RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 EFCAB5A4FU69 1503 aa18.2■□□□□ 0.5
GGPS1-205ENST00000482013 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
GGPS1-205ENST00000482013 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
GGPS1-205ENST00000482013 APLP2Q06481 763 aa18.15■□□□□ 0.5
GGPS1-205ENST00000482013 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
GGPS1-205ENST00000482013 SAMD9Q5K651 1589 aa18.08■□□□□ 0.49
GGPS1-205ENST00000482013 MAP3K1Q13233 1512 aa18.08■□□□□ 0.49
GGPS1-205ENST00000482013 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
GGPS1-205ENST00000482013 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
GGPS1-205ENST00000482013 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
GGPS1-205ENST00000482013 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
GGPS1-205ENST00000482013 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
GGPS1-205ENST00000482013 FMN1Q68DA7 1419 aa18.03■□□□□ 0.48
GGPS1-205ENST00000482013 UGGT2Q9NYU1 1516 aa18.01■□□□□ 0.47
GGPS1-205ENST00000482013 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
GGPS1-205ENST00000482013 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
GGPS1-205ENST00000482013 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
GGPS1-205ENST00000482013 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
GGPS1-205ENST00000482013 TIAM1Q13009 1591 aa17.96■□□□□ 0.46
GGPS1-205ENST00000482013 NUP160Q12769 1436 aa17.95■□□□□ 0.46
GGPS1-205ENST00000482013 PCF11O94913 1555 aaKnown RBP17.95■□□□□ 0.46
GGPS1-205ENST00000482013 P3H3Q8IVL6 736 aa17.94■□□□□ 0.46
GGPS1-205ENST00000482013 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
GGPS1-205ENST00000482013 CEP170Q5SW79 1584 aa17.92■□□□□ 0.46
GGPS1-205ENST00000482013 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
GGPS1-205ENST00000482013 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
GGPS1-205ENST00000482013 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
GGPS1-205ENST00000482013 HRCP23327 699 aa17.86■□□□□ 0.45
GGPS1-205ENST00000482013 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
GGPS1-205ENST00000482013 DISP1Q96F81 1524 aa17.85■□□□□ 0.45
GGPS1-205ENST00000482013 FBLN2P98095 1184 aa17.84■□□□□ 0.45
GGPS1-205ENST00000482013 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
GGPS1-205ENST00000482013 CHD1O14646 1710 aa17.82■□□□□ 0.44
GGPS1-205ENST00000482013 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
GGPS1-205ENST00000482013 CCDC18Q5T9S5 1454 aa17.82■□□□□ 0.44
GGPS1-205ENST00000482013 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
GGPS1-205ENST00000482013 JPH4Q96JJ6 628 aa17.8■□□□□ 0.44
GGPS1-205ENST00000482013 LRRIQ1Q96JM4 1722 aa17.78■□□□□ 0.44
GGPS1-205ENST00000482013 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.44
GGPS1-205ENST00000482013 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
GGPS1-205ENST00000482013 RAPGEF6Q8TEU7 1601 aa17.72■□□□□ 0.43
GGPS1-205ENST00000482013 SHROOM2Q13796 1616 aa17.72■□□□□ 0.43
GGPS1-205ENST00000482013 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
GGPS1-205ENST00000482013 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
GGPS1-205ENST00000482013 MTUS2Q5JR59 1369 aa17.7■□□□□ 0.42
GGPS1-205ENST00000482013 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
GGPS1-205ENST00000482013 SUPT6HQ7KZ85 1726 aaKnown RBP17.68■□□□□ 0.42
GGPS1-205ENST00000482013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.67■□□□□ 0.42
GGPS1-205ENST00000482013 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
GGPS1-205ENST00000482013 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
GGPS1-205ENST00000482013 NUP153P49790 1475 aaKnown RBP17.64■□□□□ 0.41
GGPS1-205ENST00000482013 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
GGPS1-205ENST00000482013 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
GGPS1-205ENST00000482013 ABCA8O94911 1581 aa17.62■□□□□ 0.41
GGPS1-205ENST00000482013 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
GGPS1-205ENST00000482013 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
GGPS1-205ENST00000482013 CDK11AQ9UQ88 783 aaPredicted RBP17.61■□□□□ 0.41
GGPS1-205ENST00000482013 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
GGPS1-205ENST00000482013 MAGI3Q5TCQ9 1506 aa17.6■□□□□ 0.41
GGPS1-205ENST00000482013 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
GGPS1-205ENST00000482013 PTPRGP23470 1445 aa17.58■□□□□ 0.41
GGPS1-205ENST00000482013 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
GGPS1-205ENST00000482013 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
GGPS1-205ENST00000482013 FGD6Q6ZV73 1430 aa17.57■□□□□ 0.4
GGPS1-205ENST00000482013 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
GGPS1-205ENST00000482013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
GGPS1-205ENST00000482013 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
GGPS1-205ENST00000482013 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
GGPS1-205ENST00000482013 ADCY10Q96PN6 1610 aa17.51■□□□□ 0.39
GGPS1-205ENST00000482013 TCOF1Q13428 1488 aaKnown RBP17.5■□□□□ 0.39
GGPS1-205ENST00000482013 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
GGPS1-205ENST00000482013 FAM50AQ14320 339 aaKnown RBP17.49■□□□□ 0.39
GGPS1-205ENST00000482013 ATP10BO94823 1461 aa17.49■□□□□ 0.39
GGPS1-205ENST00000482013 PTPN23Q9H3S7 1636 aa17.48■□□□□ 0.39
GGPS1-205ENST00000482013 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
GGPS1-205ENST00000482013 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
GGPS1-205ENST00000482013 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
GGPS1-205ENST00000482013 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
GGPS1-205ENST00000482013 ABCC2Q92887 1545 aa17.44■□□□□ 0.38
GGPS1-205ENST00000482013 ITSN2Q9NZM3 1697 aa17.43■□□□□ 0.38
GGPS1-205ENST00000482013 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
GGPS1-205ENST00000482013 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
GGPS1-205ENST00000482013 OSCARQ8IYS5 282 aa17.42■□□□□ 0.38
GGPS1-205ENST00000482013 KIF14Q15058 1648 aa17.4■□□□□ 0.38
GGPS1-205ENST00000482013 ITGAEP38570 1179 aa17.4■□□□□ 0.38
GGPS1-205ENST00000482013 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
GGPS1-205ENST00000482013 ABCC10Q5T3U5 1492 aa17.36■□□□□ 0.37
GGPS1-205ENST00000482013 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
GGPS1-205ENST00000482013 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
GGPS1-205ENST00000482013 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
GGPS1-205ENST00000482013 AKNAQ7Z591 1439 aa17.34■□□□□ 0.37
GGPS1-205ENST00000482013 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
GGPS1-205ENST00000482013 ACIN1Q9UKV3 1341 aaKnown RBP17.33■□□□□ 0.36
GGPS1-205ENST00000482013 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
GGPS1-205ENST00000482013 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
GGPS1-205ENST00000482013 PTPRKQ15262 1439 aa17.31■□□□□ 0.36
GGPS1-205ENST00000482013 ZCCHC11Q5TAX3 1644 aaKnown RBP17.3■□□□□ 0.36
GGPS1-205ENST00000482013 CFDP1Q9UEE9 299 aaPredicted RBP17.3■□□□□ 0.36
GGPS1-205ENST00000482013 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
GGPS1-205ENST00000482013 GCC2Q8IWJ2 1684 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms