RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 KIF27Q86VH2 1401 aa20.59■□□□□ 0.89
TRA2B-213ENST00000485530 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
TRA2B-213ENST00000485530 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
TRA2B-213ENST00000485530 ABCC10Q5T3U5 1492 aa20.54■□□□□ 0.88
TRA2B-213ENST00000485530 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
TRA2B-213ENST00000485530 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
TRA2B-213ENST00000485530 FAM69CQ0P6D2 419 aa20.47■□□□□ 0.87
TRA2B-213ENST00000485530 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
TRA2B-213ENST00000485530 JPH4Q96JJ6 628 aa20.45■□□□□ 0.86
TRA2B-213ENST00000485530 ADCY10Q96PN6 1610 aa20.45■□□□□ 0.86
TRA2B-213ENST00000485530 KDM6BO15054 1643 aa20.44■□□□□ 0.86
TRA2B-213ENST00000485530 KDM4FA0A1W2PPD8 638 aa20.43■□□□□ 0.86
TRA2B-213ENST00000485530 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
TRA2B-213ENST00000485530 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
TRA2B-213ENST00000485530 NPM1P06748 294 aaKnown RBP eCLIP20.37■□□□□ 0.85
TRA2B-213ENST00000485530 EEA1Q15075 1411 aa20.33■□□□□ 0.84
TRA2B-213ENST00000485530 TSPOAP1O95153 1857 aa20.33■□□□□ 0.84
TRA2B-213ENST00000485530 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
TRA2B-213ENST00000485530 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
TRA2B-213ENST00000485530 CUL7Q14999 1698 aa20.29■□□□□ 0.84
TRA2B-213ENST00000485530 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
TRA2B-213ENST00000485530 KIAA0586Q9BVV6 1533 aa20.26■□□□□ 0.83
TRA2B-213ENST00000485530 PPRC1Q5VV67 1664 aaKnown RBP20.2■□□□□ 0.82
TRA2B-213ENST00000485530 EHMT2Q96KQ7 1210 aa20.19■□□□□ 0.82
TRA2B-213ENST00000485530 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
TRA2B-213ENST00000485530 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
TRA2B-213ENST00000485530 GLI2P10070 1586 aa20.15■□□□□ 0.82
TRA2B-213ENST00000485530 PTPRGP23470 1445 aa20.14■□□□□ 0.81
TRA2B-213ENST00000485530 ASXL2Q76L83 1435 aa20.13■□□□□ 0.81
TRA2B-213ENST00000485530 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
TRA2B-213ENST00000485530 KIF21BO75037 1637 aa20.09■□□□□ 0.81
TRA2B-213ENST00000485530 HECW2Q9P2P5 1572 aa20.09■□□□□ 0.81
TRA2B-213ENST00000485530 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.8
TRA2B-213ENST00000485530 COL17A1Q9UMD9 1497 aaPredicted RBP20.07■□□□□ 0.8
TRA2B-213ENST00000485530 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
TRA2B-213ENST00000485530 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
TRA2B-213ENST00000485530 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
TRA2B-213ENST00000485530 TTBK1Q5TCY1 1321 aaPredicted RBP20.04■□□□□ 0.8
TRA2B-213ENST00000485530 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
TRA2B-213ENST00000485530 MAP3K4Q9Y6R4 1608 aa20.04■□□□□ 0.8
TRA2B-213ENST00000485530 GOLGA3Q08378 1498 aa20.03■□□□□ 0.8
TRA2B-213ENST00000485530 IQGAP2Q13576 1575 aa20.02■□□□□ 0.8
TRA2B-213ENST00000485530 EPRSP07814 1512 aaKnown RBP20.02■□□□□ 0.79
TRA2B-213ENST00000485530 UACAQ9BZF9 1416 aa19.99■□□□□ 0.79
TRA2B-213ENST00000485530 TEX14Q8IWB6 1497 aa19.98■□□□□ 0.79
TRA2B-213ENST00000485530 DISP1Q96F81 1524 aa19.97■□□□□ 0.79
TRA2B-213ENST00000485530 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
TRA2B-213ENST00000485530 RANGAP1P46060 587 aaPredicted RBP19.96■□□□□ 0.79
TRA2B-213ENST00000485530 UGGT2Q9NYU1 1516 aa19.96■□□□□ 0.79
TRA2B-213ENST00000485530 ZCCHC11Q5TAX3 1644 aaKnown RBP19.94■□□□□ 0.78
TRA2B-213ENST00000485530 CTTNBP2Q8WZ74 1663 aa19.94■□□□□ 0.78
TRA2B-213ENST00000485530 P3H3Q8IVL6 736 aa19.91■□□□□ 0.78
TRA2B-213ENST00000485530 WDR7Q9Y4E6 1490 aa19.86■□□□□ 0.77
TRA2B-213ENST00000485530 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
TRA2B-213ENST00000485530 MAGI3Q5TCQ9 1506 aa19.8■□□□□ 0.76
TRA2B-213ENST00000485530 CFAP43Q8NDM7 1665 aa19.79■□□□□ 0.76
TRA2B-213ENST00000485530 SAMD9Q5K651 1589 aa19.78■□□□□ 0.76
TRA2B-213ENST00000485530 ARHGAP35Q9NRY4 1499 aa19.78■□□□□ 0.76
TRA2B-213ENST00000485530 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
TRA2B-213ENST00000485530 CD109Q6YHK3 1445 aa19.75■□□□□ 0.75
TRA2B-213ENST00000485530 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
TRA2B-213ENST00000485530 CLIP1P30622 1438 aa19.72■□□□□ 0.75
TRA2B-213ENST00000485530 ABCA8O94911 1581 aa19.7■□□□□ 0.74
TRA2B-213ENST00000485530 CEP162Q5TB80 1403 aa19.7■□□□□ 0.74
TRA2B-213ENST00000485530 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
TRA2B-213ENST00000485530 ARAP3Q8WWN8 1544 aa19.66■□□□□ 0.74
TRA2B-213ENST00000485530 KCNH8Q96L42 1107 aa19.64■□□□□ 0.73
TRA2B-213ENST00000485530 PTPRMP28827 1452 aa19.64■□□□□ 0.73
TRA2B-213ENST00000485530 ADAMTSL3P82987 1691 aa19.64■□□□□ 0.73
TRA2B-213ENST00000485530 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
TRA2B-213ENST00000485530 FMN1Q68DA7 1419 aa19.57■□□□□ 0.72
TRA2B-213ENST00000485530 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
TRA2B-213ENST00000485530 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
TRA2B-213ENST00000485530 ATP10BO94823 1461 aa19.54■□□□□ 0.72
TRA2B-213ENST00000485530 NUP153P49790 1475 aaKnown RBP19.54■□□□□ 0.72
TRA2B-213ENST00000485530 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
TRA2B-213ENST00000485530 MADDQ8WXG6 1647 aa19.54■□□□□ 0.72
TRA2B-213ENST00000485530 LMTK3Q96Q04 1460 aa19.54■□□□□ 0.72
TRA2B-213ENST00000485530 ATP1B4Q9UN42 357 aaPredicted RBP19.53■□□□□ 0.72
TRA2B-213ENST00000485530 FRMPD1Q5SYB0 1578 aa19.53■□□□□ 0.72
TRA2B-213ENST00000485530 RAPGEF6Q8TEU7 1601 aa19.52■□□□□ 0.72
TRA2B-213ENST00000485530 PHLDB1Q86UU1 1377 aa19.51■□□□□ 0.71
TRA2B-213ENST00000485530 CASKIN1Q8WXD9 1431 aa19.5■□□□□ 0.71
TRA2B-213ENST00000485530 NEO1Q92859 1461 aa19.48■□□□□ 0.71
TRA2B-213ENST00000485530 RAPGEF3O95398 923 aa19.47■□□□□ 0.71
TRA2B-213ENST00000485530 ARHGEF40Q8TER5 1519 aa19.45■□□□□ 0.7
TRA2B-213ENST00000485530 RIMS1Q86UR5 1692 aaKnown RBP19.44■□□□□ 0.7
TRA2B-213ENST00000485530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
TRA2B-213ENST00000485530 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
TRA2B-213ENST00000485530 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
TRA2B-213ENST00000485530 CDK13Q14004 1512 aaKnown RBP19.42■□□□□ 0.7
TRA2B-213ENST00000485530 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
TRA2B-213ENST00000485530 FYCO1Q9BQS8 1478 aa19.4■□□□□ 0.7
TRA2B-213ENST00000485530 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.69
TRA2B-213ENST00000485530 HECW1Q76N89 1606 aa19.38■□□□□ 0.69
TRA2B-213ENST00000485530 RICTORQ6R327 1708 aa19.37■□□□□ 0.69
TRA2B-213ENST00000485530 PLEKHD1A6NEE1 506 aa19.37■□□□□ 0.69
TRA2B-213ENST00000485530 HSPA2P54652 639 aa19.34■□□□□ 0.69
TRA2B-213ENST00000485530 SIGLEC1Q9BZZ2 1709 aa19.32■□□□□ 0.68
TRA2B-213ENST00000485530 DENND4BO75064 1496 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms