RNA–Protein interactions for RNA: ENST00000480833.1

SCUBE1-207, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 282 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-207ENST00000480833 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
SCUBE1-207ENST00000480833 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
SCUBE1-207ENST00000480833 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
SCUBE1-207ENST00000480833 KIAA0586Q9BVV6 1533 aa18.28■□□□□ 0.52
SCUBE1-207ENST00000480833 CUL7Q14999 1698 aa18.26■□□□□ 0.51
SCUBE1-207ENST00000480833 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
SCUBE1-207ENST00000480833 FAM69CQ0P6D2 419 aa18.13■□□□□ 0.49
SCUBE1-207ENST00000480833 ABCC10Q5T3U5 1492 aa18.13■□□□□ 0.49
SCUBE1-207ENST00000480833 KDM4FA0A1W2PPD8 638 aa18.12■□□□□ 0.49
SCUBE1-207ENST00000480833 RAPGEF2Q9Y4G8 1499 aa18.12■□□□□ 0.49
SCUBE1-207ENST00000480833 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
SCUBE1-207ENST00000480833 PTPRGP23470 1445 aa18.11■□□□□ 0.49
SCUBE1-207ENST00000480833 ADCY10Q96PN6 1610 aa18.1■□□□□ 0.49
SCUBE1-207ENST00000480833 IQGAP2Q13576 1575 aa18.08■□□□□ 0.48
SCUBE1-207ENST00000480833 ILDR1Q86SU0 546 aaPredicted RBP18.07■□□□□ 0.48
SCUBE1-207ENST00000480833 TNIKQ9UKE5 1360 aa18.06■□□□□ 0.48
SCUBE1-207ENST00000480833 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
SCUBE1-207ENST00000480833 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
SCUBE1-207ENST00000480833 KIF13AQ9H1H9 1805 aa18.05■□□□□ 0.48
SCUBE1-207ENST00000480833 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
SCUBE1-207ENST00000480833 PRXQ9BXM0 1461 aa18■□□□□ 0.47
SCUBE1-207ENST00000480833 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
SCUBE1-207ENST00000480833 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
SCUBE1-207ENST00000480833 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
SCUBE1-207ENST00000480833 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
SCUBE1-207ENST00000480833 ABCC2Q92887 1545 aa17.94■□□□□ 0.46
SCUBE1-207ENST00000480833 UHRF1BP1LA0JNW5 1464 aa17.93■□□□□ 0.46
SCUBE1-207ENST00000480833 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
SCUBE1-207ENST00000480833 ASXL2Q76L83 1435 aa17.9■□□□□ 0.46
SCUBE1-207ENST00000480833 KDM6BO15054 1643 aa17.88■□□□□ 0.45
SCUBE1-207ENST00000480833 CTTNBP2Q8WZ74 1663 aa17.88■□□□□ 0.45
SCUBE1-207ENST00000480833 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
SCUBE1-207ENST00000480833 KDM5BQ9UGL1 1544 aa17.86■□□□□ 0.45
SCUBE1-207ENST00000480833 PLB1Q6P1J6 1458 aa17.85■□□□□ 0.45
SCUBE1-207ENST00000480833 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
SCUBE1-207ENST00000480833 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
SCUBE1-207ENST00000480833 GOLGA3Q08378 1498 aa17.83■□□□□ 0.45
SCUBE1-207ENST00000480833 CHIC1Q5VXU3 224 aa17.8■□□□□ 0.44
SCUBE1-207ENST00000480833 ZCCHC11Q5TAX3 1644 aaKnown RBP17.79■□□□□ 0.44
SCUBE1-207ENST00000480833 EEA1Q15075 1411 aa17.78■□□□□ 0.44
SCUBE1-207ENST00000480833 GLI2P10070 1586 aa17.78■□□□□ 0.44
SCUBE1-207ENST00000480833 EPRSP07814 1512 aaKnown RBP17.77■□□□□ 0.44
SCUBE1-207ENST00000480833 ABCA8O94911 1581 aa17.77■□□□□ 0.44
SCUBE1-207ENST00000480833 RANGAP1P46060 587 aaPredicted RBP17.76■□□□□ 0.43
SCUBE1-207ENST00000480833 ARID3CA6NKF2 412 aa17.75■□□□□ 0.43
SCUBE1-207ENST00000480833 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
SCUBE1-207ENST00000480833 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
SCUBE1-207ENST00000480833 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
SCUBE1-207ENST00000480833 WDR7Q9Y4E6 1490 aa17.71■□□□□ 0.43
SCUBE1-207ENST00000480833 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
SCUBE1-207ENST00000480833 EHMT2Q96KQ7 1210 aa17.69■□□□□ 0.42
SCUBE1-207ENST00000480833 ATP10BO94823 1461 aa17.69■□□□□ 0.42
SCUBE1-207ENST00000480833 MAP3K4Q9Y6R4 1608 aa17.69■□□□□ 0.42
SCUBE1-207ENST00000480833 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
SCUBE1-207ENST00000480833 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
SCUBE1-207ENST00000480833 CD109Q6YHK3 1445 aa17.63■□□□□ 0.41
SCUBE1-207ENST00000480833 KIF21BO75037 1637 aa17.62■□□□□ 0.41
SCUBE1-207ENST00000480833 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
SCUBE1-207ENST00000480833 TEX14Q8IWB6 1497 aa17.61■□□□□ 0.41
SCUBE1-207ENST00000480833 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
SCUBE1-207ENST00000480833 UBTFP17480 764 aaKnown RBP17.6■□□□□ 0.41
SCUBE1-207ENST00000480833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
SCUBE1-207ENST00000480833 HNRNPUL2Q1KMD3 747 aaKnown RBP17.58■□□□□ 0.4
SCUBE1-207ENST00000480833 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.4
SCUBE1-207ENST00000480833 MAGI3Q5TCQ9 1506 aa17.57■□□□□ 0.4
SCUBE1-207ENST00000480833 NUP153P49790 1475 aaKnown RBP17.57■□□□□ 0.4
SCUBE1-207ENST00000480833 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
SCUBE1-207ENST00000480833 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
SCUBE1-207ENST00000480833 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
SCUBE1-207ENST00000480833 ABCA9Q8IUA7 1624 aa17.47■□□□□ 0.39
SCUBE1-207ENST00000480833 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
SCUBE1-207ENST00000480833 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
SCUBE1-207ENST00000480833 RAPGEF3O95398 923 aa17.44■□□□□ 0.38
SCUBE1-207ENST00000480833 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
SCUBE1-207ENST00000480833 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
SCUBE1-207ENST00000480833 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
SCUBE1-207ENST00000480833 FMN1Q68DA7 1419 aa17.38■□□□□ 0.37
SCUBE1-207ENST00000480833 NEO1Q92859 1461 aa17.37■□□□□ 0.37
SCUBE1-207ENST00000480833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCUBE1-207ENST00000480833 TTC37Q6PGP7 1564 aa17.32■□□□□ 0.36
SCUBE1-207ENST00000480833 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
SCUBE1-207ENST00000480833 FANCAO15360 1455 aa17.31■□□□□ 0.36
SCUBE1-207ENST00000480833 FRMPD1Q5SYB0 1578 aa17.3■□□□□ 0.36
SCUBE1-207ENST00000480833 PTPRMP28827 1452 aa17.3■□□□□ 0.36
SCUBE1-207ENST00000480833 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
SCUBE1-207ENST00000480833 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
SCUBE1-207ENST00000480833 DENND4BO75064 1496 aaPredicted RBP17.28■□□□□ 0.36
SCUBE1-207ENST00000480833 PLCH2O75038 1416 aa17.28■□□□□ 0.36
SCUBE1-207ENST00000480833 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.35
SCUBE1-207ENST00000480833 TROQ12816 1431 aaPredicted RBP17.25■□□□□ 0.35
SCUBE1-207ENST00000480833 CASKIN1Q8WXD9 1431 aa17.25■□□□□ 0.35
SCUBE1-207ENST00000480833 EFCAB2Q5VUJ9 269 aa17.24■□□□□ 0.35
SCUBE1-207ENST00000480833 CLIP1P30622 1438 aa17.23■□□□□ 0.35
SCUBE1-207ENST00000480833 KIF14Q15058 1648 aa17.23■□□□□ 0.35
SCUBE1-207ENST00000480833 SCAPERQ9BY12 1400 aa17.22■□□□□ 0.35
SCUBE1-207ENST00000480833 RICTORQ6R327 1708 aa17.22■□□□□ 0.35
SCUBE1-207ENST00000480833 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
SCUBE1-207ENST00000480833 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
SCUBE1-207ENST00000480833 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
SCUBE1-207ENST00000480833 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms