RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 CTTNBP2Q8WZ74 1663 aa35.18■■■■□ 3.22
TMED4-205ENST00000481238 APLP2Q06481 763 aa35.18■■■■□ 3.22
TMED4-205ENST00000481238 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
TMED4-205ENST00000481238 EFCAB5A4FU69 1503 aa35.08■■■■□ 3.21
TMED4-205ENST00000481238 SNAPC4Q5SXM2 1469 aa35.06■■■■□ 3.2
TMED4-205ENST00000481238 TTBK1Q5TCY1 1321 aaPredicted RBP35.04■■■■□ 3.2
TMED4-205ENST00000481238 MAGI1Q96QZ7 1491 aaPredicted RBP35.01■■■■□ 3.19
TMED4-205ENST00000481238 P3H3Q8IVL6 736 aa34.97■■■■□ 3.19
TMED4-205ENST00000481238 FHOD3Q2V2M9 1422 aa34.92■■■■□ 3.18
TMED4-205ENST00000481238 GRIN2AQ12879 1464 aa34.9■■■■□ 3.18
TMED4-205ENST00000481238 SAMD9Q5K651 1589 aa34.9■■■■□ 3.18
TMED4-205ENST00000481238 SYNJ2O15056 1496 aa34.88■■■■□ 3.17
TMED4-205ENST00000481238 IQGAP2Q13576 1575 aa34.85■■■■□ 3.17
TMED4-205ENST00000481238 CHMP7Q8WUX9 453 aaPredicted RBP34.85■■■■□ 3.17
TMED4-205ENST00000481238 MAP3K1Q13233 1512 aa34.83■■■■□ 3.17
TMED4-205ENST00000481238 HRCP23327 699 aa34.82■■■■□ 3.17
TMED4-205ENST00000481238 KANK4Q5T7N3 995 aaPredicted RBP34.82■■■■□ 3.16
TMED4-205ENST00000481238 FMN1Q68DA7 1419 aa34.82■■■■□ 3.16
TMED4-205ENST00000481238 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
TMED4-205ENST00000481238 CASKIN1Q8WXD9 1431 aa34.76■■■■□ 3.16
TMED4-205ENST00000481238 PCF11O94913 1555 aaKnown RBP34.74■■■■□ 3.15
TMED4-205ENST00000481238 UGGT2Q9NYU1 1516 aa34.74■■■■□ 3.15
TMED4-205ENST00000481238 FYCO1Q9BQS8 1478 aa34.73■■■■□ 3.15
TMED4-205ENST00000481238 TIAM1Q13009 1591 aa34.71■■■■□ 3.15
TMED4-205ENST00000481238 FBLN2P98095 1184 aa34.7■■■■□ 3.15
TMED4-205ENST00000481238 NUP160Q12769 1436 aa34.65■■■■□ 3.14
TMED4-205ENST00000481238 CEP170Q5SW79 1584 aa34.65■■■■□ 3.14
TMED4-205ENST00000481238 ATP1B4Q9UN42 357 aaPredicted RBP34.63■■■■□ 3.13
TMED4-205ENST00000481238 LRRC9Q6ZRR7 1453 aa34.6■■■■□ 3.13
TMED4-205ENST00000481238 CFAP43Q8NDM7 1665 aa34.57■■■■□ 3.12
TMED4-205ENST00000481238 DISP1Q96F81 1524 aa34.54■■■■□ 3.12
TMED4-205ENST00000481238 KIAA0556O60303 1618 aa34.5■■■■□ 3.11
TMED4-205ENST00000481238 JPH4Q96JJ6 628 aa34.47■■■■□ 3.11
TMED4-205ENST00000481238 RRBP1Q9P2E9 1410 aaKnown RBP34.46■■■■□ 3.11
TMED4-205ENST00000481238 CARMIL2Q6F5E8 1435 aa34.37■■■■□ 3.09
TMED4-205ENST00000481238 HNRNPUL2Q1KMD3 747 aaKnown RBP34.36■■■■□ 3.09
TMED4-205ENST00000481238 HECW1Q76N89 1606 aa34.36■■■■□ 3.09
TMED4-205ENST00000481238 CCDC18Q5T9S5 1454 aa34.36■■■■□ 3.09
TMED4-205ENST00000481238 ZEB1P37275 1124 aaPredicted RBP34.35■■■■□ 3.09
TMED4-205ENST00000481238 CCNB3Q8WWL7 1395 aa34.34■■■■□ 3.09
TMED4-205ENST00000481238 LRRIQ1Q96JM4 1722 aa34.34■■■■□ 3.09
TMED4-205ENST00000481238 CHD1O14646 1710 aa34.33■■■■□ 3.09
TMED4-205ENST00000481238 MTUS2Q5JR59 1369 aa34.3■■■■□ 3.08
TMED4-205ENST00000481238 PHLDB1Q86UU1 1377 aa34.3■■■■□ 3.08
TMED4-205ENST00000481238 EPRSP07814 1512 aaKnown RBP34.27■■■■□ 3.08
TMED4-205ENST00000481238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.26■■■■□ 3.08
TMED4-205ENST00000481238 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.06
TMED4-205ENST00000481238 CCER1Q8TC90 406 aaPredicted RBP34.19■■■■□ 3.06
TMED4-205ENST00000481238 RAPGEF6Q8TEU7 1601 aa34.19■■■■□ 3.06
TMED4-205ENST00000481238 PRG4Q92954 1404 aaPredicted RBP34.17■■■■□ 3.06
TMED4-205ENST00000481238 NUP153P49790 1475 aaKnown RBP34.15■■■■□ 3.06
TMED4-205ENST00000481238 CDK13Q14004 1512 aaKnown RBP34.14■■■■□ 3.06
TMED4-205ENST00000481238 MAGI3Q5TCQ9 1506 aa34.13■■■■□ 3.05
TMED4-205ENST00000481238 NCOA2Q15596 1464 aa34.11■■■■□ 3.05
TMED4-205ENST00000481238 PLB1Q6P1J6 1458 aa34.09■■■■□ 3.05
TMED4-205ENST00000481238 SHROOM2Q13796 1616 aa34.09■■■■□ 3.05
TMED4-205ENST00000481238 SUPT6HQ7KZ85 1726 aaKnown RBP34.09■■■■□ 3.05
TMED4-205ENST00000481238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.09■■■■□ 3.056e-7■■□□□ 11.8
TMED4-205ENST00000481238 ARID3CA6NKF2 412 aa34.06■■■■□ 3.04
TMED4-205ENST00000481238 ARHGEF11O15085 1522 aa34.05■■■■□ 3.04
TMED4-205ENST00000481238 FGD6Q6ZV73 1430 aa34.03■■■■□ 3.04
TMED4-205ENST00000481238 FAM50AQ14320 339 aaKnown RBP34.03■■■■□ 3.04
TMED4-205ENST00000481238 CDK11AQ9UQ88 783 aaPredicted RBP34.03■■■■□ 3.04
TMED4-205ENST00000481238 PTPRGP23470 1445 aa34.02■■■■□ 3.04
TMED4-205ENST00000481238 ABCA8O94911 1581 aa34.01■■■■□ 3.04
TMED4-205ENST00000481238 MYOM3Q5VTT5 1437 aa34.01■■■■□ 3.03
TMED4-205ENST00000481238 CLASP1Q7Z460 1538 aa34■■■■□ 3.03
TMED4-205ENST00000481238 ITGAEP38570 1179 aa33.98■■■■□ 3.03
TMED4-205ENST00000481238 TROQ12816 1431 aaPredicted RBP33.87■■■■□ 3.01
TMED4-205ENST00000481238 ATP10BO94823 1461 aa33.85■■■■□ 3.01
TMED4-205ENST00000481238 ERCC6L2Q5T890 1561 aa33.84■■■■□ 3.01
TMED4-205ENST00000481238 MIA2Q96PC5 1412 aa33.83■■■■□ 3.01
TMED4-205ENST00000481238 UACAQ9BZF9 1416 aa33.82■■■■□ 3
TMED4-205ENST00000481238 TCOF1Q13428 1488 aaKnown RBP33.79■■■■□ 3
TMED4-205ENST00000481238 PTPN23Q9H3S7 1636 aa33.79■■■■□ 3
TMED4-205ENST00000481238 PLEKHD1A6NEE1 506 aa33.77■■■■□ 3
TMED4-205ENST00000481238 SETD5Q9C0A6 1442 aa33.76■■■■□ 3
TMED4-205ENST00000481238 RAB3GAP2Q9H2M9 1393 aa33.72■■■□□ 2.99
TMED4-205ENST00000481238 DHX57Q6P158 1386 aaKnown RBP33.7■■■□□ 2.99
TMED4-205ENST00000481238 ADCY10Q96PN6 1610 aa33.7■■■□□ 2.99
TMED4-205ENST00000481238 OSCARQ8IYS5 282 aa33.67■■■□□ 2.98
TMED4-205ENST00000481238 PTPRKQ15262 1439 aa33.67■■■□□ 2.98
TMED4-205ENST00000481238 CLSPNQ9HAW4 1339 aa33.67■■■□□ 2.98
TMED4-205ENST00000481238 ABCC2Q92887 1545 aa33.66■■■□□ 2.98
TMED4-205ENST00000481238 KIF14Q15058 1648 aa33.61■■■□□ 2.97
TMED4-205ENST00000481238 UHRF1BP1LA0JNW5 1464 aa33.6■■■□□ 2.97
TMED4-205ENST00000481238 GPATCH8Q9UKJ3 1502 aaKnown RBP33.6■■■□□ 2.97
TMED4-205ENST00000481238 HFM1A2PYH4 1435 aa33.56■■■□□ 2.96
TMED4-205ENST00000481238 ABCC10Q5T3U5 1492 aa33.55■■■□□ 2.96
TMED4-205ENST00000481238 CFDP1Q9UEE9 299 aaPredicted RBP33.55■■■□□ 2.96
TMED4-205ENST00000481238 ITSN2Q9NZM3 1697 aa33.53■■■□□ 2.96
TMED4-205ENST00000481238 ZNF644Q9H582 1327 aaPredicted RBP33.5■■■□□ 2.95
TMED4-205ENST00000481238 NAIPQ13075 1403 aa33.48■■■□□ 2.95
TMED4-205ENST00000481238 KDM5BQ9UGL1 1544 aa33.46■■■□□ 2.95
TMED4-205ENST00000481238 AKNAQ7Z591 1439 aa33.45■■■□□ 2.94
TMED4-205ENST00000481238 DAPK1P53355 1430 aa33.44■■■□□ 2.94
TMED4-205ENST00000481238 ABCC5O15440 1437 aa33.43■■■□□ 2.94
TMED4-205ENST00000481238 CAMSAP2Q08AD1 1489 aa33.42■■■□□ 2.94
TMED4-205ENST00000481238 CHIC2Q9UKJ5 165 aa33.42■■■□□ 2.94
TMED4-205ENST00000481238 DNMT1P26358 1616 aaKnown RBP33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms