RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 PRG4Q92954 1404 aaPredicted RBP16.86■□□□□ 0.29
TMEM39A-207ENST00000482162 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
TMEM39A-207ENST00000482162 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.28
TMEM39A-207ENST00000482162 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
TMEM39A-207ENST00000482162 CUL7Q14999 1698 aa16.82■□□□□ 0.28
TMEM39A-207ENST00000482162 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
TMEM39A-207ENST00000482162 PTPRGP23470 1445 aa16.64■□□□□ 0.25
TMEM39A-207ENST00000482162 IQGAP2Q13576 1575 aa16.62■□□□□ 0.25
TMEM39A-207ENST00000482162 ADCY10Q96PN6 1610 aa16.62■□□□□ 0.25
TMEM39A-207ENST00000482162 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
TMEM39A-207ENST00000482162 CARMIL2Q6F5E8 1435 aa16.62■□□□□ 0.25
TMEM39A-207ENST00000482162 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
TMEM39A-207ENST00000482162 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
TMEM39A-207ENST00000482162 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
TMEM39A-207ENST00000482162 DISP1Q96F81 1524 aa16.6■□□□□ 0.25
TMEM39A-207ENST00000482162 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
TMEM39A-207ENST00000482162 ABCC10Q5T3U5 1492 aa16.59■□□□□ 0.25
TMEM39A-207ENST00000482162 UHRF1BP1LA0JNW5 1464 aa16.55■□□□□ 0.24
TMEM39A-207ENST00000482162 KIF13AQ9H1H9 1805 aa16.55■□□□□ 0.24
TMEM39A-207ENST00000482162 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
TMEM39A-207ENST00000482162 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
TMEM39A-207ENST00000482162 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
TMEM39A-207ENST00000482162 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
TMEM39A-207ENST00000482162 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
TMEM39A-207ENST00000482162 DIP2BQ9P265 1576 aa16.49■□□□□ 0.23
TMEM39A-207ENST00000482162 KIAA0556O60303 1618 aa16.47■□□□□ 0.23
TMEM39A-207ENST00000482162 KDM5BQ9UGL1 1544 aa16.46■□□□□ 0.23
TMEM39A-207ENST00000482162 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
TMEM39A-207ENST00000482162 PLB1Q6P1J6 1458 aa16.44■□□□□ 0.22
TMEM39A-207ENST00000482162 EEA1Q15075 1411 aa16.44■□□□□ 0.22
TMEM39A-207ENST00000482162 ASXL2Q76L83 1435 aa16.44■□□□□ 0.22
TMEM39A-207ENST00000482162 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
TMEM39A-207ENST00000482162 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
TMEM39A-207ENST00000482162 GLI2P10070 1586 aa16.4■□□□□ 0.22
TMEM39A-207ENST00000482162 ABCA8O94911 1581 aa16.36■□□□□ 0.21
TMEM39A-207ENST00000482162 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
TMEM39A-207ENST00000482162 ZCCHC11Q5TAX3 1644 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-207ENST00000482162 WDR7Q9Y4E6 1490 aa16.29■□□□□ 0.2
TMEM39A-207ENST00000482162 SAMD9Q5K651 1589 aa16.29■□□□□ 0.2
TMEM39A-207ENST00000482162 PPRC1Q5VV67 1664 aaKnown RBP16.28■□□□□ 0.2
TMEM39A-207ENST00000482162 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
TMEM39A-207ENST00000482162 P3H3Q8IVL6 736 aa16.27■□□□□ 0.2
TMEM39A-207ENST00000482162 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.19
TMEM39A-207ENST00000482162 FAM9AQ8IZU1 332 aaPredicted RBP16.26■□□□□ 0.19
TMEM39A-207ENST00000482162 KDM6BO15054 1643 aa16.26■□□□□ 0.19
TMEM39A-207ENST00000482162 ATP10BO94823 1461 aa16.25■□□□□ 0.19
TMEM39A-207ENST00000482162 COL17A1Q9UMD9 1497 aaPredicted RBP16.25■□□□□ 0.19
TMEM39A-207ENST00000482162 KIF21BO75037 1637 aa16.24■□□□□ 0.19
TMEM39A-207ENST00000482162 MAGI3Q5TCQ9 1506 aa16.21■□□□□ 0.19
TMEM39A-207ENST00000482162 TEX14Q8IWB6 1497 aa16.21■□□□□ 0.19
TMEM39A-207ENST00000482162 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
TMEM39A-207ENST00000482162 CD109Q6YHK3 1445 aa16.19■□□□□ 0.18
TMEM39A-207ENST00000482162 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
TMEM39A-207ENST00000482162 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
TMEM39A-207ENST00000482162 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
TMEM39A-207ENST00000482162 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
TMEM39A-207ENST00000482162 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.18
TMEM39A-207ENST00000482162 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.18
TMEM39A-207ENST00000482162 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
TMEM39A-207ENST00000482162 RANGAP1P46060 587 aaPredicted RBP16.11■□□□□ 0.17
TMEM39A-207ENST00000482162 UBTFP17480 764 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-207ENST00000482162 PHLDB1Q86UU1 1377 aa16.1■□□□□ 0.17
TMEM39A-207ENST00000482162 ARAP3Q8WWN8 1544 aa16.09■□□□□ 0.17
TMEM39A-207ENST00000482162 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.17
TMEM39A-207ENST00000482162 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
TMEM39A-207ENST00000482162 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
TMEM39A-207ENST00000482162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
TMEM39A-207ENST00000482162 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
TMEM39A-207ENST00000482162 NEO1Q92859 1461 aa16.03■□□□□ 0.16
TMEM39A-207ENST00000482162 FMN1Q68DA7 1419 aa16.02■□□□□ 0.15
TMEM39A-207ENST00000482162 EHMT2Q96KQ7 1210 aa15.99■□□□□ 0.15
TMEM39A-207ENST00000482162 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
TMEM39A-207ENST00000482162 CDK13Q14004 1512 aaKnown RBP15.95■□□□□ 0.14
TMEM39A-207ENST00000482162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.95■□□□□ 0.143e-7■□□□□ 11.1
TMEM39A-207ENST00000482162 RAPGEF3O95398 923 aa15.95■□□□□ 0.14
TMEM39A-207ENST00000482162 CDK11AQ9UQ88 783 aaPredicted RBP15.92■□□□□ 0.14
TMEM39A-207ENST00000482162 AKNAQ7Z591 1439 aa15.92■□□□□ 0.14
TMEM39A-207ENST00000482162 PLCH2O75038 1416 aa15.91■□□□□ 0.14
TMEM39A-207ENST00000482162 FANCAO15360 1455 aa15.91■□□□□ 0.14
TMEM39A-207ENST00000482162 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
TMEM39A-207ENST00000482162 FRMPD1Q5SYB0 1578 aa15.89■□□□□ 0.13
TMEM39A-207ENST00000482162 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
TMEM39A-207ENST00000482162 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.13
TMEM39A-207ENST00000482162 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-207ENST00000482162 DENND4BO75064 1496 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-207ENST00000482162 ATP1B4Q9UN42 357 aaPredicted RBP15.87■□□□□ 0.13
TMEM39A-207ENST00000482162 EFCAB2Q5VUJ9 269 aa15.84■□□□□ 0.13
TMEM39A-207ENST00000482162 CLIP1P30622 1438 aa15.84■□□□□ 0.13
TMEM39A-207ENST00000482162 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.13
TMEM39A-207ENST00000482162 RICTORQ6R327 1708 aa15.83■□□□□ 0.13
TMEM39A-207ENST00000482162 MAGI2Q86UL8 1455 aa15.82■□□□□ 0.12
TMEM39A-207ENST00000482162 ZMYM4Q5VZL5 1548 aa15.82■□□□□ 0.12
TMEM39A-207ENST00000482162 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
TMEM39A-207ENST00000482162 SCAPERQ9BY12 1400 aa15.81■□□□□ 0.12
TMEM39A-207ENST00000482162 KIF14Q15058 1648 aa15.8■□□□□ 0.12
TMEM39A-207ENST00000482162 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
TMEM39A-207ENST00000482162 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
TMEM39A-207ENST00000482162 ADAMTSL3P82987 1691 aa15.79■□□□□ 0.12
TMEM39A-207ENST00000482162 PCF11O94913 1555 aaKnown RBP15.79■□□□□ 0.12
TMEM39A-207ENST00000482162 POGZQ7Z3K3 1410 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms