RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
DNMT3A-213ENST00000484184 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
DNMT3A-213ENST00000484184 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
DNMT3A-213ENST00000484184 MAPKBP1O60336 1514 aa22.96■■□□□ 1.27
DNMT3A-213ENST00000484184 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
DNMT3A-213ENST00000484184 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
DNMT3A-213ENST00000484184 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
DNMT3A-213ENST00000484184 KIAA0586Q9BVV6 1533 aa22.84■■□□□ 1.25
DNMT3A-213ENST00000484184 KDM4FA0A1W2PPD8 638 aa22.82■■□□□ 1.24
DNMT3A-213ENST00000484184 IGF1RP08069 1367 aa22.8■■□□□ 1.24
DNMT3A-213ENST00000484184 KDM6BO15054 1643 aa22.79■■□□□ 1.24
DNMT3A-213ENST00000484184 TSPOAP1O95153 1857 aa22.75■■□□□ 1.23
DNMT3A-213ENST00000484184 CUL7Q14999 1698 aa22.71■■□□□ 1.23
DNMT3A-213ENST00000484184 KIF27Q86VH2 1401 aa22.7■■□□□ 1.22
DNMT3A-213ENST00000484184 PTPRGP23470 1445 aa22.68■■□□□ 1.22
DNMT3A-213ENST00000484184 ABCC2Q92887 1545 aa22.63■■□□□ 1.21
DNMT3A-213ENST00000484184 PPRC1Q5VV67 1664 aaKnown RBP22.62■■□□□ 1.21
DNMT3A-213ENST00000484184 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
DNMT3A-213ENST00000484184 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
DNMT3A-213ENST00000484184 GLI2P10070 1586 aa22.59■■□□□ 1.21
DNMT3A-213ENST00000484184 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
DNMT3A-213ENST00000484184 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
DNMT3A-213ENST00000484184 PLB1Q6P1J6 1458 aa22.57■■□□□ 1.2
DNMT3A-213ENST00000484184 CARMIL2Q6F5E8 1435 aa22.57■■□□□ 1.2
DNMT3A-213ENST00000484184 UHRF1BP1LA0JNW5 1464 aa22.56■■□□□ 1.2
DNMT3A-213ENST00000484184 IQGAP2Q13576 1575 aa22.53■■□□□ 1.2
DNMT3A-213ENST00000484184 COL17A1Q9UMD9 1497 aaPredicted RBP22.53■■□□□ 1.2
DNMT3A-213ENST00000484184 DISP1Q96F81 1524 aa22.52■■□□□ 1.19
DNMT3A-213ENST00000484184 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
DNMT3A-213ENST00000484184 ILDR1Q86SU0 546 aaPredicted RBP22.5■■□□□ 1.19
DNMT3A-213ENST00000484184 ADGRL1O94910 1474 aa22.49■■□□□ 1.19
DNMT3A-213ENST00000484184 KDM5BQ9UGL1 1544 aa22.47■■□□□ 1.19
DNMT3A-213ENST00000484184 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
DNMT3A-213ENST00000484184 MAP3K4Q9Y6R4 1608 aa22.45■■□□□ 1.18
DNMT3A-213ENST00000484184 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
DNMT3A-213ENST00000484184 ZCCHC11Q5TAX3 1644 aaKnown RBP22.39■■□□□ 1.17
DNMT3A-213ENST00000484184 TEX14Q8IWB6 1497 aa22.35■■□□□ 1.17
DNMT3A-213ENST00000484184 KIAA0556O60303 1618 aa22.35■■□□□ 1.17
DNMT3A-213ENST00000484184 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
DNMT3A-213ENST00000484184 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
DNMT3A-213ENST00000484184 WDR7Q9Y4E6 1490 aa22.29■■□□□ 1.16
DNMT3A-213ENST00000484184 MAGI3Q5TCQ9 1506 aa22.23■■□□□ 1.15
DNMT3A-213ENST00000484184 ABCA8O94911 1581 aa22.21■■□□□ 1.15
DNMT3A-213ENST00000484184 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
DNMT3A-213ENST00000484184 CFAP43Q8NDM7 1665 aa22.19■■□□□ 1.14
DNMT3A-213ENST00000484184 CTTNBP2Q8WZ74 1663 aa22.16■■□□□ 1.14
DNMT3A-213ENST00000484184 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
DNMT3A-213ENST00000484184 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
DNMT3A-213ENST00000484184 KIF21BO75037 1637 aa22.09■■□□□ 1.13
DNMT3A-213ENST00000484184 ARAP3Q8WWN8 1544 aa22.07■■□□□ 1.12
DNMT3A-213ENST00000484184 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
DNMT3A-213ENST00000484184 ATP10BO94823 1461 aa22.02■■□□□ 1.12
DNMT3A-213ENST00000484184 ARID3CA6NKF2 412 aa21.97■■□□□ 1.11
DNMT3A-213ENST00000484184 ADAMTSL3P82987 1691 aa21.97■■□□□ 1.11
DNMT3A-213ENST00000484184 ABCA9Q8IUA7 1624 aa21.96■■□□□ 1.11
DNMT3A-213ENST00000484184 PTPRMP28827 1452 aa21.95■■□□□ 1.1
DNMT3A-213ENST00000484184 FBXO41Q8TF61 875 aa21.94■■□□□ 1.1
DNMT3A-213ENST00000484184 PHLDB1Q86UU1 1377 aa21.94■■□□□ 1.1
DNMT3A-213ENST00000484184 RAPGEF3O95398 923 aa21.92■■□□□ 1.1
DNMT3A-213ENST00000484184 P3H3Q8IVL6 736 aa21.92■■□□□ 1.1
DNMT3A-213ENST00000484184 FRMPD1Q5SYB0 1578 aa21.89■■□□□ 1.09
DNMT3A-213ENST00000484184 NEO1Q92859 1461 aa21.89■■□□□ 1.09
DNMT3A-213ENST00000484184 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
DNMT3A-213ENST00000484184 BCORL1Q5H9F3 1711 aa21.86■■□□□ 1.09
DNMT3A-213ENST00000484184 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
DNMT3A-213ENST00000484184 MADDQ8WXG6 1647 aa21.82■■□□□ 1.08
DNMT3A-213ENST00000484184 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
DNMT3A-213ENST00000484184 LMTK3Q96Q04 1460 aa21.81■■□□□ 1.08
DNMT3A-213ENST00000484184 PCF11O94913 1555 aaKnown RBP21.8■■□□□ 1.08
DNMT3A-213ENST00000484184 NUP153P49790 1475 aaKnown RBP21.8■■□□□ 1.08
DNMT3A-213ENST00000484184 ARID4BQ4LE39 1312 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-213ENST00000484184 ARHGEF40Q8TER5 1519 aa21.75■■□□□ 1.07
DNMT3A-213ENST00000484184 CSRNP3Q8WYN3 585 aa21.74■■□□□ 1.07
DNMT3A-213ENST00000484184 RICTORQ6R327 1708 aa21.74■■□□□ 1.07
DNMT3A-213ENST00000484184 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-213ENST00000484184 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-213ENST00000484184 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
DNMT3A-213ENST00000484184 DENND4BO75064 1496 aaPredicted RBP21.71■■□□□ 1.07
DNMT3A-213ENST00000484184 RIMS1Q86UR5 1692 aaKnown RBP21.71■■□□□ 1.07
DNMT3A-213ENST00000484184 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
DNMT3A-213ENST00000484184 SIGLEC1Q9BZZ2 1709 aa21.68■■□□□ 1.06
DNMT3A-213ENST00000484184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
DNMT3A-213ENST00000484184 FANCAO15360 1455 aa21.66■■□□□ 1.06
DNMT3A-213ENST00000484184 PLEKHD1A6NEE1 506 aa21.66■■□□□ 1.06
DNMT3A-213ENST00000484184 HSPA2P54652 639 aa21.66■■□□□ 1.06
DNMT3A-213ENST00000484184 ZMYM4Q5VZL5 1548 aa21.65■■□□□ 1.06
DNMT3A-213ENST00000484184 YEATS2Q9ULM3 1422 aa21.64■■□□□ 1.06
DNMT3A-213ENST00000484184 TTC37Q6PGP7 1564 aa21.63■■□□□ 1.05
DNMT3A-213ENST00000484184 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
DNMT3A-213ENST00000484184 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
DNMT3A-213ENST00000484184 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
DNMT3A-213ENST00000484184 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
DNMT3A-213ENST00000484184 POGZQ7Z3K3 1410 aa21.58■■□□□ 1.05
DNMT3A-213ENST00000484184 EFCAB5A4FU69 1503 aa21.58■■□□□ 1.04
DNMT3A-213ENST00000484184 HECW1Q76N89 1606 aa21.57■■□□□ 1.04
DNMT3A-213ENST00000484184 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
DNMT3A-213ENST00000484184 EEA1Q15075 1411 aa21.54■■□□□ 1.04
DNMT3A-213ENST00000484184 CERKQ8TCT0 537 aa21.53■■□□□ 1.04
DNMT3A-213ENST00000484184 CDK13Q14004 1512 aaKnown RBP21.53■■□□□ 1.04
DNMT3A-213ENST00000484184 FER1L4A9Z1Z3 1794 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms