RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 ABCC10Q5T3U5 1492 aa15.72■□□□□ 0.11
RTFDC1-208ENST00000484084 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
RTFDC1-208ENST00000484084 MAPKBP1O60336 1514 aa15.7■□□□□ 0.1
RTFDC1-208ENST00000484084 ADCY10Q96PN6 1610 aa15.7■□□□□ 0.1
RTFDC1-208ENST00000484084 DIP2BQ9P265 1576 aa15.69■□□□□ 0.1
RTFDC1-208ENST00000484084 FAM69CQ0P6D2 419 aa15.65■□□□□ 0.1
RTFDC1-208ENST00000484084 KDM4FA0A1W2PPD8 638 aa15.62■□□□□ 0.09
RTFDC1-208ENST00000484084 IGF1RP08069 1367 aa15.6■□□□□ 0.09
RTFDC1-208ENST00000484084 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
RTFDC1-208ENST00000484084 KDM6BO15054 1643 aa15.56■□□□□ 0.08
RTFDC1-208ENST00000484084 TSPOAP1O95153 1857 aa15.53■□□□□ 0.08
RTFDC1-208ENST00000484084 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
RTFDC1-208ENST00000484084 PPRC1Q5VV67 1664 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-208ENST00000484084 CUL7Q14999 1698 aa15.51■□□□□ 0.07
RTFDC1-208ENST00000484084 PTPRGP23470 1445 aa15.47■□□□□ 0.07
RTFDC1-208ENST00000484084 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
RTFDC1-208ENST00000484084 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
RTFDC1-208ENST00000484084 GLI2P10070 1586 aa15.45■□□□□ 0.06
RTFDC1-208ENST00000484084 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
RTFDC1-208ENST00000484084 ASXL2Q76L83 1435 aa15.43■□□□□ 0.06
RTFDC1-208ENST00000484084 UHRF1BP1LA0JNW5 1464 aa15.42■□□□□ 0.06
RTFDC1-208ENST00000484084 DISP1Q96F81 1524 aa15.42■□□□□ 0.06
RTFDC1-208ENST00000484084 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
RTFDC1-208ENST00000484084 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
RTFDC1-208ENST00000484084 PLB1Q6P1J6 1458 aa15.39■□□□□ 0.05
RTFDC1-208ENST00000484084 IQGAP2Q13576 1575 aa15.38■□□□□ 0.05
RTFDC1-208ENST00000484084 ILDR1Q86SU0 546 aaPredicted RBP15.38■□□□□ 0.05
RTFDC1-208ENST00000484084 MAP3K4Q9Y6R4 1608 aa15.38■□□□□ 0.05
RTFDC1-208ENST00000484084 ADGRL1O94910 1474 aa15.37■□□□□ 0.05
RTFDC1-208ENST00000484084 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
RTFDC1-208ENST00000484084 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
RTFDC1-208ENST00000484084 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-208ENST00000484084 TTBK1Q5TCY1 1321 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-208ENST00000484084 CARMIL2Q6F5E8 1435 aa15.35■□□□□ 0.05
RTFDC1-208ENST00000484084 UGGT2Q9NYU1 1516 aa15.32■□□□□ 0.04
RTFDC1-208ENST00000484084 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-208ENST00000484084 KIAA0556O60303 1618 aa15.28■□□□□ 0.04
RTFDC1-208ENST00000484084 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.03
RTFDC1-208ENST00000484084 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
RTFDC1-208ENST00000484084 TEX14Q8IWB6 1497 aa15.23■□□□□ 0.03
RTFDC1-208ENST00000484084 WDR7Q9Y4E6 1490 aa15.22■□□□□ 0.03
RTFDC1-208ENST00000484084 MAGI3Q5TCQ9 1506 aa15.19■□□□□ 0.02
RTFDC1-208ENST00000484084 ABCA8O94911 1581 aa15.19■□□□□ 0.02
RTFDC1-208ENST00000484084 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
RTFDC1-208ENST00000484084 CTTNBP2Q8WZ74 1663 aa15.15■□□□□ 0.02
RTFDC1-208ENST00000484084 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
RTFDC1-208ENST00000484084 KIF21BO75037 1637 aa15.11■□□□□ 0.01
RTFDC1-208ENST00000484084 ARAP3Q8WWN8 1544 aa15.09■□□□□ 0.01
RTFDC1-208ENST00000484084 PRXQ9BXM0 1461 aa15.08■□□□□ 0.01
RTFDC1-208ENST00000484084 KCNH8Q96L42 1107 aa15.08■□□□□ 0
RTFDC1-208ENST00000484084 GOLGA3Q08378 1498 aa15.07■□□□□ 0
RTFDC1-208ENST00000484084 ATP10BO94823 1461 aa15.06■□□□□ 0
RTFDC1-208ENST00000484084 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
RTFDC1-208ENST00000484084 ABCA9Q8IUA7 1624 aa15.03■□□□□ -0
RTFDC1-208ENST00000484084 FRMPD1Q5SYB0 1578 aa15.01□□□□□ -0.01
RTFDC1-208ENST00000484084 PTPRMP28827 1452 aa15□□□□□ -0.01
RTFDC1-208ENST00000484084 ARID3CA6NKF2 412 aa14.98□□□□□ -0.01
RTFDC1-208ENST00000484084 SAMD9Q5K651 1589 aa14.97□□□□□ -0.01
RTFDC1-208ENST00000484084 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
RTFDC1-208ENST00000484084 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
RTFDC1-208ENST00000484084 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
RTFDC1-208ENST00000484084 FBXO41Q8TF61 875 aa14.94□□□□□ -0.02
RTFDC1-208ENST00000484084 PHLDB1Q86UU1 1377 aa14.94□□□□□ -0.02
RTFDC1-208ENST00000484084 NEO1Q92859 1461 aa14.94□□□□□ -0.02
RTFDC1-208ENST00000484084 LMTK3Q96Q04 1460 aa14.93□□□□□ -0.02
RTFDC1-208ENST00000484084 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
RTFDC1-208ENST00000484084 RAPGEF6Q8TEU7 1601 aa14.92□□□□□ -0.02
RTFDC1-208ENST00000484084 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
RTFDC1-208ENST00000484084 SIGLEC1Q9BZZ2 1709 aa14.91□□□□□ -0.02
RTFDC1-208ENST00000484084 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
RTFDC1-208ENST00000484084 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
RTFDC1-208ENST00000484084 ARHGEF40Q8TER5 1519 aa14.86□□□□□ -0.03
RTFDC1-208ENST00000484084 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
RTFDC1-208ENST00000484084 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.03
RTFDC1-208ENST00000484084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
RTFDC1-208ENST00000484084 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
RTFDC1-208ENST00000484084 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
RTFDC1-208ENST00000484084 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
RTFDC1-208ENST00000484084 TTC37Q6PGP7 1564 aa14.81□□□□□ -0.04
RTFDC1-208ENST00000484084 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
RTFDC1-208ENST00000484084 DENND4BO75064 1496 aaPredicted RBP14.8□□□□□ -0.04
RTFDC1-208ENST00000484084 FANCAO15360 1455 aa14.79□□□□□ -0.04
RTFDC1-208ENST00000484084 HSPA2P54652 639 aa14.78□□□□□ -0.04
RTFDC1-208ENST00000484084 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
RTFDC1-208ENST00000484084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
RTFDC1-208ENST00000484084 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
RTFDC1-208ENST00000484084 HECW1Q76N89 1606 aa14.74□□□□□ -0.05
RTFDC1-208ENST00000484084 CFAP74Q9C0B2 1584 aa14.74□□□□□ -0.05
RTFDC1-208ENST00000484084 ZFYVE16Q7Z3T8 1539 aa14.74□□□□□ -0.05
RTFDC1-208ENST00000484084 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
RTFDC1-208ENST00000484084 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
RTFDC1-208ENST00000484084 MAGI2Q86UL8 1455 aa14.72□□□□□ -0.05
RTFDC1-208ENST00000484084 EFCAB5A4FU69 1503 aa14.71□□□□□ -0.05
RTFDC1-208ENST00000484084 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.05
RTFDC1-208ENST00000484084 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-208ENST00000484084 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.06
RTFDC1-208ENST00000484084 PLCH2O75038 1416 aa14.7□□□□□ -0.06
RTFDC1-208ENST00000484084 POGZQ7Z3K3 1410 aa14.7□□□□□ -0.06
RTFDC1-208ENST00000484084 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
RTFDC1-208ENST00000484084 CERKQ8TCT0 537 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms