RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
UBR4-213ENST00000483922 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
UBR4-213ENST00000483922 ABCC10Q5T3U5 1492 aa23.1■■□□□ 1.29
UBR4-213ENST00000483922 IGF1RP08069 1367 aa23.05■■□□□ 1.28
UBR4-213ENST00000483922 ADCY10Q96PN6 1610 aa23.04■■□□□ 1.28
UBR4-213ENST00000483922 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
UBR4-213ENST00000483922 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
UBR4-213ENST00000483922 DIP2BQ9P265 1576 aa23.01■■□□□ 1.27
UBR4-213ENST00000483922 KIAA0586Q9BVV6 1533 aa22.99■■□□□ 1.27
UBR4-213ENST00000483922 KDM4FA0A1W2PPD8 638 aa22.95■■□□□ 1.26
UBR4-213ENST00000483922 KIF27Q86VH2 1401 aa22.88■■□□□ 1.25
UBR4-213ENST00000483922 PTPRGP23470 1445 aa22.85■■□□□ 1.25
UBR4-213ENST00000483922 KDM6BO15054 1643 aa22.85■■□□□ 1.25
UBR4-213ENST00000483922 CUL7Q14999 1698 aa22.84■■□□□ 1.25
UBR4-213ENST00000483922 TTBK1Q5TCY1 1321 aaPredicted RBP22.83■■□□□ 1.25
UBR4-213ENST00000483922 TSPOAP1O95153 1857 aa22.83■■□□□ 1.25
UBR4-213ENST00000483922 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
UBR4-213ENST00000483922 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
UBR4-213ENST00000483922 ABCC2Q92887 1545 aa22.76■■□□□ 1.23
UBR4-213ENST00000483922 ASXL2Q76L83 1435 aa22.74■■□□□ 1.23
UBR4-213ENST00000483922 PPRC1Q5VV67 1664 aaKnown RBP22.73■■□□□ 1.23
UBR4-213ENST00000483922 CARMIL2Q6F5E8 1435 aa22.7■■□□□ 1.22
UBR4-213ENST00000483922 COL17A1Q9UMD9 1497 aaPredicted RBP22.7■■□□□ 1.22
UBR4-213ENST00000483922 DISP1Q96F81 1524 aa22.7■■□□□ 1.22
UBR4-213ENST00000483922 GLI2P10070 1586 aa22.69■■□□□ 1.22
UBR4-213ENST00000483922 UHRF1BP1LA0JNW5 1464 aa22.68■■□□□ 1.22
UBR4-213ENST00000483922 PLB1Q6P1J6 1458 aa22.67■■□□□ 1.22
UBR4-213ENST00000483922 IQGAP2Q13576 1575 aa22.67■■□□□ 1.22
UBR4-213ENST00000483922 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
UBR4-213ENST00000483922 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
UBR4-213ENST00000483922 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
UBR4-213ENST00000483922 UGGT2Q9NYU1 1516 aa22.57■■□□□ 1.2
UBR4-213ENST00000483922 ADGRL1O94910 1474 aa22.56■■□□□ 1.2
UBR4-213ENST00000483922 ILDR1Q86SU0 546 aaPredicted RBP22.55■■□□□ 1.2
UBR4-213ENST00000483922 MAP3K4Q9Y6R4 1608 aa22.55■■□□□ 1.2
UBR4-213ENST00000483922 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
UBR4-213ENST00000483922 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
UBR4-213ENST00000483922 KIAA0556O60303 1618 aa22.49■■□□□ 1.19
UBR4-213ENST00000483922 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
UBR4-213ENST00000483922 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
UBR4-213ENST00000483922 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
UBR4-213ENST00000483922 ABCA8O94911 1581 aa22.36■■□□□ 1.17
UBR4-213ENST00000483922 HECW2Q9P2P5 1572 aa22.35■■□□□ 1.17
UBR4-213ENST00000483922 CD109Q6YHK3 1445 aa22.35■■□□□ 1.17
UBR4-213ENST00000483922 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
UBR4-213ENST00000483922 CTTNBP2Q8WZ74 1663 aa22.3■■□□□ 1.16
UBR4-213ENST00000483922 PRXQ9BXM0 1461 aa22.28■■□□□ 1.16
UBR4-213ENST00000483922 CFAP43Q8NDM7 1665 aa22.27■■□□□ 1.16
UBR4-213ENST00000483922 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
UBR4-213ENST00000483922 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
UBR4-213ENST00000483922 P3H3Q8IVL6 736 aa22.23■■□□□ 1.15
UBR4-213ENST00000483922 ATP10BO94823 1461 aa22.22■■□□□ 1.15
UBR4-213ENST00000483922 KIF21BO75037 1637 aa22.18■■□□□ 1.14
UBR4-213ENST00000483922 ARAP3Q8WWN8 1544 aa22.18■■□□□ 1.14
UBR4-213ENST00000483922 RAPGEF3O95398 923 aa22.12■■□□□ 1.13
UBR4-213ENST00000483922 ABCA9Q8IUA7 1624 aa22.09■■□□□ 1.13
UBR4-213ENST00000483922 ADAMTSL3P82987 1691 aa22.05■■□□□ 1.12
UBR4-213ENST00000483922 SAMD9Q5K651 1589 aa22.04■■□□□ 1.12
UBR4-213ENST00000483922 PTPRMP28827 1452 aa22.04■■□□□ 1.12
UBR4-213ENST00000483922 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
UBR4-213ENST00000483922 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
UBR4-213ENST00000483922 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
UBR4-213ENST00000483922 RAPGEF6Q8TEU7 1601 aa22■■□□□ 1.11
UBR4-213ENST00000483922 NUP153P49790 1475 aaKnown RBP21.99■■□□□ 1.11
UBR4-213ENST00000483922 NEO1Q92859 1461 aa21.99■■□□□ 1.11
UBR4-213ENST00000483922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
UBR4-213ENST00000483922 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
UBR4-213ENST00000483922 FBXO41Q8TF61 875 aa21.96■■□□□ 1.11
UBR4-213ENST00000483922 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
UBR4-213ENST00000483922 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
UBR4-213ENST00000483922 RANGAP1P46060 587 aaPredicted RBP21.93■■□□□ 1.1
UBR4-213ENST00000483922 MADDQ8WXG6 1647 aa21.91■■□□□ 1.1
UBR4-213ENST00000483922 FHOD3Q2V2M9 1422 aa21.91■■□□□ 1.1
UBR4-213ENST00000483922 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.1
UBR4-213ENST00000483922 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.09
UBR4-213ENST00000483922 AKNAQ7Z591 1439 aa21.87■■□□□ 1.09
UBR4-213ENST00000483922 PLEKHD1A6NEE1 506 aa21.85■■□□□ 1.09
UBR4-213ENST00000483922 RICTORQ6R327 1708 aa21.85■■□□□ 1.09
UBR4-213ENST00000483922 DENND4BO75064 1496 aaPredicted RBP21.84■■□□□ 1.09
UBR4-213ENST00000483922 SIGLEC1Q9BZZ2 1709 aa21.84■■□□□ 1.09
UBR4-213ENST00000483922 PCF11O94913 1555 aaKnown RBP21.84■■□□□ 1.09
UBR4-213ENST00000483922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.84■■□□□ 1.09
UBR4-213ENST00000483922 ARHGEF40Q8TER5 1519 aa21.81■■□□□ 1.08
UBR4-213ENST00000483922 HSPA2P54652 639 aa21.81■■□□□ 1.08
UBR4-213ENST00000483922 FANCAO15360 1455 aa21.81■■□□□ 1.08
UBR4-213ENST00000483922 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
UBR4-213ENST00000483922 RIMS1Q86UR5 1692 aaKnown RBP21.8■■□□□ 1.08
UBR4-213ENST00000483922 TTC37Q6PGP7 1564 aa21.78■■□□□ 1.08
UBR4-213ENST00000483922 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
UBR4-213ENST00000483922 CDK13Q14004 1512 aaKnown RBP21.74■■□□□ 1.07
UBR4-213ENST00000483922 ZMYM4Q5VZL5 1548 aa21.74■■□□□ 1.07
UBR4-213ENST00000483922 EEA1Q15075 1411 aa21.73■■□□□ 1.07
UBR4-213ENST00000483922 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
UBR4-213ENST00000483922 MLECQ14165 292 aa21.71■■□□□ 1.07
UBR4-213ENST00000483922 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.07
UBR4-213ENST00000483922 PLCH2O75038 1416 aa21.7■■□□□ 1.06
UBR4-213ENST00000483922 SCAPERQ9BY12 1400 aa21.69■■□□□ 1.06
UBR4-213ENST00000483922 CFAP74Q9C0B2 1584 aa21.69■■□□□ 1.06
UBR4-213ENST00000483922 EFCAB5A4FU69 1503 aa21.68■■□□□ 1.06
UBR4-213ENST00000483922 MAGI2Q86UL8 1455 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms