RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 SUPT5HO00267 1087 aaKnown RBP9.96□□□□□ -0.82
TFE3-202ENST00000481606 RUSC2Q8N2Y8 1516 aa9.96□□□□□ -0.82
TFE3-202ENST00000481606 PRG4Q92954 1404 aaPredicted RBP9.95□□□□□ -0.82
TFE3-202ENST00000481606 DIP2BQ9P265 1576 aa9.9□□□□□ -0.82
TFE3-202ENST00000481606 MAPKBP1O60336 1514 aa9.9□□□□□ -0.82
TFE3-202ENST00000481606 ABCC10Q5T3U5 1492 aa9.9□□□□□ -0.83
TFE3-202ENST00000481606 ADCY10Q96PN6 1610 aa9.89□□□□□ -0.83
TFE3-202ENST00000481606 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
TFE3-202ENST00000481606 FAM69CQ0P6D2 419 aa9.87□□□□□ -0.83
TFE3-202ENST00000481606 KDM6BO15054 1643 aa9.86□□□□□ -0.83
TFE3-202ENST00000481606 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
TFE3-202ENST00000481606 CUL7Q14999 1698 aa9.84□□□□□ -0.83
TFE3-202ENST00000481606 NPM1P06748 294 aaKnown RBP eCLIP9.84□□□□□ -0.83
TFE3-202ENST00000481606 PLPPR3Q6T4P5 718 aa9.83□□□□□ -0.84
TFE3-202ENST00000481606 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
TFE3-202ENST00000481606 KIF27Q86VH2 1401 aa9.8□□□□□ -0.84
TFE3-202ENST00000481606 IGF1RP08069 1367 aa9.77□□□□□ -0.84
TFE3-202ENST00000481606 PTPRGP23470 1445 aa9.76□□□□□ -0.85
TFE3-202ENST00000481606 ILDR1Q86SU0 546 aaPredicted RBP9.76□□□□□ -0.85
TFE3-202ENST00000481606 PPRC1Q5VV67 1664 aaKnown RBP9.76□□□□□ -0.85
TFE3-202ENST00000481606 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
TFE3-202ENST00000481606 ABCC2Q92887 1545 aa9.76□□□□□ -0.85
TFE3-202ENST00000481606 KDM4FA0A1W2PPD8 638 aa9.75□□□□□ -0.85
TFE3-202ENST00000481606 IQGAP2Q13576 1575 aa9.75□□□□□ -0.85
TFE3-202ENST00000481606 TNIKQ9UKE5 1360 aa9.74□□□□□ -0.85
TFE3-202ENST00000481606 CARMIL2Q6F5E8 1435 aa9.73□□□□□ -0.85
TFE3-202ENST00000481606 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
TFE3-202ENST00000481606 GLI2P10070 1586 aa9.73□□□□□ -0.85
TFE3-202ENST00000481606 CARMIL1Q5VZK9 1371 aa9.73□□□□□ -0.85
TFE3-202ENST00000481606 PLB1Q6P1J6 1458 aa9.72□□□□□ -0.85
TFE3-202ENST00000481606 UHRF1BP1LA0JNW5 1464 aa9.71□□□□□ -0.86
TFE3-202ENST00000481606 ADGRL1O94910 1474 aa9.71□□□□□ -0.86
TFE3-202ENST00000481606 MAP3K4Q9Y6R4 1608 aa9.7□□□□□ -0.86
TFE3-202ENST00000481606 ZCCHC11Q5TAX3 1644 aaKnown RBP9.69□□□□□ -0.86
TFE3-202ENST00000481606 DISP1Q96F81 1524 aa9.69□□□□□ -0.86
TFE3-202ENST00000481606 UACAQ9BZF9 1416 aa9.69□□□□□ -0.86
TFE3-202ENST00000481606 KIAA0556O60303 1618 aa9.67□□□□□ -0.86
TFE3-202ENST00000481606 EPRSP07814 1512 aaKnown RBP9.67□□□□□ -0.86
TFE3-202ENST00000481606 UGGT2Q9NYU1 1516 aa9.66□□□□□ -0.86
TFE3-202ENST00000481606 KDM5BQ9UGL1 1544 aa9.66□□□□□ -0.86
TFE3-202ENST00000481606 TEX14Q8IWB6 1497 aa9.66□□□□□ -0.86
TFE3-202ENST00000481606 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
TFE3-202ENST00000481606 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
TFE3-202ENST00000481606 RAPGEF2Q9Y4G8 1499 aa9.63□□□□□ -0.87
TFE3-202ENST00000481606 CTTNBP2Q8WZ74 1663 aa9.63□□□□□ -0.87
TFE3-202ENST00000481606 WDR7Q9Y4E6 1490 aa9.62□□□□□ -0.87
TFE3-202ENST00000481606 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
TFE3-202ENST00000481606 ABCA8O94911 1581 aa9.58□□□□□ -0.88
TFE3-202ENST00000481606 KIF21BO75037 1637 aa9.57□□□□□ -0.88
TFE3-202ENST00000481606 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
TFE3-202ENST00000481606 GOLGA3Q08378 1498 aa9.56□□□□□ -0.88
TFE3-202ENST00000481606 FOXD1Q16676 465 aa9.56□□□□□ -0.88
TFE3-202ENST00000481606 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
TFE3-202ENST00000481606 KCNH8Q96L42 1107 aa9.52□□□□□ -0.89
TFE3-202ENST00000481606 PRXQ9BXM0 1461 aa9.49□□□□□ -0.89
TFE3-202ENST00000481606 ARID3CA6NKF2 412 aa9.49□□□□□ -0.89
TFE3-202ENST00000481606 ARAP3Q8WWN8 1544 aa9.49□□□□□ -0.89
TFE3-202ENST00000481606 ABCA9Q8IUA7 1624 aa9.49□□□□□ -0.89
TFE3-202ENST00000481606 ADAMTSL3P82987 1691 aa9.47□□□□□ -0.89
TFE3-202ENST00000481606 ATP10BO94823 1461 aa9.46□□□□□ -0.9
TFE3-202ENST00000481606 SAMD9Q5K651 1589 aa9.46□□□□□ -0.9
TFE3-202ENST00000481606 FRMPD1Q5SYB0 1578 aa9.46□□□□□ -0.9
TFE3-202ENST00000481606 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
TFE3-202ENST00000481606 PTPRMP28827 1452 aa9.45□□□□□ -0.9
TFE3-202ENST00000481606 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
TFE3-202ENST00000481606 BCORL1Q5H9F3 1711 aa9.45□□□□□ -0.9
TFE3-202ENST00000481606 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
TFE3-202ENST00000481606 NEO1Q92859 1461 aa9.43□□□□□ -0.9
TFE3-202ENST00000481606 ARHGEF40Q8TER5 1519 aa9.42□□□□□ -0.9
TFE3-202ENST00000481606 PHLDB1Q86UU1 1377 aa9.42□□□□□ -0.9
TFE3-202ENST00000481606 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
TFE3-202ENST00000481606 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
TFE3-202ENST00000481606 RAPGEF3O95398 923 aa9.41□□□□□ -0.9
TFE3-202ENST00000481606 FBXO41Q8TF61 875 aa9.41□□□□□ -0.9
TFE3-202ENST00000481606 RIMS1Q86UR5 1692 aaKnown RBP9.41□□□□□ -0.9
TFE3-202ENST00000481606 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.91
TFE3-202ENST00000481606 ARID4BQ4LE39 1312 aaPredicted RBP9.39□□□□□ -0.91
TFE3-202ENST00000481606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.39□□□□□ -0.91
TFE3-202ENST00000481606 HNRNPUL2Q1KMD3 747 aaKnown RBP9.39□□□□□ -0.91
TFE3-202ENST00000481606 LMTK3Q96Q04 1460 aa9.39□□□□□ -0.91
TFE3-202ENST00000481606 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
TFE3-202ENST00000481606 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
TFE3-202ENST00000481606 DENND4BO75064 1496 aaPredicted RBP9.37□□□□□ -0.91
TFE3-202ENST00000481606 FHOD3Q2V2M9 1422 aa9.37□□□□□ -0.91
TFE3-202ENST00000481606 TTC37Q6PGP7 1564 aa9.37□□□□□ -0.91
TFE3-202ENST00000481606 ZMYM4Q5VZL5 1548 aa9.36□□□□□ -0.91
TFE3-202ENST00000481606 FANCAO15360 1455 aa9.35□□□□□ -0.91
TFE3-202ENST00000481606 SIGLEC1Q9BZZ2 1709 aa9.35□□□□□ -0.91
TFE3-202ENST00000481606 ZFYVE16Q7Z3T8 1539 aa9.35□□□□□ -0.91
TFE3-202ENST00000481606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
TFE3-202ENST00000481606 AKNAQ7Z591 1439 aa9.34□□□□□ -0.91
TFE3-202ENST00000481606 RANGAP1P46060 587 aaPredicted RBP9.34□□□□□ -0.91
TFE3-202ENST00000481606 EFCAB5A4FU69 1503 aa9.34□□□□□ -0.91
TFE3-202ENST00000481606 FER1L4A9Z1Z3 1794 aa9.33□□□□□ -0.92
TFE3-202ENST00000481606 CSRNP3Q8WYN3 585 aa9.33□□□□□ -0.92
TFE3-202ENST00000481606 POGZQ7Z3K3 1410 aa9.32□□□□□ -0.92
TFE3-202ENST00000481606 YEATS2Q9ULM3 1422 aa9.32□□□□□ -0.92
TFE3-202ENST00000481606 CDK13Q14004 1512 aaKnown RBP9.31□□□□□ -0.92
TFE3-202ENST00000481606 HECW1Q76N89 1606 aa9.31□□□□□ -0.92
TFE3-202ENST00000481606 HSPA2P54652 639 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms