RNA–Protein interactions for RNA: ENST00000481004.1

LINC02040-201, Transcript of long intergenic non-protein coding RNA 2040, humanhuman

TSL 5 BASIC

Gene LINC02040, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02040-201ENST00000481004 SMARCA4P51532 1647 aa10.87□□□□□ -0.67
LINC02040-201ENST00000481004 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC02040-201ENST00000481004 HAX1O00165 279 aa10.83□□□□□ -0.68
LINC02040-201ENST00000481004 NCAPD3P42695 1498 aa10.82□□□□□ -0.68
LINC02040-201ENST00000481004 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
LINC02040-201ENST00000481004 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
LINC02040-201ENST00000481004 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
LINC02040-201ENST00000481004 MROH2BQ7Z745 1585 aa10.77□□□□□ -0.68
LINC02040-201ENST00000481004 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.68
LINC02040-201ENST00000481004 HMGXB3Q12766 1538 aa10.77□□□□□ -0.69
LINC02040-201ENST00000481004 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
LINC02040-201ENST00000481004 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
LINC02040-201ENST00000481004 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
LINC02040-201ENST00000481004 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
LINC02040-201ENST00000481004 CD44P16070 742 aaKnown RBP10.71□□□□□ -0.69
LINC02040-201ENST00000481004 IFNLR1Q8IU57 520 aaPredicted RBP10.7□□□□□ -0.7
LINC02040-201ENST00000481004 BAZ1BQ9UIG0 1483 aaKnown RBP10.69□□□□□ -0.7
LINC02040-201ENST00000481004 EVX2Q03828 476 aa10.69□□□□□ -0.7
LINC02040-201ENST00000481004 NESP48681 1621 aa10.69□□□□□ -0.7
LINC02040-201ENST00000481004 WIZO95785 1651 aa10.67□□□□□ -0.7
LINC02040-201ENST00000481004 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
LINC02040-201ENST00000481004 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
LINC02040-201ENST00000481004 NUBP1P53384 320 aa10.63□□□□□ -0.71
LINC02040-201ENST00000481004 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
LINC02040-201ENST00000481004 TSPYL2Q9H2G4 693 aaPredicted RBP10.62□□□□□ -0.71
LINC02040-201ENST00000481004 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
LINC02040-201ENST00000481004 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
LINC02040-201ENST00000481004 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
LINC02040-201ENST00000481004 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
LINC02040-201ENST00000481004 GSE1Q14687 1217 aa10.57□□□□□ -0.72
LINC02040-201ENST00000481004 DCAF8Q5TAQ9 597 aa10.57□□□□□ -0.72
LINC02040-201ENST00000481004 LHX8Q68G74 356 aa10.56□□□□□ -0.72
LINC02040-201ENST00000481004 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
LINC02040-201ENST00000481004 RSF1Q96T23 1441 aaPredicted RBP10.56□□□□□ -0.72
LINC02040-201ENST00000481004 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
LINC02040-201ENST00000481004 CUX2O14529 1486 aa10.55□□□□□ -0.72
LINC02040-201ENST00000481004 CLCN6P51797 869 aa10.54□□□□□ -0.72
LINC02040-201ENST00000481004 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
LINC02040-201ENST00000481004 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
LINC02040-201ENST00000481004 PLSCR2Q9NRY7 297 aa10.51□□□□□ -0.73
LINC02040-201ENST00000481004 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
LINC02040-201ENST00000481004 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
LINC02040-201ENST00000481004 CADPSQ9ULU8 1353 aa10.47□□□□□ -0.73
LINC02040-201ENST00000481004 GABBR2O75899 941 aa10.45□□□□□ -0.74
LINC02040-201ENST00000481004 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
LINC02040-201ENST00000481004 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
LINC02040-201ENST00000481004 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
LINC02040-201ENST00000481004 PYGBP11216 843 aa10.42□□□□□ -0.74
LINC02040-201ENST00000481004 DNAJC5Q9H3Z4 198 aa10.42□□□□□ -0.74
LINC02040-201ENST00000481004 WDR62O43379 1518 aa10.41□□□□□ -0.74
LINC02040-201ENST00000481004 CFTRP13569 1480 aa10.41□□□□□ -0.74
LINC02040-201ENST00000481004 MRC2Q9UBG0 1479 aa10.4□□□□□ -0.74
LINC02040-201ENST00000481004 MAP3K13O43283 966 aa10.39□□□□□ -0.75
LINC02040-201ENST00000481004 SGIP1Q9BQI5 828 aa10.39□□□□□ -0.75
LINC02040-201ENST00000481004 PCDHB13Q9Y5F0 798 aa10.39□□□□□ -0.75
LINC02040-201ENST00000481004 CHRM1P11229 460 aaPredicted RBP10.38□□□□□ -0.75
LINC02040-201ENST00000481004 MS4A3Q96HJ5 214 aa10.38□□□□□ -0.75
LINC02040-201ENST00000481004 PRDM2Q13029 1718 aa10.38□□□□□ -0.75
LINC02040-201ENST00000481004 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
LINC02040-201ENST00000481004 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
LINC02040-201ENST00000481004 CEP164Q9UPV0 1460 aa10.36□□□□□ -0.75
LINC02040-201ENST00000481004 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
LINC02040-201ENST00000481004 URB2Q14146 1524 aaKnown RBP10.34□□□□□ -0.75
LINC02040-201ENST00000481004 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
LINC02040-201ENST00000481004 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
LINC02040-201ENST00000481004 ECM2O94769 699 aaPredicted RBP10.31□□□□□ -0.76
LINC02040-201ENST00000481004 PKD2Q13563 968 aa10.3□□□□□ -0.76
LINC02040-201ENST00000481004 IFNL1Q8IU54 200 aa10.3□□□□□ -0.76
LINC02040-201ENST00000481004 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
LINC02040-201ENST00000481004 TIE1P35590 1138 aa10.26□□□□□ -0.77
LINC02040-201ENST00000481004 AMER1Q5JTC6 1135 aaPredicted RBP10.26□□□□□ -0.77
LINC02040-201ENST00000481004 TAOK2Q9UL54 1235 aa10.24□□□□□ -0.77
LINC02040-201ENST00000481004 RIOK3O14730 519 aaKnown RBP10.23□□□□□ -0.77
LINC02040-201ENST00000481004 PDAP1Q13442 181 aaKnown RBP10.22□□□□□ -0.77
LINC02040-201ENST00000481004 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
LINC02040-201ENST00000481004 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
LINC02040-201ENST00000481004 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
LINC02040-201ENST00000481004 ASTLQ6HA08 431 aaPredicted RBP10.2□□□□□ -0.78
LINC02040-201ENST00000481004 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
LINC02040-201ENST00000481004 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
LINC02040-201ENST00000481004 ZNF608Q9ULD9 1512 aaPredicted RBP10.2□□□□□ -0.78
LINC02040-201ENST00000481004 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
LINC02040-201ENST00000481004 ATMINO43313 823 aaPredicted RBP10.19□□□□□ -0.78
LINC02040-201ENST00000481004 PSEN1P49768 467 aa10.19□□□□□ -0.78
LINC02040-201ENST00000481004 RNF25Q96BH1 459 aaPredicted RBP10.19□□□□□ -0.78
LINC02040-201ENST00000481004 DNMBPQ6XZF7 1577 aa10.18□□□□□ -0.78
LINC02040-201ENST00000481004 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
LINC02040-201ENST00000481004 RGL2O15211 777 aa10.17□□□□□ -0.78
LINC02040-201ENST00000481004 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
LINC02040-201ENST00000481004 ATN1P54259 1190 aaPredicted RBP10.16□□□□□ -0.78
LINC02040-201ENST00000481004 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
LINC02040-201ENST00000481004 GOLGA2Q08379 1002 aa10.14□□□□□ -0.79
LINC02040-201ENST00000481004 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
LINC02040-201ENST00000481004 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
LINC02040-201ENST00000481004 TRIM35Q9UPQ4 493 aa10.13□□□□□ -0.79
LINC02040-201ENST00000481004 POLA1P09884 1462 aaPredicted RBP10.12□□□□□ -0.79
LINC02040-201ENST00000481004 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
LINC02040-201ENST00000481004 CUX1P39880 1505 aa10.12□□□□□ -0.79
LINC02040-201ENST00000481004 ABCC8Q09428 1581 aa10.11□□□□□ -0.79
LINC02040-201ENST00000481004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms