ABCC2Q92887 1545 aa32.62■■■□□ 2.81
CDK5-204ENST00000485972 ZEB1P37275 1124 aaPredicted RBP32.6■■■□□ 2.81
CDK5-204ENST00000485972 MIA2Q96PC5 1412 aa32.57■■■□□ 2.8
CDK5-204ENST00000485972 UHRF1BP1LA0JNW5 1464 aa32.55■■■□□ 2.8
CDK5-204ENST00000485972 PTPN23Q9H3S7 1636 aa32.53■■■□□ 2.8
CDK5-204ENST00000485972 ADCY10Q96PN6 1610 aa32.51■■■□□ 2.79
CDK5-204ENST00000485972 TCOF1Q13428 1488 aaKnown RBP32.5■■■□□ 2.79
CDK5-204ENST00000485972 KIF14Q15058 1648 aa32.49■■■□□ 2.79
CDK5-204ENST00000485972 KDM5BQ9UGL1 1544 aa32.42■■■□□ 2.78
CDK5-204ENST00000485972 GPATCH8Q9UKJ3 1502 aaKnown RBP32.42■■■□□ 2.78
CDK5-204ENST00000485972 CFDP1Q9UEE9 299 aaPredicted RBP32.41■■■□□ 2.78
CDK5-204ENST00000485972 ABCC10Q5T3U5 1492 aa32.39■■■□□ 2.78
CDK5-204ENST00000485972 SETD5Q9C0A6 1442 aa32.39■■■□□ 2.78
CDK5-204ENST00000485972 PTPRKQ15262 1439 aa32.39■■■□□ 2.77
CDK5-204ENST00000485972 ZCCHC11Q5TAX3 1644 aaKnown RBP32.36■■■□□ 2.77
CDK5-204ENST00000485972 RAB3GAP2Q9H2M9 1393 aa32.35■■■□□ 2.77
CDK5-204ENST00000485972 ZNF644Q9H582 1327 aaPredicted RBP32.35■■■□□ 2.77
CDK5-204ENST00000485972 ITSN2Q9NZM3 1697 aa32.34■■■□□ 2.77
CDK5-204ENST00000485972 ZNF777Q9ULD5 760 aaPredicted RBP32.29■■■□□ 2.76
CDK5-204ENST00000485972 KCNH8Q96L42 1107 aa32.28■■■□□ 2.76
CDK5-204ENST00000485972 CAMSAP2Q08AD1 1489 aa32.26■■■□□ 2.75
CDK5-204ENST00000485972 DHX57Q6P158 1386 aaKnown RBP32.24■■■□□ 2.75
CDK5-204ENST00000485972 HFM1A2PYH4 1435 aa32.24■■■□□ 2.75
CDK5-204ENST00000485972 CHIC2Q9UKJ5 165 aa32.24■■■□□ 2.75
CDK5-204ENST00000485972 CDC42BPAQ5VT25 1732 aa32.23■■■□□ 2.75
CDK5-204ENST00000485972 DAPK1P53355 1430 aa32.22■■■□□ 2.75
CDK5-204ENST00000485972 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms