RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 SOCS7O14512 581 aa12□□□□□ -0.49
CAPN13-206ENST00000485248 CCDC88BA6NC98 1476 aa11.99□□□□□ -0.49
CAPN13-206ENST00000485248 FGD5Q6ZNL6 1462 aa11.98□□□□□ -0.49
CAPN13-206ENST00000485248 MAPKBP1O60336 1514 aa11.97□□□□□ -0.49
CAPN13-206ENST00000485248 GRIN2AQ12879 1464 aa11.93□□□□□ -0.5
CAPN13-206ENST00000485248 DISP3Q9P2K9 1392 aa11.92□□□□□ -0.5
CAPN13-206ENST00000485248 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
CAPN13-206ENST00000485248 KCNA4P22459 653 aa11.91□□□□□ -0.5
CAPN13-206ENST00000485248 ADRA2BP18089 450 aa11.89□□□□□ -0.51
CAPN13-206ENST00000485248 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
CAPN13-206ENST00000485248 PRG4Q92954 1404 aaPredicted RBP11.87□□□□□ -0.51
CAPN13-206ENST00000485248 NUP160Q12769 1436 aa11.86□□□□□ -0.51
CAPN13-206ENST00000485248 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
CAPN13-206ENST00000485248 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
CAPN13-206ENST00000485248 ILDR2Q71H61 639 aa11.83□□□□□ -0.52
CAPN13-206ENST00000485248 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
CAPN13-206ENST00000485248 CUX1P39880 1505 aa11.8□□□□□ -0.52
CAPN13-206ENST00000485248 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
CAPN13-206ENST00000485248 JPH4Q96JJ6 628 aa11.77□□□□□ -0.53
CAPN13-206ENST00000485248 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
CAPN13-206ENST00000485248 SPATA31D1Q6ZQQ2 1576 aa11.76□□□□□ -0.53
CAPN13-206ENST00000485248 TEX14Q8IWB6 1497 aa11.76□□□□□ -0.53
CAPN13-206ENST00000485248 PPRC1Q5VV67 1664 aaKnown RBP11.72□□□□□ -0.53
CAPN13-206ENST00000485248 GLI2P10070 1586 aa11.71□□□□□ -0.54
CAPN13-206ENST00000485248 PLB1Q6P1J6 1458 aa11.7□□□□□ -0.54
CAPN13-206ENST00000485248 RUSC2Q8N2Y8 1516 aa11.69□□□□□ -0.54
CAPN13-206ENST00000485248 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
CAPN13-206ENST00000485248 ASXL2Q76L83 1435 aa11.66□□□□□ -0.54
CAPN13-206ENST00000485248 ERICH3Q5RHP9 1530 aa11.65□□□□□ -0.54
CAPN13-206ENST00000485248 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
CAPN13-206ENST00000485248 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
CAPN13-206ENST00000485248 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
CAPN13-206ENST00000485248 PPP6R1Q9UPN7 881 aa11.64□□□□□ -0.55
CAPN13-206ENST00000485248 KIF21BO75037 1637 aa11.64□□□□□ -0.55
CAPN13-206ENST00000485248 COL17A1Q9UMD9 1497 aaPredicted RBP11.63□□□□□ -0.55
CAPN13-206ENST00000485248 MAP3K4Q9Y6R4 1608 aa11.63□□□□□ -0.55
CAPN13-206ENST00000485248 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CAPN13-206ENST00000485248 ABCC2Q92887 1545 aa11.62□□□□□ -0.55
CAPN13-206ENST00000485248 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
CAPN13-206ENST00000485248 PTPRMP28827 1452 aa11.6□□□□□ -0.55
CAPN13-206ENST00000485248 PTPRGP23470 1445 aa11.6□□□□□ -0.55
CAPN13-206ENST00000485248 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
CAPN13-206ENST00000485248 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
CAPN13-206ENST00000485248 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
CAPN13-206ENST00000485248 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.57
CAPN13-206ENST00000485248 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
CAPN13-206ENST00000485248 ARID4BQ4LE39 1312 aaPredicted RBP11.51□□□□□ -0.57
CAPN13-206ENST00000485248 HSPA2P54652 639 aa11.49□□□□□ -0.57
CAPN13-206ENST00000485248 UHRF1BP1LA0JNW5 1464 aa11.49□□□□□ -0.57
CAPN13-206ENST00000485248 UACAQ9BZF9 1416 aa11.48□□□□□ -0.57
CAPN13-206ENST00000485248 MADDQ8WXG6 1647 aa11.48□□□□□ -0.57
CAPN13-206ENST00000485248 CFAP43Q8NDM7 1665 aa11.48□□□□□ -0.57
CAPN13-206ENST00000485248 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
CAPN13-206ENST00000485248 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
CAPN13-206ENST00000485248 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
CAPN13-206ENST00000485248 CD109Q6YHK3 1445 aa11.46□□□□□ -0.57
CAPN13-206ENST00000485248 FOXD1Q16676 465 aa11.46□□□□□ -0.57
CAPN13-206ENST00000485248 BCORL1Q5H9F3 1711 aa11.46□□□□□ -0.58
CAPN13-206ENST00000485248 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.58
CAPN13-206ENST00000485248 MAGI3Q5TCQ9 1506 aa11.45□□□□□ -0.58
CAPN13-206ENST00000485248 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
CAPN13-206ENST00000485248 DMRT2Q9Y5R5 561 aa11.44□□□□□ -0.58
CAPN13-206ENST00000485248 KDM5BQ9UGL1 1544 aa11.44□□□□□ -0.58
CAPN13-206ENST00000485248 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
CAPN13-206ENST00000485248 ARAP3Q8WWN8 1544 aa11.37□□□□□ -0.59
CAPN13-206ENST00000485248 IQGAP2Q13576 1575 aa11.37□□□□□ -0.59
CAPN13-206ENST00000485248 POGZQ7Z3K3 1410 aa11.36□□□□□ -0.59
CAPN13-206ENST00000485248 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
CAPN13-206ENST00000485248 YEATS2Q9ULM3 1422 aa11.33□□□□□ -0.6
CAPN13-206ENST00000485248 PREX1Q8TCU6 1659 aa11.33□□□□□ -0.6
CAPN13-206ENST00000485248 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
CAPN13-206ENST00000485248 FANCAO15360 1455 aa11.32□□□□□ -0.6
CAPN13-206ENST00000485248 FER1L4A9Z1Z3 1794 aa11.29□□□□□ -0.6
CAPN13-206ENST00000485248 RAPGEF3O95398 923 aa11.28□□□□□ -0.6
CAPN13-206ENST00000485248 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
CAPN13-206ENST00000485248 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
CAPN13-206ENST00000485248 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.61
CAPN13-206ENST00000485248 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
CAPN13-206ENST00000485248 DISP1Q96F81 1524 aa11.26□□□□□ -0.61
CAPN13-206ENST00000485248 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
CAPN13-206ENST00000485248 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
CAPN13-206ENST00000485248 KIAA0556O60303 1618 aa11.25□□□□□ -0.61
CAPN13-206ENST00000485248 UHRF1BP1Q6BDS2 1440 aa11.25□□□□□ -0.61
CAPN13-206ENST00000485248 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
CAPN13-206ENST00000485248 MLECQ14165 292 aa11.24□□□□□ -0.61
CAPN13-206ENST00000485248 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
CAPN13-206ENST00000485248 NEO1Q92859 1461 aa11.24□□□□□ -0.61
CAPN13-206ENST00000485248 STRCQ7RTU9 1775 aa11.23□□□□□ -0.61
CAPN13-206ENST00000485248 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
CAPN13-206ENST00000485248 IGF1RP08069 1367 aa11.23□□□□□ -0.61
CAPN13-206ENST00000485248 PTPRTO14522 1441 aa11.23□□□□□ -0.61
CAPN13-206ENST00000485248 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.61
CAPN13-206ENST00000485248 FRMPD1Q5SYB0 1578 aa11.2□□□□□ -0.62
CAPN13-206ENST00000485248 ABCA9Q8IUA7 1624 aa11.2□□□□□ -0.62
CAPN13-206ENST00000485248 EFCAB5A4FU69 1503 aa11.19□□□□□ -0.62
CAPN13-206ENST00000485248 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
CAPN13-206ENST00000485248 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
CAPN13-206ENST00000485248 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
CAPN13-206ENST00000485248 ZFYVE16Q7Z3T8 1539 aa11.17□□□□□ -0.62
CAPN13-206ENST00000485248 DENND4BO75064 1496 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms