RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
TMEM40-207ENST00000480698 ADCY10Q96PN6 1610 aa17.82■□□□□ 0.44
TMEM40-207ENST00000480698 HECW2Q9P2P5 1572 aa17.78■□□□□ 0.44
TMEM40-207ENST00000480698 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
TMEM40-207ENST00000480698 ADGRL1O94910 1474 aa17.76■□□□□ 0.43
TMEM40-207ENST00000480698 RUSC2Q8N2Y8 1516 aa17.76■□□□□ 0.43
TMEM40-207ENST00000480698 JPH4Q96JJ6 628 aa17.72■□□□□ 0.43
TMEM40-207ENST00000480698 PPRC1Q5VV67 1664 aaKnown RBP17.71■□□□□ 0.42
TMEM40-207ENST00000480698 TSPOAP1O95153 1857 aa17.7■□□□□ 0.42
TMEM40-207ENST00000480698 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
TMEM40-207ENST00000480698 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
TMEM40-207ENST00000480698 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
TMEM40-207ENST00000480698 GLI2P10070 1586 aa17.64■□□□□ 0.41
TMEM40-207ENST00000480698 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
TMEM40-207ENST00000480698 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
TMEM40-207ENST00000480698 FBXO41Q8TF61 875 aa17.57■□□□□ 0.4
TMEM40-207ENST00000480698 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
TMEM40-207ENST00000480698 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
TMEM40-207ENST00000480698 MAP3K4Q9Y6R4 1608 aa17.5■□□□□ 0.39
TMEM40-207ENST00000480698 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
TMEM40-207ENST00000480698 ASXL2Q76L83 1435 aa17.49■□□□□ 0.39
TMEM40-207ENST00000480698 UHRF1BP1LA0JNW5 1464 aa17.45■□□□□ 0.38
TMEM40-207ENST00000480698 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
TMEM40-207ENST00000480698 PTPRGP23470 1445 aa17.42■□□□□ 0.38
TMEM40-207ENST00000480698 TEX14Q8IWB6 1497 aa17.41■□□□□ 0.38
TMEM40-207ENST00000480698 CUL7Q14999 1698 aa17.41■□□□□ 0.38
TMEM40-207ENST00000480698 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
TMEM40-207ENST00000480698 TNIKQ9UKE5 1360 aa17.36■□□□□ 0.37
TMEM40-207ENST00000480698 UACAQ9BZF9 1416 aa17.31■□□□□ 0.36
TMEM40-207ENST00000480698 IGF1RP08069 1367 aa17.31■□□□□ 0.36
TMEM40-207ENST00000480698 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
TMEM40-207ENST00000480698 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
TMEM40-207ENST00000480698 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
TMEM40-207ENST00000480698 MAGI3Q5TCQ9 1506 aa17.27■□□□□ 0.36
TMEM40-207ENST00000480698 DISP1Q96F81 1524 aa17.27■□□□□ 0.36
TMEM40-207ENST00000480698 KIF21BO75037 1637 aa17.27■□□□□ 0.36
TMEM40-207ENST00000480698 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
TMEM40-207ENST00000480698 IQGAP2Q13576 1575 aa17.23■□□□□ 0.35
TMEM40-207ENST00000480698 PTPRMP28827 1452 aa17.23■□□□□ 0.35
TMEM40-207ENST00000480698 WDR7Q9Y4E6 1490 aa17.23■□□□□ 0.35
TMEM40-207ENST00000480698 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.35
TMEM40-207ENST00000480698 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
TMEM40-207ENST00000480698 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
TMEM40-207ENST00000480698 SOCS7O14512 581 aa17.17■□□□□ 0.34
TMEM40-207ENST00000480698 UGGT2Q9NYU1 1516 aa17.16■□□□□ 0.34
TMEM40-207ENST00000480698 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
TMEM40-207ENST00000480698 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
TMEM40-207ENST00000480698 ILDR2Q71H61 639 aa17.14■□□□□ 0.33
TMEM40-207ENST00000480698 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
TMEM40-207ENST00000480698 KIAA0556O60303 1618 aa17.13■□□□□ 0.33
TMEM40-207ENST00000480698 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
TMEM40-207ENST00000480698 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
TMEM40-207ENST00000480698 MADDQ8WXG6 1647 aa17.07■□□□□ 0.32
TMEM40-207ENST00000480698 ABCA8O94911 1581 aa17.04■□□□□ 0.32
TMEM40-207ENST00000480698 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
TMEM40-207ENST00000480698 FRMPD1Q5SYB0 1578 aa17.01■□□□□ 0.31
TMEM40-207ENST00000480698 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
TMEM40-207ENST00000480698 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
TMEM40-207ENST00000480698 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.31
TMEM40-207ENST00000480698 SPATA31D1Q6ZQQ2 1576 aa16.96■□□□□ 0.31
TMEM40-207ENST00000480698 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
TMEM40-207ENST00000480698 ARHGEF40Q8TER5 1519 aa16.93■□□□□ 0.3
TMEM40-207ENST00000480698 NEO1Q92859 1461 aa16.93■□□□□ 0.3
TMEM40-207ENST00000480698 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
TMEM40-207ENST00000480698 HSPA2P54652 639 aa16.91■□□□□ 0.3
TMEM40-207ENST00000480698 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
TMEM40-207ENST00000480698 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
TMEM40-207ENST00000480698 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
TMEM40-207ENST00000480698 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
TMEM40-207ENST00000480698 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
TMEM40-207ENST00000480698 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
TMEM40-207ENST00000480698 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
TMEM40-207ENST00000480698 ATP10BO94823 1461 aa16.84■□□□□ 0.29
TMEM40-207ENST00000480698 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
TMEM40-207ENST00000480698 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
TMEM40-207ENST00000480698 FHOD3Q2V2M9 1422 aa16.8■□□□□ 0.28
TMEM40-207ENST00000480698 STRCQ7RTU9 1775 aa16.8■□□□□ 0.28
TMEM40-207ENST00000480698 FANCAO15360 1455 aa16.78■□□□□ 0.28
TMEM40-207ENST00000480698 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
TMEM40-207ENST00000480698 ARID4BQ4LE39 1312 aaPredicted RBP16.77■□□□□ 0.28
TMEM40-207ENST00000480698 YEATS2Q9ULM3 1422 aa16.77■□□□□ 0.27
TMEM40-207ENST00000480698 FER1L4A9Z1Z3 1794 aa16.75■□□□□ 0.27
TMEM40-207ENST00000480698 POGZQ7Z3K3 1410 aa16.75■□□□□ 0.27
TMEM40-207ENST00000480698 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
TMEM40-207ENST00000480698 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
TMEM40-207ENST00000480698 ARHGEF12Q9NZN5 1544 aa16.73■□□□□ 0.27
TMEM40-207ENST00000480698 LTBP4Q8N2S1 1624 aa16.73■□□□□ 0.27
TMEM40-207ENST00000480698 AKNAQ7Z591 1439 aa16.72■□□□□ 0.27
TMEM40-207ENST00000480698 EFCAB5A4FU69 1503 aa16.71■□□□□ 0.27
TMEM40-207ENST00000480698 MAGI2Q86UL8 1455 aa16.71■□□□□ 0.27
TMEM40-207ENST00000480698 ZFYVE16Q7Z3T8 1539 aa16.7■□□□□ 0.26
TMEM40-207ENST00000480698 PTPRTO14522 1441 aa16.69■□□□□ 0.26
TMEM40-207ENST00000480698 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
TMEM40-207ENST00000480698 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
TMEM40-207ENST00000480698 RAPGEF6Q8TEU7 1601 aa16.65■□□□□ 0.26
TMEM40-207ENST00000480698 SAMD9Q5K651 1589 aa16.64■□□□□ 0.25
TMEM40-207ENST00000480698 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
TMEM40-207ENST00000480698 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
TMEM40-207ENST00000480698 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
TMEM40-207ENST00000480698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms