RNA–Protein interactions for RNA: ENST00000482556.5

PREX1-202, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

TSL 2

Gene PREX1, Length 4,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-202ENST00000482556 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.28
PREX1-202ENST00000482556 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
PREX1-202ENST00000482556 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
PREX1-202ENST00000482556 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
PREX1-202ENST00000482556 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
PREX1-202ENST00000482556 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.28
PREX1-202ENST00000482556 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
PREX1-202ENST00000482556 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
PREX1-202ENST00000482556 PLEKHD1A6NEE1 506 aa16.74■□□□□ 0.27
PREX1-202ENST00000482556 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
PREX1-202ENST00000482556 SMARCA2P51531 1590 aa16.71■□□□□ 0.27
PREX1-202ENST00000482556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
PREX1-202ENST00000482556 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
PREX1-202ENST00000482556 CUX2O14529 1486 aa16.67■□□□□ 0.26
PREX1-202ENST00000482556 SLC24A1O60721 1099 aa16.67■□□□□ 0.26
PREX1-202ENST00000482556 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
PREX1-202ENST00000482556 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
PREX1-202ENST00000482556 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
PREX1-202ENST00000482556 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
PREX1-202ENST00000482556 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
PREX1-202ENST00000482556 ANP32AP39687 249 aaKnown RBP16.64■□□□□ 0.25
PREX1-202ENST00000482556 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
PREX1-202ENST00000482556 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
PREX1-202ENST00000482556 FHAD1B1AJZ9 1412 aa16.59■□□□□ 0.25
PREX1-202ENST00000482556 ANP32EQ9BTT0 268 aa16.59■□□□□ 0.25
PREX1-202ENST00000482556 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
PREX1-202ENST00000482556 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
PREX1-202ENST00000482556 KDM2AQ9Y2K7 1162 aa16.58■□□□□ 0.24
PREX1-202ENST00000482556 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
PREX1-202ENST00000482556 WDR43Q15061 677 aaKnown RBP eCLIP16.55■□□□□ 0.24
PREX1-202ENST00000482556 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
PREX1-202ENST00000482556 SALL2Q9Y467 1007 aaPredicted RBP16.55■□□□□ 0.24
PREX1-202ENST00000482556 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
PREX1-202ENST00000482556 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
PREX1-202ENST00000482556 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
PREX1-202ENST00000482556 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
PREX1-202ENST00000482556 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
PREX1-202ENST00000482556 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
PREX1-202ENST00000482556 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
PREX1-202ENST00000482556 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
PREX1-202ENST00000482556 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
PREX1-202ENST00000482556 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
PREX1-202ENST00000482556 KIF21BO75037 1637 aa16.47■□□□□ 0.23
PREX1-202ENST00000482556 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
PREX1-202ENST00000482556 NBR1Q14596 966 aa16.44■□□□□ 0.22
PREX1-202ENST00000482556 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
PREX1-202ENST00000482556 RBM19Q9Y4C8 960 aaKnown RBP16.42■□□□□ 0.22
PREX1-202ENST00000482556 HSPA5P11021 654 aaKnown RBP16.41■□□□□ 0.22
PREX1-202ENST00000482556 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
PREX1-202ENST00000482556 PDS5BQ9NTI5 1447 aa16.4■□□□□ 0.22
PREX1-202ENST00000482556 FHOD3Q2V2M9 1422 aa16.4■□□□□ 0.22
PREX1-202ENST00000482556 PPP4R2Q9NY27 417 aa16.38■□□□□ 0.21
PREX1-202ENST00000482556 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
PREX1-202ENST00000482556 FOXD1Q16676 465 aa16.37■□□□□ 0.21
PREX1-202ENST00000482556 B4GALNT3Q6L9W6 998 aa16.36■□□□□ 0.21
PREX1-202ENST00000482556 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
PREX1-202ENST00000482556 CARD11Q9BXL7 1154 aa16.35■□□□□ 0.21
PREX1-202ENST00000482556 CFAP53Q96M91 514 aa16.34■□□□□ 0.21
PREX1-202ENST00000482556 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
PREX1-202ENST00000482556 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
PREX1-202ENST00000482556 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
PREX1-202ENST00000482556 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
PREX1-202ENST00000482556 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
PREX1-202ENST00000482556 IGF1RP08069 1367 aa16.32■□□□□ 0.2
PREX1-202ENST00000482556 FMN1Q68DA7 1419 aa16.32■□□□□ 0.2
PREX1-202ENST00000482556 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
PREX1-202ENST00000482556 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
PREX1-202ENST00000482556 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
PREX1-202ENST00000482556 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
PREX1-202ENST00000482556 PHLDB1Q86UU1 1377 aa16.27■□□□□ 0.19
PREX1-202ENST00000482556 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
PREX1-202ENST00000482556 RRBP1Q9P2E9 1410 aaKnown RBP16.25■□□□□ 0.19
PREX1-202ENST00000482556 KANK1Q14678 1352 aa16.24■□□□□ 0.19
PREX1-202ENST00000482556 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
PREX1-202ENST00000482556 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
PREX1-202ENST00000482556 ARID4BQ4LE39 1312 aaPredicted RBP16.22■□□□□ 0.19
PREX1-202ENST00000482556 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
PREX1-202ENST00000482556 LRRC9Q6ZRR7 1453 aa16.19■□□□□ 0.18
PREX1-202ENST00000482556 FGD5Q6ZNL6 1462 aa16.18■□□□□ 0.18
PREX1-202ENST00000482556 TMF1P82094 1093 aa16.17■□□□□ 0.18
PREX1-202ENST00000482556 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
PREX1-202ENST00000482556 CCDC18Q5T9S5 1454 aa16.17■□□□□ 0.18
PREX1-202ENST00000482556 POGKQ9P215 609 aa16.17■□□□□ 0.18
PREX1-202ENST00000482556 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
PREX1-202ENST00000482556 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
PREX1-202ENST00000482556 PKD2Q13563 968 aa16.16■□□□□ 0.18
PREX1-202ENST00000482556 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
PREX1-202ENST00000482556 NOP58Q9Y2X3 529 aaKnown RBP16.16■□□□□ 0.18
PREX1-202ENST00000482556 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
PREX1-202ENST00000482556 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
PREX1-202ENST00000482556 ERICH6BQ5W0A0 696 aa16.15■□□□□ 0.18
PREX1-202ENST00000482556 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
PREX1-202ENST00000482556 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
PREX1-202ENST00000482556 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
PREX1-202ENST00000482556 RSPH4AQ5TD94 716 aa16.12■□□□□ 0.17
PREX1-202ENST00000482556 RAD54L2Q9Y4B4 1467 aa16.11■□□□□ 0.17
PREX1-202ENST00000482556 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
PREX1-202ENST00000482556 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
PREX1-202ENST00000482556 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
PREX1-202ENST00000482556 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 537.9 ms