RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
NUP188-206ENST00000485158 ABCC10Q5T3U5 1492 aa24.44■■□□□ 1.5
NUP188-206ENST00000485158 MAPKBP1O60336 1514 aa24.43■■□□□ 1.5
NUP188-206ENST00000485158 KIAA0586Q9BVV6 1533 aa24.4■■□□□ 1.5
NUP188-206ENST00000485158 IGF1RP08069 1367 aa24.38■■□□□ 1.49
NUP188-206ENST00000485158 ADCY10Q96PN6 1610 aa24.36■■□□□ 1.49
NUP188-206ENST00000485158 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
NUP188-206ENST00000485158 FAM69CQ0P6D2 419 aa24.35■■□□□ 1.49
NUP188-206ENST00000485158 DIP2BQ9P265 1576 aa24.33■■□□□ 1.49
NUP188-206ENST00000485158 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
NUP188-206ENST00000485158 CUL7Q14999 1698 aa24.31■■□□□ 1.48
NUP188-206ENST00000485158 PTPRGP23470 1445 aa24.18■■□□□ 1.46
NUP188-206ENST00000485158 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
NUP188-206ENST00000485158 KDM6BO15054 1643 aa24.15■■□□□ 1.46
NUP188-206ENST00000485158 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
NUP188-206ENST00000485158 CARMIL2Q6F5E8 1435 aa24.12■■□□□ 1.45
NUP188-206ENST00000485158 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
NUP188-206ENST00000485158 UHRF1BP1LA0JNW5 1464 aa24.08■■□□□ 1.45
NUP188-206ENST00000485158 KDM4FA0A1W2PPD8 638 aa24.08■■□□□ 1.45
NUP188-206ENST00000485158 IQGAP2Q13576 1575 aa24.08■■□□□ 1.44
NUP188-206ENST00000485158 GLI2P10070 1586 aa24.06■■□□□ 1.44
NUP188-206ENST00000485158 TSPOAP1O95153 1857 aa24.06■■□□□ 1.44
NUP188-206ENST00000485158 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
NUP188-206ENST00000485158 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
NUP188-206ENST00000485158 DISP1Q96F81 1524 aa24.02■■□□□ 1.44
NUP188-206ENST00000485158 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
NUP188-206ENST00000485158 PPRC1Q5VV67 1664 aaKnown RBP23.99■■□□□ 1.43
NUP188-206ENST00000485158 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
NUP188-206ENST00000485158 KDM5BQ9UGL1 1544 aa23.96■■□□□ 1.43
NUP188-206ENST00000485158 TTBK1Q5TCY1 1321 aaPredicted RBP23.93■■□□□ 1.42
NUP188-206ENST00000485158 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
NUP188-206ENST00000485158 EPRSP07814 1512 aaKnown RBP23.91■■□□□ 1.42
NUP188-206ENST00000485158 MAP3K4Q9Y6R4 1608 aa23.88■■□□□ 1.41
NUP188-206ENST00000485158 COL17A1Q9UMD9 1497 aaPredicted RBP23.87■■□□□ 1.41
NUP188-206ENST00000485158 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
NUP188-206ENST00000485158 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
NUP188-206ENST00000485158 TEX14Q8IWB6 1497 aa23.83■■□□□ 1.41
NUP188-206ENST00000485158 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
NUP188-206ENST00000485158 WDR7Q9Y4E6 1490 aa23.77■■□□□ 1.4
NUP188-206ENST00000485158 GOLGA3Q08378 1498 aa23.71■■□□□ 1.39
NUP188-206ENST00000485158 CTTNBP2Q8WZ74 1663 aa23.7■■□□□ 1.39
NUP188-206ENST00000485158 ABCA8O94911 1581 aa23.69■■□□□ 1.38
NUP188-206ENST00000485158 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
NUP188-206ENST00000485158 PRXQ9BXM0 1461 aa23.66■■□□□ 1.38
NUP188-206ENST00000485158 CFAP43Q8NDM7 1665 aa23.64■■□□□ 1.38
NUP188-206ENST00000485158 CD109Q6YHK3 1445 aa23.64■■□□□ 1.37
NUP188-206ENST00000485158 ILDR1Q86SU0 546 aaPredicted RBP23.57■■□□□ 1.36
NUP188-206ENST00000485158 HECW2Q9P2P5 1572 aa23.55■■□□□ 1.36
NUP188-206ENST00000485158 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
NUP188-206ENST00000485158 ARAP3Q8WWN8 1544 aa23.53■■□□□ 1.36
NUP188-206ENST00000485158 ATP10BO94823 1461 aa23.49■■□□□ 1.35
NUP188-206ENST00000485158 PHLDB1Q86UU1 1377 aa23.46■■□□□ 1.35
NUP188-206ENST00000485158 ABCA9Q8IUA7 1624 aa23.44■■□□□ 1.34
NUP188-206ENST00000485158 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
NUP188-206ENST00000485158 SAMD9Q5K651 1589 aa23.42■■□□□ 1.34
NUP188-206ENST00000485158 KIF21BO75037 1637 aa23.4■■□□□ 1.34
NUP188-206ENST00000485158 NEO1Q92859 1461 aa23.36■■□□□ 1.33
NUP188-206ENST00000485158 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
NUP188-206ENST00000485158 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
NUP188-206ENST00000485158 RAPGEF6Q8TEU7 1601 aa23.33■■□□□ 1.33
NUP188-206ENST00000485158 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
NUP188-206ENST00000485158 ADAMTSL3P82987 1691 aa23.31■■□□□ 1.32
NUP188-206ENST00000485158 NUP153P49790 1475 aaKnown RBP23.3■■□□□ 1.32
NUP188-206ENST00000485158 PTPRMP28827 1452 aa23.28■■□□□ 1.32
NUP188-206ENST00000485158 RAPGEF3O95398 923 aa23.27■■□□□ 1.32
NUP188-206ENST00000485158 FRMPD1Q5SYB0 1578 aa23.26■■□□□ 1.31
NUP188-206ENST00000485158 EEA1Q15075 1411 aa23.25■■□□□ 1.31
NUP188-206ENST00000485158 BCORL1Q5H9F3 1711 aa23.2■■□□□ 1.3
NUP188-206ENST00000485158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
NUP188-206ENST00000485158 HNRNPUL2Q1KMD3 747 aaKnown RBP23.18■■□□□ 1.3
NUP188-206ENST00000485158 FHOD3Q2V2M9 1422 aa23.17■■□□□ 1.3
NUP188-206ENST00000485158 PLEKHD1A6NEE1 506 aa23.16■■□□□ 1.3
NUP188-206ENST00000485158 DENND4BO75064 1496 aaPredicted RBP23.15■■□□□ 1.3
NUP188-206ENST00000485158 ARHGEF40Q8TER5 1519 aa23.14■■□□□ 1.3
NUP188-206ENST00000485158 RICTORQ6R327 1708 aa23.14■■□□□ 1.3
NUP188-206ENST00000485158 MADDQ8WXG6 1647 aa23.14■■□□□ 1.29
NUP188-206ENST00000485158 AKNAQ7Z591 1439 aa23.13■■□□□ 1.29
NUP188-206ENST00000485158 EFCAB5A4FU69 1503 aa23.13■■□□□ 1.29
NUP188-206ENST00000485158 FANCAO15360 1455 aa23.12■■□□□ 1.29
NUP188-206ENST00000485158 FBXO41Q8TF61 875 aa23.12■■□□□ 1.29
NUP188-206ENST00000485158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.291e-6■■■■■ 29.5
NUP188-206ENST00000485158 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
NUP188-206ENST00000485158 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
NUP188-206ENST00000485158 ZMYM4Q5VZL5 1548 aa23.1■■□□□ 1.29
NUP188-206ENST00000485158 LMTK3Q96Q04 1460 aa23.1■■□□□ 1.29
NUP188-206ENST00000485158 ARID4BQ4LE39 1312 aaPredicted RBP23.08■■□□□ 1.29
NUP188-206ENST00000485158 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
NUP188-206ENST00000485158 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
NUP188-206ENST00000485158 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
NUP188-206ENST00000485158 POGZQ7Z3K3 1410 aa23.01■■□□□ 1.27
NUP188-206ENST00000485158 RIMS1Q86UR5 1692 aaKnown RBP23.01■■□□□ 1.27
NUP188-206ENST00000485158 PLCH2O75038 1416 aa23■■□□□ 1.27
NUP188-206ENST00000485158 ZFYVE16Q7Z3T8 1539 aa23■■□□□ 1.27
NUP188-206ENST00000485158 YEATS2Q9ULM3 1422 aa22.99■■□□□ 1.27
NUP188-206ENST00000485158 SIGLEC1Q9BZZ2 1709 aa22.98■■□□□ 1.27
NUP188-206ENST00000485158 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
NUP188-206ENST00000485158 HECW1Q76N89 1606 aa22.96■■□□□ 1.27
NUP188-206ENST00000485158 SCAPERQ9BY12 1400 aa22.93■■□□□ 1.26
NUP188-206ENST00000485158 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
NUP188-206ENST00000485158 ATP10AO60312 1499 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms