RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 L1TD1Q5T7N2 865 aaKnown RBP13.6□□□□□ -0.23
COL12A1-207ENST00000483888 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
COL12A1-207ENST00000483888 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-207ENST00000483888 PKNOX2Q96KN3 472 aa13.59□□□□□ -0.23
COL12A1-207ENST00000483888 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
COL12A1-207ENST00000483888 RSPH6AQ9H0K4 717 aa13.57□□□□□ -0.24
COL12A1-207ENST00000483888 PNNQ9H307 717 aaKnown RBP13.55□□□□□ -0.24
COL12A1-207ENST00000483888 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
COL12A1-207ENST00000483888 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
COL12A1-207ENST00000483888 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
COL12A1-207ENST00000483888 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.25
COL12A1-207ENST00000483888 TSHZ2Q9NRE2 1034 aa13.45□□□□□ -0.26
COL12A1-207ENST00000483888 TMC1Q8TDI8 760 aa13.45□□□□□ -0.26
COL12A1-207ENST00000483888 MRS2Q9HD23 443 aa13.43□□□□□ -0.26
COL12A1-207ENST00000483888 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
COL12A1-207ENST00000483888 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
COL12A1-207ENST00000483888 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
COL12A1-207ENST00000483888 ANO8Q9HCE9 1232 aaPredicted RBP13.39□□□□□ -0.27
COL12A1-207ENST00000483888 PTMSP20962 102 aa13.38□□□□□ -0.27
COL12A1-207ENST00000483888 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
COL12A1-207ENST00000483888 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
COL12A1-207ENST00000483888 ZRSR1Q15695 479 aaKnown RBP13.35□□□□□ -0.27
COL12A1-207ENST00000483888 GOLGA6L6A8MZA4 724 aa13.35□□□□□ -0.27
COL12A1-207ENST00000483888 CALRP27797 417 aaKnown RBP13.33□□□□□ -0.27
COL12A1-207ENST00000483888 APPP05067 770 aa13.33□□□□□ -0.28
COL12A1-207ENST00000483888 HSP90AB1P08238 724 aaKnown RBP13.32□□□□□ -0.28
COL12A1-207ENST00000483888 MYH16Q9H6N6 1097 aa13.3□□□□□ -0.28
COL12A1-207ENST00000483888 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
COL12A1-207ENST00000483888 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL12A1-207ENST00000483888 GOLGA6L3A6NEY3 463 aa13.27□□□□□ -0.28
COL12A1-207ENST00000483888 NRDCO43847 1150 aa13.27□□□□□ -0.29
COL12A1-207ENST00000483888 KIAA2012Q0VF49 1180 aa13.27□□□□□ -0.29
COL12A1-207ENST00000483888 DRC7Q8IY82 874 aa13.26□□□□□ -0.29
COL12A1-207ENST00000483888 IPO9Q96P70 1041 aaKnown RBP13.26□□□□□ -0.29
COL12A1-207ENST00000483888 RGS3P49796 1198 aa13.26□□□□□ -0.29
COL12A1-207ENST00000483888 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
COL12A1-207ENST00000483888 ZNF771Q7L3S4 317 aaPredicted RBP13.25□□□□□ -0.29
COL12A1-207ENST00000483888 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
COL12A1-207ENST00000483888 HSCBQ8IWL3 235 aa13.23□□□□□ -0.29
COL12A1-207ENST00000483888 SETQ01105 290 aaPredicted RBP13.22□□□□□ -0.29
COL12A1-207ENST00000483888 CASC1Q6TDU7 716 aa13.22□□□□□ -0.29
COL12A1-207ENST00000483888 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
COL12A1-207ENST00000483888 GSE1Q14687 1217 aa13.19□□□□□ -0.3
COL12A1-207ENST00000483888 GOLGA6L1Q8N7Z2 621 aa13.16□□□□□ -0.3
COL12A1-207ENST00000483888 SENP3-EIF4A1A0A087X0R7 540 aa13.16□□□□□ -0.3
COL12A1-207ENST00000483888 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
COL12A1-207ENST00000483888 FAM13BQ9NYF5 915 aa13.14□□□□□ -0.31
COL12A1-207ENST00000483888 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
COL12A1-207ENST00000483888 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
COL12A1-207ENST00000483888 MYO15BQ96JP2 1530 aa13.09□□□□□ -0.31
COL12A1-207ENST00000483888 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
COL12A1-207ENST00000483888 GOLGA6L4A6NEF3 574 aa13.07□□□□□ -0.32
COL12A1-207ENST00000483888 EIF4G2P78344 907 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL12A1-207ENST00000483888 UBE2Q2Q8WVN8 375 aa13.06□□□□□ -0.32
COL12A1-207ENST00000483888 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
COL12A1-207ENST00000483888 PDE4CQ08493 712 aa13.05□□□□□ -0.32
COL12A1-207ENST00000483888 NOC3LQ8WTT2 800 aaKnown RBP13.04□□□□□ -0.32
COL12A1-207ENST00000483888 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
COL12A1-207ENST00000483888 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
COL12A1-207ENST00000483888 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
COL12A1-207ENST00000483888 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
COL12A1-207ENST00000483888 NOM1Q5C9Z4 860 aaKnown RBP13.01□□□□□ -0.33
COL12A1-207ENST00000483888 TEX35Q5T0J7 233 aa13□□□□□ -0.33
COL12A1-207ENST00000483888 MTERF4Q7Z6M4 381 aaKnown RBP13□□□□□ -0.33
COL12A1-207ENST00000483888 FAM43AQ8N2R8 423 aa12.99□□□□□ -0.33
COL12A1-207ENST00000483888 HTATSF1O43719 755 aaKnown RBP12.98□□□□□ -0.33
COL12A1-207ENST00000483888 CALD1Q05682 793 aaKnown RBP12.98□□□□□ -0.33
COL12A1-207ENST00000483888 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
COL12A1-207ENST00000483888 TPM2P07951 284 aa12.96□□□□□ -0.33
COL12A1-207ENST00000483888 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
COL12A1-207ENST00000483888 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
COL12A1-207ENST00000483888 FRAT1Q92837 279 aaPredicted RBP12.95□□□□□ -0.34
COL12A1-207ENST00000483888 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
COL12A1-207ENST00000483888 CCER2I3L3R5 266 aa12.94□□□□□ -0.34
COL12A1-207ENST00000483888 PHF14O94880 888 aa12.94□□□□□ -0.34
COL12A1-207ENST00000483888 TAOK2Q9UL54 1235 aa12.93□□□□□ -0.34
COL12A1-207ENST00000483888 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
COL12A1-207ENST00000483888 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
COL12A1-207ENST00000483888 GPS2Q13227 327 aa12.92□□□□□ -0.34
COL12A1-207ENST00000483888 PATL2C9JE40 543 aaKnown RBP12.91□□□□□ -0.34
COL12A1-207ENST00000483888 MCCP23508 829 aa12.9□□□□□ -0.34
COL12A1-207ENST00000483888 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-207ENST00000483888 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
COL12A1-207ENST00000483888 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
COL12A1-207ENST00000483888 FGD1P98174 961 aa12.89□□□□□ -0.35
COL12A1-207ENST00000483888 SLC4A3P48751 1232 aa12.88□□□□□ -0.35
COL12A1-207ENST00000483888 CWC15Q9P013 229 aaKnown RBP12.88□□□□□ -0.35
COL12A1-207ENST00000483888 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
COL12A1-207ENST00000483888 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
COL12A1-207ENST00000483888 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
COL12A1-207ENST00000483888 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-207ENST00000483888 TPM4P67936 248 aa12.87□□□□□ -0.35
COL12A1-207ENST00000483888 KCNJ4P48050 445 aa12.87□□□□□ -0.35
COL12A1-207ENST00000483888 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-207ENST00000483888 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
COL12A1-207ENST00000483888 ZNF592Q92610 1267 aa12.85□□□□□ -0.35
COL12A1-207ENST00000483888 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
COL12A1-207ENST00000483888 MS4A1P11836 297 aa12.85□□□□□ -0.35
COL12A1-207ENST00000483888 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
COL12A1-207ENST00000483888 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms