RNA–Protein interactions for RNA: ENST00000481278.5

TMCO1-206, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-206ENST00000481278 JPH4Q96JJ6 628 aa19.24■□□□□ 0.67
TMCO1-206ENST00000481278 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
TMCO1-206ENST00000481278 DIP2BQ9P265 1576 aa19.21■□□□□ 0.67
TMCO1-206ENST00000481278 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
TMCO1-206ENST00000481278 FAM69CQ0P6D2 419 aa19.16■□□□□ 0.66
TMCO1-206ENST00000481278 KDM4FA0A1W2PPD8 638 aa19.14■□□□□ 0.65
TMCO1-206ENST00000481278 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
TMCO1-206ENST00000481278 KIAA0586Q9BVV6 1533 aa19.08■□□□□ 0.64
TMCO1-206ENST00000481278 KDM6BO15054 1643 aa19.06■□□□□ 0.64
TMCO1-206ENST00000481278 IGF1RP08069 1367 aa19.05■□□□□ 0.64
TMCO1-206ENST00000481278 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
TMCO1-206ENST00000481278 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
TMCO1-206ENST00000481278 CUL7Q14999 1698 aa18.94■□□□□ 0.62
TMCO1-206ENST00000481278 ABCC2Q92887 1545 aa18.94■□□□□ 0.62
TMCO1-206ENST00000481278 TSPOAP1O95153 1857 aa18.93■□□□□ 0.62
TMCO1-206ENST00000481278 PTPRGP23470 1445 aa18.92■□□□□ 0.62
TMCO1-206ENST00000481278 GLI2P10070 1586 aa18.92■□□□□ 0.62
TMCO1-206ENST00000481278 COL17A1Q9UMD9 1497 aaPredicted RBP18.9■□□□□ 0.62
TMCO1-206ENST00000481278 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
TMCO1-206ENST00000481278 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
TMCO1-206ENST00000481278 ILDR1Q86SU0 546 aaPredicted RBP18.89■□□□□ 0.61
TMCO1-206ENST00000481278 UHRF1BP1LA0JNW5 1464 aa18.88■□□□□ 0.61
TMCO1-206ENST00000481278 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
TMCO1-206ENST00000481278 ADGRL1O94910 1474 aa18.85■□□□□ 0.61
TMCO1-206ENST00000481278 PLB1Q6P1J6 1458 aa18.85■□□□□ 0.61
TMCO1-206ENST00000481278 DISP1Q96F81 1524 aa18.84■□□□□ 0.61
TMCO1-206ENST00000481278 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
TMCO1-206ENST00000481278 EPRSP07814 1512 aaKnown RBP18.8■□□□□ 0.6
TMCO1-206ENST00000481278 KDM5BQ9UGL1 1544 aa18.8■□□□□ 0.6
TMCO1-206ENST00000481278 UACAQ9BZF9 1416 aa18.8■□□□□ 0.6
TMCO1-206ENST00000481278 IQGAP2Q13576 1575 aa18.8■□□□□ 0.6
TMCO1-206ENST00000481278 MAP3K4Q9Y6R4 1608 aa18.79■□□□□ 0.6
TMCO1-206ENST00000481278 CARMIL2Q6F5E8 1435 aa18.79■□□□□ 0.6
TMCO1-206ENST00000481278 UGGT2Q9NYU1 1516 aa18.74■□□□□ 0.59
TMCO1-206ENST00000481278 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
TMCO1-206ENST00000481278 HECW2Q9P2P5 1572 aa18.72■□□□□ 0.59
TMCO1-206ENST00000481278 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.58
TMCO1-206ENST00000481278 KIAA0556O60303 1618 aa18.67■□□□□ 0.58
TMCO1-206ENST00000481278 TEX14Q8IWB6 1497 aa18.67■□□□□ 0.58
TMCO1-206ENST00000481278 WDR7Q9Y4E6 1490 aa18.64■□□□□ 0.57
TMCO1-206ENST00000481278 RAPGEF2Q9Y4G8 1499 aa18.62■□□□□ 0.57
TMCO1-206ENST00000481278 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
TMCO1-206ENST00000481278 ABCA8O94911 1581 aa18.56■□□□□ 0.56
TMCO1-206ENST00000481278 CD109Q6YHK3 1445 aa18.53■□□□□ 0.56
TMCO1-206ENST00000481278 CFAP43Q8NDM7 1665 aa18.53■□□□□ 0.56
TMCO1-206ENST00000481278 KIF21BO75037 1637 aa18.47■□□□□ 0.55
TMCO1-206ENST00000481278 ARAP3Q8WWN8 1544 aa18.47■□□□□ 0.55
TMCO1-206ENST00000481278 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
TMCO1-206ENST00000481278 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
TMCO1-206ENST00000481278 PRXQ9BXM0 1461 aa18.42■□□□□ 0.54
TMCO1-206ENST00000481278 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
TMCO1-206ENST00000481278 ADAMTSL3P82987 1691 aa18.41■□□□□ 0.54
TMCO1-206ENST00000481278 ATP10BO94823 1461 aa18.39■□□□□ 0.54
TMCO1-206ENST00000481278 PTPRMP28827 1452 aa18.38■□□□□ 0.53
TMCO1-206ENST00000481278 FBXO41Q8TF61 875 aa18.37■□□□□ 0.53
TMCO1-206ENST00000481278 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
TMCO1-206ENST00000481278 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
TMCO1-206ENST00000481278 PHLDB1Q86UU1 1377 aa18.31■□□□□ 0.52
TMCO1-206ENST00000481278 LMTK3Q96Q04 1460 aa18.3■□□□□ 0.52
TMCO1-206ENST00000481278 NEO1Q92859 1461 aa18.29■□□□□ 0.52
TMCO1-206ENST00000481278 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
TMCO1-206ENST00000481278 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
TMCO1-206ENST00000481278 PCF11O94913 1555 aaKnown RBP18.27■□□□□ 0.52
TMCO1-206ENST00000481278 SAMD9Q5K651 1589 aa18.27■□□□□ 0.52
TMCO1-206ENST00000481278 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
TMCO1-206ENST00000481278 MADDQ8WXG6 1647 aa18.26■□□□□ 0.51
TMCO1-206ENST00000481278 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
TMCO1-206ENST00000481278 ARHGEF40Q8TER5 1519 aa18.22■□□□□ 0.51
TMCO1-206ENST00000481278 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
TMCO1-206ENST00000481278 P3H3Q8IVL6 736 aa18.21■□□□□ 0.51
TMCO1-206ENST00000481278 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
TMCO1-206ENST00000481278 FHOD3Q2V2M9 1422 aa18.17■□□□□ 0.5
TMCO1-206ENST00000481278 RICTORQ6R327 1708 aa18.17■□□□□ 0.5
TMCO1-206ENST00000481278 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
TMCO1-206ENST00000481278 ZMYM4Q5VZL5 1548 aa18.13■□□□□ 0.49
TMCO1-206ENST00000481278 DENND4BO75064 1496 aaPredicted RBP18.13■□□□□ 0.49
TMCO1-206ENST00000481278 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
TMCO1-206ENST00000481278 YEATS2Q9ULM3 1422 aa18.11■□□□□ 0.49
TMCO1-206ENST00000481278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.493e-8■■■□□ 16.7
TMCO1-206ENST00000481278 HSPA2P54652 639 aa18.09■□□□□ 0.49
TMCO1-206ENST00000481278 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.49
TMCO1-206ENST00000481278 FANCAO15360 1455 aa18.08■□□□□ 0.49
TMCO1-206ENST00000481278 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.49
TMCO1-206ENST00000481278 CSRNP3Q8WYN3 585 aa18.05■□□□□ 0.48
TMCO1-206ENST00000481278 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
TMCO1-206ENST00000481278 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
TMCO1-206ENST00000481278 CFAP74Q9C0B2 1584 aa18.03■□□□□ 0.48
TMCO1-206ENST00000481278 HECW1Q76N89 1606 aa18.02■□□□□ 0.48
TMCO1-206ENST00000481278 EFCAB5A4FU69 1503 aa18.02■□□□□ 0.47
TMCO1-206ENST00000481278 ARHGEF12Q9NZN5 1544 aa18.01■□□□□ 0.47
TMCO1-206ENST00000481278 POGZQ7Z3K3 1410 aa18■□□□□ 0.47
TMCO1-206ENST00000481278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
TMCO1-206ENST00000481278 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
TMCO1-206ENST00000481278 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
TMCO1-206ENST00000481278 CERKQ8TCT0 537 aa18■□□□□ 0.47
TMCO1-206ENST00000481278 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
TMCO1-206ENST00000481278 CDK13Q14004 1512 aaKnown RBP17.97■□□□□ 0.47
TMCO1-206ENST00000481278 PLCH2O75038 1416 aa17.97■□□□□ 0.47
TMCO1-206ENST00000481278 FER1L4A9Z1Z3 1794 aa17.95■□□□□ 0.46
TMCO1-206ENST00000481278 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms