RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 DMRT2Q9Y5R5 561 aa18.92■□□□□ 0.62
SMURF1-204ENST00000480055 ADAMTS12P58397 1594 aa18.89■□□□□ 0.61
SMURF1-204ENST00000480055 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.61
SMURF1-204ENST00000480055 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
SMURF1-204ENST00000480055 GRIN2AQ12879 1464 aa18.86■□□□□ 0.61
SMURF1-204ENST00000480055 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
SMURF1-204ENST00000480055 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
SMURF1-204ENST00000480055 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
SMURF1-204ENST00000480055 NUP160Q12769 1436 aa18.81■□□□□ 0.6
SMURF1-204ENST00000480055 TOP2BQ02880 1626 aa18.77■□□□□ 0.6
SMURF1-204ENST00000480055 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
SMURF1-204ENST00000480055 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
SMURF1-204ENST00000480055 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
SMURF1-204ENST00000480055 FHAD1B1AJZ9 1412 aa18.71■□□□□ 0.59
SMURF1-204ENST00000480055 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
SMURF1-204ENST00000480055 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
SMURF1-204ENST00000480055 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
SMURF1-204ENST00000480055 PRG4Q92954 1404 aaPredicted RBP18.59■□□□□ 0.57
SMURF1-204ENST00000480055 DIP2BQ9P265 1576 aa18.56■□□□□ 0.56
SMURF1-204ENST00000480055 MAPKBP1O60336 1514 aa18.56■□□□□ 0.56
SMURF1-204ENST00000480055 ADCY10Q96PN6 1610 aa18.54■□□□□ 0.56
SMURF1-204ENST00000480055 ABCC10Q5T3U5 1492 aa18.53■□□□□ 0.56
SMURF1-204ENST00000480055 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
SMURF1-204ENST00000480055 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
SMURF1-204ENST00000480055 JPH4Q96JJ6 628 aa18.48■□□□□ 0.55
SMURF1-204ENST00000480055 KDM6BO15054 1643 aa18.47■□□□□ 0.55
SMURF1-204ENST00000480055 CUL7Q14999 1698 aa18.44■□□□□ 0.54
SMURF1-204ENST00000480055 FAM69CQ0P6D2 419 aa18.42■□□□□ 0.54
SMURF1-204ENST00000480055 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
SMURF1-204ENST00000480055 KIAA0586Q9BVV6 1533 aa18.39■□□□□ 0.54
SMURF1-204ENST00000480055 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMURF1-204ENST00000480055 PPRC1Q5VV67 1664 aaKnown RBP18.34■□□□□ 0.53
SMURF1-204ENST00000480055 IGF1RP08069 1367 aa18.29■□□□□ 0.52
SMURF1-204ENST00000480055 KDM4FA0A1W2PPD8 638 aa18.28■□□□□ 0.52
SMURF1-204ENST00000480055 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
SMURF1-204ENST00000480055 GLI2P10070 1586 aa18.27■□□□□ 0.52
SMURF1-204ENST00000480055 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
SMURF1-204ENST00000480055 ABCC2Q92887 1545 aa18.26■□□□□ 0.51
SMURF1-204ENST00000480055 DCAF8L1A6NGE4 600 aa18.25■□□□□ 0.51
SMURF1-204ENST00000480055 IQGAP2Q13576 1575 aa18.24■□□□□ 0.51
SMURF1-204ENST00000480055 PTPRGP23470 1445 aa18.23■□□□□ 0.51
SMURF1-204ENST00000480055 MAP3K4Q9Y6R4 1608 aa18.2■□□□□ 0.5
SMURF1-204ENST00000480055 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
SMURF1-204ENST00000480055 PLB1Q6P1J6 1458 aa18.2■□□□□ 0.5
SMURF1-204ENST00000480055 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
SMURF1-204ENST00000480055 CARMIL2Q6F5E8 1435 aa18.19■□□□□ 0.5
SMURF1-204ENST00000480055 ASXL2Q76L83 1435 aa18.19■□□□□ 0.5
SMURF1-204ENST00000480055 CARMIL1Q5VZK9 1371 aa18.16■□□□□ 0.5
SMURF1-204ENST00000480055 ADGRL1O94910 1474 aa18.15■□□□□ 0.5
SMURF1-204ENST00000480055 ZCCHC11Q5TAX3 1644 aaKnown RBP18.15■□□□□ 0.5
SMURF1-204ENST00000480055 DISP1Q96F81 1524 aa18.13■□□□□ 0.49
SMURF1-204ENST00000480055 UACAQ9BZF9 1416 aa18.12■□□□□ 0.49
SMURF1-204ENST00000480055 KDM5BQ9UGL1 1544 aa18.12■□□□□ 0.49
SMURF1-204ENST00000480055 EPRSP07814 1512 aaKnown RBP18.11■□□□□ 0.49
SMURF1-204ENST00000480055 KIAA0556O60303 1618 aa18.1■□□□□ 0.49
SMURF1-204ENST00000480055 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
SMURF1-204ENST00000480055 COL17A1Q9UMD9 1497 aaPredicted RBP18.08■□□□□ 0.49
SMURF1-204ENST00000480055 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.49
SMURF1-204ENST00000480055 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
SMURF1-204ENST00000480055 CTTNBP2Q8WZ74 1663 aa18.06■□□□□ 0.48
SMURF1-204ENST00000480055 HECW2Q9P2P5 1572 aa18.05■□□□□ 0.48
SMURF1-204ENST00000480055 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
SMURF1-204ENST00000480055 CFAP43Q8NDM7 1665 aa18.03■□□□□ 0.48
SMURF1-204ENST00000480055 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
SMURF1-204ENST00000480055 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
SMURF1-204ENST00000480055 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
SMURF1-204ENST00000480055 ABCA8O94911 1581 aa17.93■□□□□ 0.46
SMURF1-204ENST00000480055 KIF21BO75037 1637 aa17.92■□□□□ 0.46
SMURF1-204ENST00000480055 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
SMURF1-204ENST00000480055 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
SMURF1-204ENST00000480055 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
SMURF1-204ENST00000480055 ABCA9Q8IUA7 1624 aa17.8■□□□□ 0.44
SMURF1-204ENST00000480055 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
SMURF1-204ENST00000480055 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
SMURF1-204ENST00000480055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMURF1-204ENST00000480055 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
SMURF1-204ENST00000480055 KCNH8Q96L42 1107 aa17.74■□□□□ 0.43
SMURF1-204ENST00000480055 BCORL1Q5H9F3 1711 aa17.72■□□□□ 0.43
SMURF1-204ENST00000480055 SAMD9Q5K651 1589 aa17.71■□□□□ 0.43
SMURF1-204ENST00000480055 FRMPD1Q5SYB0 1578 aa17.71■□□□□ 0.43
SMURF1-204ENST00000480055 RAPGEF6Q8TEU7 1601 aa17.7■□□□□ 0.42
SMURF1-204ENST00000480055 ATP10BO94823 1461 aa17.69■□□□□ 0.42
SMURF1-204ENST00000480055 PTPRMP28827 1452 aa17.69■□□□□ 0.42
SMURF1-204ENST00000480055 MADDQ8WXG6 1647 aa17.69■□□□□ 0.42
SMURF1-204ENST00000480055 PHLDB1Q86UU1 1377 aa17.67■□□□□ 0.42
SMURF1-204ENST00000480055 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
SMURF1-204ENST00000480055 NEO1Q92859 1461 aa17.66■□□□□ 0.42
SMURF1-204ENST00000480055 RICTORQ6R327 1708 aa17.65■□□□□ 0.42
SMURF1-204ENST00000480055 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
SMURF1-204ENST00000480055 PCF11O94913 1555 aaKnown RBP17.63■□□□□ 0.41
SMURF1-204ENST00000480055 RIMS1Q86UR5 1692 aaKnown RBP17.63■□□□□ 0.41
SMURF1-204ENST00000480055 FBXO41Q8TF61 875 aa17.62■□□□□ 0.41
SMURF1-204ENST00000480055 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
SMURF1-204ENST00000480055 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
SMURF1-204ENST00000480055 CFAP74Q9C0B2 1584 aa17.59■□□□□ 0.41
SMURF1-204ENST00000480055 ARID3CA6NKF2 412 aa17.59■□□□□ 0.41
SMURF1-204ENST00000480055 LMTK3Q96Q04 1460 aa17.58■□□□□ 0.41
SMURF1-204ENST00000480055 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
SMURF1-204ENST00000480055 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
SMURF1-204ENST00000480055 SIGLEC1Q9BZZ2 1709 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms