RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
LIMK2-209ENST00000482270 TSPYL2Q9H2G4 693 aaPredicted RBP17.76■□□□□ 0.43
LIMK2-209ENST00000482270 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
LIMK2-209ENST00000482270 RASEFQ8IZ41 740 aa17.75■□□□□ 0.43
LIMK2-209ENST00000482270 EVX2Q03828 476 aa17.74■□□□□ 0.43
LIMK2-209ENST00000482270 SPOCK2Q92563 424 aa17.73■□□□□ 0.43
LIMK2-209ENST00000482270 SHROOM4Q9ULL8 1493 aa17.72■□□□□ 0.43
LIMK2-209ENST00000482270 NUBP1P53384 320 aa17.71■□□□□ 0.43
LIMK2-209ENST00000482270 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
LIMK2-209ENST00000482270 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
LIMK2-209ENST00000482270 FAM212AQ96EL1 285 aa17.63■□□□□ 0.41
LIMK2-209ENST00000482270 CC2D2AQ9P2K1 1620 aa17.62■□□□□ 0.41
LIMK2-209ENST00000482270 DCAF8Q5TAQ9 597 aa17.62■□□□□ 0.41
LIMK2-209ENST00000482270 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
LIMK2-209ENST00000482270 EIF4G1Q04637 1599 aaKnown RBP17.6■□□□□ 0.41
LIMK2-209ENST00000482270 PHF12Q96QT6 1004 aa17.56■□□□□ 0.4
LIMK2-209ENST00000482270 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
LIMK2-209ENST00000482270 SP7Q8TDD2 431 aaPredicted RBP17.48■□□□□ 0.39
LIMK2-209ENST00000482270 CECR2Q9BXF3 1484 aa17.48■□□□□ 0.39
LIMK2-209ENST00000482270 ZNF579Q8NAF0 562 aaKnown RBP17.47■□□□□ 0.39
LIMK2-209ENST00000482270 GSE1Q14687 1217 aa17.46■□□□□ 0.39
LIMK2-209ENST00000482270 PYGBP11216 843 aa17.44■□□□□ 0.38
LIMK2-209ENST00000482270 GABBR2O75899 941 aa17.34■□□□□ 0.37
LIMK2-209ENST00000482270 MAP3K13O43283 966 aa17.33■□□□□ 0.36
LIMK2-209ENST00000482270 KIF12Q96FN5 646 aa17.33■□□□□ 0.36
LIMK2-209ENST00000482270 GALR2O43603 387 aaPredicted RBP17.31■□□□□ 0.36
LIMK2-209ENST00000482270 MS4A3Q96HJ5 214 aa17.31■□□□□ 0.36
LIMK2-209ENST00000482270 PCDHB13Q9Y5F0 798 aa17.29■□□□□ 0.36
LIMK2-209ENST00000482270 PKD2Q13563 968 aa17.26■□□□□ 0.35
LIMK2-209ENST00000482270 ECM2O94769 699 aaPredicted RBP17.25■□□□□ 0.35
LIMK2-209ENST00000482270 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
LIMK2-209ENST00000482270 IFNL1Q8IU54 200 aa17.2■□□□□ 0.34
LIMK2-209ENST00000482270 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
LIMK2-209ENST00000482270 TRPC6Q9Y210 931 aa17.17■□□□□ 0.34
LIMK2-209ENST00000482270 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
LIMK2-209ENST00000482270 SMARCA4P51532 1647 aa17.14■□□□□ 0.33
LIMK2-209ENST00000482270 CHRM1P11229 460 aaPredicted RBP17.13■□□□□ 0.33
LIMK2-209ENST00000482270 CLCN6P51797 869 aa17.13■□□□□ 0.33
LIMK2-209ENST00000482270 RNF25Q96BH1 459 aaPredicted RBP17.1■□□□□ 0.33
LIMK2-209ENST00000482270 DCBLD2Q96PD2 775 aa17.1■□□□□ 0.33
LIMK2-209ENST00000482270 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
LIMK2-209ENST00000482270 SGIP1Q9BQI5 828 aa17.09■□□□□ 0.33
LIMK2-209ENST00000482270 RGL2O15211 777 aa17.08■□□□□ 0.32
LIMK2-209ENST00000482270 ZNF467Q7Z7K2 595 aaPredicted RBP17.08■□□□□ 0.32
LIMK2-209ENST00000482270 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
LIMK2-209ENST00000482270 BAZ1AQ9NRL2 1556 aaPredicted RBP17.02■□□□□ 0.32
LIMK2-209ENST00000482270 RIOK3O14730 519 aaKnown RBP17.02■□□□□ 0.32
LIMK2-209ENST00000482270 NCAPD3P42695 1498 aa17.01■□□□□ 0.31
LIMK2-209ENST00000482270 SMARCA2P51531 1590 aa17■□□□□ 0.31
LIMK2-209ENST00000482270 BMP2KQ9NSY1 1161 aaPredicted RBP17■□□□□ 0.31
LIMK2-209ENST00000482270 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
LIMK2-209ENST00000482270 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
LIMK2-209ENST00000482270 PSEN1P49768 467 aa16.96■□□□□ 0.31
LIMK2-209ENST00000482270 HMGXB3Q12766 1538 aa16.96■□□□□ 0.3
LIMK2-209ENST00000482270 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
LIMK2-209ENST00000482270 TTLL13PA6NNM8 815 aa16.95■□□□□ 0.3
LIMK2-209ENST00000482270 PDAP1Q13442 181 aaKnown RBP16.95■□□□□ 0.3
LIMK2-209ENST00000482270 TIE1P35590 1138 aa16.94■□□□□ 0.3
LIMK2-209ENST00000482270 ATMINO43313 823 aaPredicted RBP16.92■□□□□ 0.3
LIMK2-209ENST00000482270 ATN1P54259 1190 aaPredicted RBP16.92■□□□□ 0.3
LIMK2-209ENST00000482270 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
LIMK2-209ENST00000482270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-209ENST00000482270 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
LIMK2-209ENST00000482270 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
LIMK2-209ENST00000482270 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
LIMK2-209ENST00000482270 TRIM35Q9UPQ4 493 aa16.88■□□□□ 0.29
LIMK2-209ENST00000482270 ASTLQ6HA08 431 aaPredicted RBP16.87■□□□□ 0.29
LIMK2-209ENST00000482270 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
LIMK2-209ENST00000482270 WIZO95785 1651 aa16.83■□□□□ 0.28
LIMK2-209ENST00000482270 CABP2Q9NPB3 220 aa16.83■□□□□ 0.28
LIMK2-209ENST00000482270 STK25O00506 426 aa16.82■□□□□ 0.28
LIMK2-209ENST00000482270 GOLGA2Q08379 1002 aa16.81■□□□□ 0.28
LIMK2-209ENST00000482270 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
LIMK2-209ENST00000482270 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
LIMK2-209ENST00000482270 STK24Q9Y6E0 443 aa16.8■□□□□ 0.28
LIMK2-209ENST00000482270 NESP48681 1621 aa16.8■□□□□ 0.28
LIMK2-209ENST00000482270 ERCC6Q03468 1493 aa16.78■□□□□ 0.28
LIMK2-209ENST00000482270 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
LIMK2-209ENST00000482270 METRNQ9UJH8 293 aa16.73■□□□□ 0.27
LIMK2-209ENST00000482270 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
LIMK2-209ENST00000482270 SLC39A7Q92504 469 aa16.7■□□□□ 0.26
LIMK2-209ENST00000482270 EFCAB3Q8N7B9 438 aa16.69■□□□□ 0.26
LIMK2-209ENST00000482270 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
LIMK2-209ENST00000482270 SEC24BO95487 1268 aa16.66■□□□□ 0.26
LIMK2-209ENST00000482270 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
LIMK2-209ENST00000482270 C7P10643 843 aa16.63■□□□□ 0.25
LIMK2-209ENST00000482270 CUX2O14529 1486 aa16.62■□□□□ 0.25
LIMK2-209ENST00000482270 HS6ST3Q8IZP7 471 aa16.62■□□□□ 0.25
LIMK2-209ENST00000482270 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
LIMK2-209ENST00000482270 THOC2Q8NI27 1593 aaKnown RBP16.61■□□□□ 0.25
LIMK2-209ENST00000482270 COLQQ9Y215 455 aaPredicted RBP16.61■□□□□ 0.25
LIMK2-209ENST00000482270 PLCG2P16885 1265 aa16.59■□□□□ 0.25
LIMK2-209ENST00000482270 IER5LQ5T953 404 aa16.59■□□□□ 0.25
LIMK2-209ENST00000482270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■■■■□ 24.3
LIMK2-209ENST00000482270 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
LIMK2-209ENST00000482270 TOP2AP11388 1531 aaKnown RBP16.55■□□□□ 0.24
LIMK2-209ENST00000482270 IRX5P78411 483 aaPredicted RBP16.54■□□□□ 0.24
LIMK2-209ENST00000482270 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
LIMK2-209ENST00000482270 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
LIMK2-209ENST00000482270 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms