RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 WRNQ14191 1432 aaPredicted RBP eCLIP33.14■■■□□ 2.9
DDR1-245ENST00000484556 MAPKBP1O60336 1514 aa33.12■■■□□ 2.89
DDR1-245ENST00000484556 TSPOAP1O95153 1857 aa33.07■■■□□ 2.88
DDR1-245ENST00000484556 ERICH3Q5RHP9 1530 aa33.05■■■□□ 2.88
DDR1-245ENST00000484556 ADCY10Q96PN6 1610 aa33.04■■■□□ 2.88
DDR1-245ENST00000484556 JPH4Q96JJ6 628 aa33.04■■■□□ 2.88
DDR1-245ENST00000484556 NPM1P06748 294 aaKnown RBP eCLIP33.03■■■□□ 2.88
DDR1-245ENST00000484556 BIVM-ERCC5R4GMW8 1640 aa33.01■■■□□ 2.87
DDR1-245ENST00000484556 RUSC2Q8N2Y8 1516 aa33.01■■■□□ 2.87
DDR1-245ENST00000484556 TOP2BQ02880 1626 aa32.97■■■□□ 2.87
DDR1-245ENST00000484556 ADGRL1O94910 1474 aa32.78■■■□□ 2.84
DDR1-245ENST00000484556 HECW2Q9P2P5 1572 aa32.69■■■□□ 2.82
DDR1-245ENST00000484556 PPRC1Q5VV67 1664 aaKnown RBP32.69■■■□□ 2.82
DDR1-245ENST00000484556 KIAA0586Q9BVV6 1533 aa32.61■■■□□ 2.81
DDR1-245ENST00000484556 TTBK1Q5TCY1 1321 aaPredicted RBP32.57■■■□□ 2.8
DDR1-245ENST00000484556 GLI2P10070 1586 aa32.53■■■□□ 2.8
DDR1-245ENST00000484556 PTPRGP23470 1445 aa32.52■■■□□ 2.8
DDR1-245ENST00000484556 ASXL2Q76L83 1435 aa32.52■■■□□ 2.8
DDR1-245ENST00000484556 ABCC2Q92887 1545 aa32.51■■■□□ 2.8
DDR1-245ENST00000484556 COL17A1Q9UMD9 1497 aaPredicted RBP32.5■■■□□ 2.79
DDR1-245ENST00000484556 SUPT5HO00267 1087 aaKnown RBP32.5■■■□□ 2.79
DDR1-245ENST00000484556 CUL7Q14999 1698 aa32.5■■■□□ 2.79
DDR1-245ENST00000484556 PLB1Q6P1J6 1458 aa32.46■■■□□ 2.79
DDR1-245ENST00000484556 MAP3K4Q9Y6R4 1608 aa32.38■■■□□ 2.77
DDR1-245ENST00000484556 IGF1RP08069 1367 aa32.36■■■□□ 2.77
DDR1-245ENST00000484556 TNIKQ9UKE5 1360 aa32.36■■■□□ 2.77
DDR1-245ENST00000484556 CARMIL2Q6F5E8 1435 aa32.32■■■□□ 2.76
DDR1-245ENST00000484556 EPRSP07814 1512 aaKnown RBP32.31■■■□□ 2.76
DDR1-245ENST00000484556 UHRF1BP1LA0JNW5 1464 aa32.3■■■□□ 2.76
DDR1-245ENST00000484556 TEX14Q8IWB6 1497 aa32.29■■■□□ 2.76
DDR1-245ENST00000484556 KIF27Q86VH2 1401 aa32.25■■■□□ 2.75
DDR1-245ENST00000484556 UACAQ9BZF9 1416 aa32.25■■■□□ 2.75
DDR1-245ENST00000484556 IQGAP2Q13576 1575 aa32.22■■■□□ 2.75
DDR1-245ENST00000484556 ZCCHC11Q5TAX3 1644 aaKnown RBP32.21■■■□□ 2.75
DDR1-245ENST00000484556 FBXO41Q8TF61 875 aa32.2■■■□□ 2.75
DDR1-245ENST00000484556 KDM5BQ9UGL1 1544 aa32.19■■■□□ 2.74
DDR1-245ENST00000484556 DISP1Q96F81 1524 aa32.15■■■□□ 2.74
DDR1-245ENST00000484556 CARMIL1Q5VZK9 1371 aa32.14■■■□□ 2.74
DDR1-245ENST00000484556 KIF21BO75037 1637 aa32.08■■■□□ 2.73
DDR1-245ENST00000484556 WDR7Q9Y4E6 1490 aa32.03■■■□□ 2.72
DDR1-245ENST00000484556 KIAA0556O60303 1618 aa31.97■■■□□ 2.71
DDR1-245ENST00000484556 CFAP43Q8NDM7 1665 aa31.95■■■□□ 2.71
DDR1-245ENST00000484556 MAGI3Q5TCQ9 1506 aa31.94■■■□□ 2.7
DDR1-245ENST00000484556 UGGT2Q9NYU1 1516 aa31.94■■■□□ 2.7
DDR1-245ENST00000484556 CD109Q6YHK3 1445 aa31.92■■■□□ 2.7
DDR1-245ENST00000484556 KCNH8Q96L42 1107 aa31.84■■■□□ 2.69
DDR1-245ENST00000484556 PTPRMP28827 1452 aa31.83■■■□□ 2.69
DDR1-245ENST00000484556 ADAMTSL3P82987 1691 aa31.8■■■□□ 2.68
DDR1-245ENST00000484556 RAPGEF2Q9Y4G8 1499 aa31.73■■■□□ 2.67
DDR1-245ENST00000484556 PCF11O94913 1555 aaKnown RBP31.72■■■□□ 2.67
DDR1-245ENST00000484556 LMTK3Q96Q04 1460 aa31.72■■■□□ 2.67
DDR1-245ENST00000484556 ARAP3Q8WWN8 1544 aa31.71■■■□□ 2.67
DDR1-245ENST00000484556 ABCA8O94911 1581 aa31.71■■■□□ 2.67
DDR1-245ENST00000484556 MADDQ8WXG6 1647 aa31.67■■■□□ 2.66
DDR1-245ENST00000484556 CTTNBP2Q8WZ74 1663 aa31.64■■■□□ 2.66
DDR1-245ENST00000484556 BCORL1Q5H9F3 1711 aa31.64■■■□□ 2.66
DDR1-245ENST00000484556 GOLGA3Q08378 1498 aa31.55■■■□□ 2.64
DDR1-245ENST00000484556 ARID3CA6NKF2 412 aa31.54■■■□□ 2.64
DDR1-245ENST00000484556 RAPGEF3O95398 923 aa31.54■■■□□ 2.64
DDR1-245ENST00000484556 RIMS1Q86UR5 1692 aaKnown RBP31.54■■■□□ 2.64
DDR1-245ENST00000484556 ARID4BQ4LE39 1312 aaPredicted RBP31.51■■■□□ 2.64
DDR1-245ENST00000484556 FRMPD1Q5SYB0 1578 aa31.51■■■□□ 2.63
DDR1-245ENST00000484556 ABCA9Q8IUA7 1624 aa31.5■■■□□ 2.63
DDR1-245ENST00000484556 HSPA2P54652 639 aa31.48■■■□□ 2.63
DDR1-245ENST00000484556 PHLDB1Q86UU1 1377 aa31.43■■■□□ 2.62
DDR1-245ENST00000484556 ILDR2Q71H61 639 aa31.42■■■□□ 2.62
DDR1-245ENST00000484556 ATP10BO94823 1461 aa31.41■■■□□ 2.62
DDR1-245ENST00000484556 NEO1Q92859 1461 aa31.4■■■□□ 2.62
DDR1-245ENST00000484556 PLPPR3Q6T4P5 718 aa31.4■■■□□ 2.62
DDR1-245ENST00000484556 CERKQ8TCT0 537 aa31.4■■■□□ 2.62
DDR1-245ENST00000484556 ARHGEF40Q8TER5 1519 aa31.38■■■□□ 2.61
DDR1-245ENST00000484556 DISP3Q9P2K9 1392 aa31.37■■■□□ 2.61
DDR1-245ENST00000484556 SOCS7O14512 581 aa31.32■■■□□ 2.6
DDR1-245ENST00000484556 P3H3Q8IVL6 736 aa31.28■■■□□ 2.6
DDR1-245ENST00000484556 RICTORQ6R327 1708 aa31.27■■■□□ 2.6
DDR1-245ENST00000484556 SIGLEC1Q9BZZ2 1709 aa31.27■■■□□ 2.6
DDR1-245ENST00000484556 DENND4BO75064 1496 aaPredicted RBP31.2■■■□□ 2.58
DDR1-245ENST00000484556 RAPGEF6Q8TEU7 1601 aa31.2■■■□□ 2.58
DDR1-245ENST00000484556 FANCAO15360 1455 aa31.19■■■□□ 2.58
DDR1-245ENST00000484556 FER1L4A9Z1Z3 1794 aa31.17■■■□□ 2.58
DDR1-245ENST00000484556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.17■■■□□ 2.58
DDR1-245ENST00000484556 HNRNPUL2Q1KMD3 747 aaKnown RBP31.17■■■□□ 2.58
DDR1-245ENST00000484556 FAM9AQ8IZU1 332 aaPredicted RBP31.17■■■□□ 2.58
DDR1-245ENST00000484556 POGZQ7Z3K3 1410 aa31.16■■■□□ 2.58
DDR1-245ENST00000484556 PRXQ9BXM0 1461 aa31.14■■■□□ 2.58
DDR1-245ENST00000484556 SPATA31D1Q6ZQQ2 1576 aa31.14■■■□□ 2.58
DDR1-245ENST00000484556 AKNAQ7Z591 1439 aa31.14■■■□□ 2.58
DDR1-245ENST00000484556 ZFYVE16Q7Z3T8 1539 aa31.12■■■□□ 2.57
DDR1-245ENST00000484556 MLECQ14165 292 aa31.11■■■□□ 2.57
DDR1-245ENST00000484556 FHOD3Q2V2M9 1422 aa31.11■■■□□ 2.57
DDR1-245ENST00000484556 TTC37Q6PGP7 1564 aa31.11■■■□□ 2.57
DDR1-245ENST00000484556 YEATS2Q9ULM3 1422 aa31.11■■■□□ 2.57
DDR1-245ENST00000484556 ZMYM4Q5VZL5 1548 aa31.1■■■□□ 2.57
DDR1-245ENST00000484556 SAMD9Q5K651 1589 aa31.09■■■□□ 2.57
DDR1-245ENST00000484556 CFAP74Q9C0B2 1584 aa31.08■■■□□ 2.57
DDR1-245ENST00000484556 PREX1Q8TCU6 1659 aa31.07■■■□□ 2.56
DDR1-245ENST00000484556 EFCAB5A4FU69 1503 aa31.07■■■□□ 2.56
DDR1-245ENST00000484556 NUP153P49790 1475 aaKnown RBP31.06■■■□□ 2.56
DDR1-245ENST00000484556 STRCQ7RTU9 1775 aa31.02■■■□□ 2.56
DDR1-245ENST00000484556 HECW1Q76N89 1606 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms