RNA–Protein interactions for RNA: ENST00000480617.1

CNKSR1-205, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-205ENST00000480617 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
CNKSR1-205ENST00000480617 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CNKSR1-205ENST00000480617 ADAMTS12P58397 1594 aa13.58□□□□□ -0.23
CNKSR1-205ENST00000480617 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
CNKSR1-205ENST00000480617 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
CNKSR1-205ENST00000480617 DIP2BQ9P265 1576 aa13.51□□□□□ -0.25
CNKSR1-205ENST00000480617 KDM6BO15054 1643 aa13.49□□□□□ -0.25
CNKSR1-205ENST00000480617 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
CNKSR1-205ENST00000480617 TOP2BQ02880 1626 aa13.46□□□□□ -0.26
CNKSR1-205ENST00000480617 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.26
CNKSR1-205ENST00000480617 BIVM-ERCC5R4GMW8 1640 aa13.43□□□□□ -0.26
CNKSR1-205ENST00000480617 RUSC2Q8N2Y8 1516 aa13.4□□□□□ -0.26
CNKSR1-205ENST00000480617 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
CNKSR1-205ENST00000480617 PTPRGP23470 1445 aa13.38□□□□□ -0.27
CNKSR1-205ENST00000480617 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
CNKSR1-205ENST00000480617 IGF1RP08069 1367 aa13.37□□□□□ -0.27
CNKSR1-205ENST00000480617 TSPOAP1O95153 1857 aa13.37□□□□□ -0.27
CNKSR1-205ENST00000480617 COL17A1Q9UMD9 1497 aaPredicted RBP13.36□□□□□ -0.27
CNKSR1-205ENST00000480617 GLI2P10070 1586 aa13.34□□□□□ -0.27
CNKSR1-205ENST00000480617 PLB1Q6P1J6 1458 aa13.34□□□□□ -0.27
CNKSR1-205ENST00000480617 ASXL2Q76L83 1435 aa13.32□□□□□ -0.28
CNKSR1-205ENST00000480617 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
CNKSR1-205ENST00000480617 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
CNKSR1-205ENST00000480617 PPRC1Q5VV67 1664 aaKnown RBP13.31□□□□□ -0.28
CNKSR1-205ENST00000480617 HECW2Q9P2P5 1572 aa13.3□□□□□ -0.28
CNKSR1-205ENST00000480617 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
CNKSR1-205ENST00000480617 FBXO41Q8TF61 875 aa13.29□□□□□ -0.28
CNKSR1-205ENST00000480617 UHRF1BP1LA0JNW5 1464 aa13.28□□□□□ -0.28
CNKSR1-205ENST00000480617 CARMIL2Q6F5E8 1435 aa13.26□□□□□ -0.29
CNKSR1-205ENST00000480617 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
CNKSR1-205ENST00000480617 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
CNKSR1-205ENST00000480617 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
CNKSR1-205ENST00000480617 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
CNKSR1-205ENST00000480617 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
CNKSR1-205ENST00000480617 CARMIL1Q5VZK9 1371 aa13.21□□□□□ -0.29
CNKSR1-205ENST00000480617 TEX14Q8IWB6 1497 aa13.21□□□□□ -0.3
CNKSR1-205ENST00000480617 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
CNKSR1-205ENST00000480617 CUL7Q14999 1698 aa13.18□□□□□ -0.3
CNKSR1-205ENST00000480617 DISP1Q96F81 1524 aa13.17□□□□□ -0.3
CNKSR1-205ENST00000480617 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
CNKSR1-205ENST00000480617 IQGAP2Q13576 1575 aa13.11□□□□□ -0.31
CNKSR1-205ENST00000480617 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
CNKSR1-205ENST00000480617 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
CNKSR1-205ENST00000480617 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-205ENST00000480617 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.31
CNKSR1-205ENST00000480617 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
CNKSR1-205ENST00000480617 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
CNKSR1-205ENST00000480617 PTPRMP28827 1452 aa13.04□□□□□ -0.32
CNKSR1-205ENST00000480617 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
CNKSR1-205ENST00000480617 CFAP43Q8NDM7 1665 aa13.01□□□□□ -0.33
CNKSR1-205ENST00000480617 KIAA0556O60303 1618 aa13□□□□□ -0.33
CNKSR1-205ENST00000480617 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
CNKSR1-205ENST00000480617 ADAMTSL3P82987 1691 aa12.99□□□□□ -0.33
CNKSR1-205ENST00000480617 KIF21BO75037 1637 aa12.98□□□□□ -0.33
CNKSR1-205ENST00000480617 ABCA8O94911 1581 aa12.97□□□□□ -0.33
CNKSR1-205ENST00000480617 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
CNKSR1-205ENST00000480617 RAPGEF3O95398 923 aa12.96□□□□□ -0.33
CNKSR1-205ENST00000480617 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
CNKSR1-205ENST00000480617 PCF11O94913 1555 aaKnown RBP12.93□□□□□ -0.34
CNKSR1-205ENST00000480617 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
CNKSR1-205ENST00000480617 SOCS7O14512 581 aa12.92□□□□□ -0.34
CNKSR1-205ENST00000480617 ATP10BO94823 1461 aa12.91□□□□□ -0.34
CNKSR1-205ENST00000480617 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
CNKSR1-205ENST00000480617 HSPA2P54652 639 aa12.9□□□□□ -0.34
CNKSR1-205ENST00000480617 ARID4BQ4LE39 1312 aaPredicted RBP12.89□□□□□ -0.35
CNKSR1-205ENST00000480617 NEO1Q92859 1461 aa12.89□□□□□ -0.35
CNKSR1-205ENST00000480617 BCORL1Q5H9F3 1711 aa12.88□□□□□ -0.35
CNKSR1-205ENST00000480617 FAM9AQ8IZU1 332 aaPredicted RBP12.86□□□□□ -0.35
CNKSR1-205ENST00000480617 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
CNKSR1-205ENST00000480617 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
CNKSR1-205ENST00000480617 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
CNKSR1-205ENST00000480617 DISP3Q9P2K9 1392 aa12.81□□□□□ -0.36
CNKSR1-205ENST00000480617 FRMPD1Q5SYB0 1578 aa12.81□□□□□ -0.36
CNKSR1-205ENST00000480617 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
CNKSR1-205ENST00000480617 PRXQ9BXM0 1461 aa12.8□□□□□ -0.36
CNKSR1-205ENST00000480617 PLPPR3Q6T4P5 718 aa12.8□□□□□ -0.36
CNKSR1-205ENST00000480617 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
CNKSR1-205ENST00000480617 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
CNKSR1-205ENST00000480617 CTTNBP2Q8WZ74 1663 aa12.78□□□□□ -0.36
CNKSR1-205ENST00000480617 POGZQ7Z3K3 1410 aa12.78□□□□□ -0.36
CNKSR1-205ENST00000480617 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
CNKSR1-205ENST00000480617 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
CNKSR1-205ENST00000480617 RIMS1Q86UR5 1692 aaKnown RBP12.76□□□□□ -0.37
CNKSR1-205ENST00000480617 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
CNKSR1-205ENST00000480617 YEATS2Q9ULM3 1422 aa12.74□□□□□ -0.37
CNKSR1-205ENST00000480617 PLEKHD1A6NEE1 506 aa12.74□□□□□ -0.37
CNKSR1-205ENST00000480617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
CNKSR1-205ENST00000480617 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-205ENST00000480617 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
CNKSR1-205ENST00000480617 FANCAO15360 1455 aa12.72□□□□□ -0.37
CNKSR1-205ENST00000480617 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
CNKSR1-205ENST00000480617 MLECQ14165 292 aa12.71□□□□□ -0.37
CNKSR1-205ENST00000480617 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
CNKSR1-205ENST00000480617 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
CNKSR1-205ENST00000480617 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
CNKSR1-205ENST00000480617 SIGLEC1Q9BZZ2 1709 aa12.69□□□□□ -0.38
CNKSR1-205ENST00000480617 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
CNKSR1-205ENST00000480617 RAPGEF6Q8TEU7 1601 aa12.68□□□□□ -0.38
CNKSR1-205ENST00000480617 SAMD9Q5K651 1589 aa12.67□□□□□ -0.38
CNKSR1-205ENST00000480617 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms