RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 DIP2BQ9P265 1576 aa28.23■■■□□ 2.11
HDLBP-238ENST00000479894 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
HDLBP-238ENST00000479894 JPH4Q96JJ6 628 aa28.2■■■□□ 2.1
HDLBP-238ENST00000479894 KDM6BO15054 1643 aa28.18■■■□□ 2.1
HDLBP-238ENST00000479894 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
HDLBP-238ENST00000479894 NPM1P06748 294 aaKnown RBP eCLIP28.17■■■□□ 2.1
HDLBP-238ENST00000479894 RUSC2Q8N2Y8 1516 aa28.12■■■□□ 2.09
HDLBP-238ENST00000479894 ADCY10Q96PN6 1610 aa28.11■■■□□ 2.09
HDLBP-238ENST00000479894 ILDR1Q86SU0 546 aaPredicted RBP28.09■■■□□ 2.09
HDLBP-238ENST00000479894 TSPOAP1O95153 1857 aa28.08■■■□□ 2.09
HDLBP-238ENST00000479894 KIAA0586Q9BVV6 1533 aa27.88■■■□□ 2.05
HDLBP-238ENST00000479894 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
HDLBP-238ENST00000479894 GLI2P10070 1586 aa27.79■■■□□ 2.04
HDLBP-238ENST00000479894 ADGRL1O94910 1474 aa27.79■■■□□ 2.04
HDLBP-238ENST00000479894 CUL7Q14999 1698 aa27.75■■■□□ 2.03
HDLBP-238ENST00000479894 PTPRGP23470 1445 aa27.74■■■□□ 2.03
HDLBP-238ENST00000479894 ABCC2Q92887 1545 aa27.73■■■□□ 2.03
HDLBP-238ENST00000479894 PLB1Q6P1J6 1458 aa27.72■■■□□ 2.03
HDLBP-238ENST00000479894 HECW2Q9P2P5 1572 aa27.69■■■□□ 2.02
HDLBP-238ENST00000479894 ASXL2Q76L83 1435 aa27.68■■■□□ 2.02
HDLBP-238ENST00000479894 SUPT5HO00267 1087 aaKnown RBP27.68■■■□□ 2.02
HDLBP-238ENST00000479894 IGF1RP08069 1367 aa27.65■■■□□ 2.02
HDLBP-238ENST00000479894 TNIKQ9UKE5 1360 aa27.64■■■□□ 2.02
HDLBP-238ENST00000479894 UHRF1BP1LA0JNW5 1464 aa27.63■■■□□ 2.01
HDLBP-238ENST00000479894 CARMIL2Q6F5E8 1435 aa27.62■■■□□ 2.01
HDLBP-238ENST00000479894 MAP3K4Q9Y6R4 1608 aa27.61■■■□□ 2.01
HDLBP-238ENST00000479894 KIF27Q86VH2 1401 aa27.59■■■□□ 2.01
HDLBP-238ENST00000479894 COL17A1Q9UMD9 1497 aaPredicted RBP27.59■■■□□ 2.01
HDLBP-238ENST00000479894 TEX14Q8IWB6 1497 aa27.57■■■□□ 2
HDLBP-238ENST00000479894 EPRSP07814 1512 aaKnown RBP27.53■■■□□ 2
HDLBP-238ENST00000479894 UACAQ9BZF9 1416 aa27.52■■■□□ 2
HDLBP-238ENST00000479894 IQGAP2Q13576 1575 aa27.51■■□□□ 1.99
HDLBP-238ENST00000479894 TTBK1Q5TCY1 1321 aaPredicted RBP27.5■■□□□ 1.99
HDLBP-238ENST00000479894 KDM5BQ9UGL1 1544 aa27.5■■□□□ 1.99
HDLBP-238ENST00000479894 CARMIL1Q5VZK9 1371 aa27.47■■□□□ 1.99
HDLBP-238ENST00000479894 ZCCHC11Q5TAX3 1644 aaKnown RBP27.43■■□□□ 1.98
HDLBP-238ENST00000479894 DISP1Q96F81 1524 aa27.41■■□□□ 1.98
HDLBP-238ENST00000479894 FBXO41Q8TF61 875 aa27.34■■□□□ 1.97
HDLBP-238ENST00000479894 UGGT2Q9NYU1 1516 aa27.31■■□□□ 1.96
HDLBP-238ENST00000479894 WDR7Q9Y4E6 1490 aa27.31■■□□□ 1.96
HDLBP-238ENST00000479894 CFAP43Q8NDM7 1665 aa27.3■■□□□ 1.96
HDLBP-238ENST00000479894 MAGI3Q5TCQ9 1506 aa27.28■■□□□ 1.96
HDLBP-238ENST00000479894 KIAA0556O60303 1618 aa27.27■■□□□ 1.96
HDLBP-238ENST00000479894 KIF21BO75037 1637 aa27.21■■□□□ 1.95
HDLBP-238ENST00000479894 CD109Q6YHK3 1445 aa27.21■■□□□ 1.95
HDLBP-238ENST00000479894 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
HDLBP-238ENST00000479894 ARAP3Q8WWN8 1544 aa27.1■■□□□ 1.93
HDLBP-238ENST00000479894 ADAMTSL3P82987 1691 aa27.09■■□□□ 1.93
HDLBP-238ENST00000479894 ABCA8O94911 1581 aa27.07■■□□□ 1.92
HDLBP-238ENST00000479894 PTPRMP28827 1452 aa27.06■■□□□ 1.92
HDLBP-238ENST00000479894 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
HDLBP-238ENST00000479894 KCNH8Q96L42 1107 aa27.04■■□□□ 1.92
HDLBP-238ENST00000479894 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
HDLBP-238ENST00000479894 PHLDB1Q86UU1 1377 aa26.98■■□□□ 1.91
HDLBP-238ENST00000479894 PCF11O94913 1555 aaKnown RBP26.96■■□□□ 1.91
HDLBP-238ENST00000479894 BCORL1Q5H9F3 1711 aa26.95■■□□□ 1.9
HDLBP-238ENST00000479894 ABCA9Q8IUA7 1624 aa26.9■■□□□ 1.9
HDLBP-238ENST00000479894 LMTK3Q96Q04 1460 aa26.89■■□□□ 1.9
HDLBP-238ENST00000479894 MADDQ8WXG6 1647 aa26.87■■□□□ 1.89
HDLBP-238ENST00000479894 NEO1Q92859 1461 aa26.85■■□□□ 1.89
HDLBP-238ENST00000479894 ATP10BO94823 1461 aa26.81■■□□□ 1.88
HDLBP-238ENST00000479894 FRMPD1Q5SYB0 1578 aa26.79■■□□□ 1.88
HDLBP-238ENST00000479894 RAPGEF3O95398 923 aa26.78■■□□□ 1.88
HDLBP-238ENST00000479894 FAM9AQ8IZU1 332 aaPredicted RBP26.78■■□□□ 1.88
HDLBP-238ENST00000479894 RIMS1Q86UR5 1692 aaKnown RBP26.77■■□□□ 1.88
HDLBP-238ENST00000479894 ARID4BQ4LE39 1312 aaPredicted RBP26.74■■□□□ 1.87
HDLBP-238ENST00000479894 ARHGEF40Q8TER5 1519 aa26.72■■□□□ 1.87
HDLBP-238ENST00000479894 RICTORQ6R327 1708 aa26.68■■□□□ 1.86
HDLBP-238ENST00000479894 PRXQ9BXM0 1461 aa26.67■■□□□ 1.86
HDLBP-238ENST00000479894 CERKQ8TCT0 537 aa26.66■■□□□ 1.86
HDLBP-238ENST00000479894 ARID3CA6NKF2 412 aa26.65■■□□□ 1.86
HDLBP-238ENST00000479894 RAPGEF6Q8TEU7 1601 aa26.63■■□□□ 1.85
HDLBP-238ENST00000479894 POGZQ7Z3K3 1410 aa26.62■■□□□ 1.85
HDLBP-238ENST00000479894 HSPA2P54652 639 aa26.61■■□□□ 1.85
HDLBP-238ENST00000479894 DENND4BO75064 1496 aaPredicted RBP26.61■■□□□ 1.85
HDLBP-238ENST00000479894 FANCAO15360 1455 aa26.6■■□□□ 1.85
HDLBP-238ENST00000479894 FHOD3Q2V2M9 1422 aa26.59■■□□□ 1.85
HDLBP-238ENST00000479894 CFAP74Q9C0B2 1584 aa26.58■■□□□ 1.85
HDLBP-238ENST00000479894 SAMD9Q5K651 1589 aa26.58■■□□□ 1.85
HDLBP-238ENST00000479894 ZMYM4Q5VZL5 1548 aa26.56■■□□□ 1.84
HDLBP-238ENST00000479894 AKNAQ7Z591 1439 aa26.56■■□□□ 1.84
HDLBP-238ENST00000479894 FER1L4A9Z1Z3 1794 aa26.54■■□□□ 1.84
HDLBP-238ENST00000479894 SOCS7O14512 581 aa26.54■■□□□ 1.84
HDLBP-238ENST00000479894 P3H3Q8IVL6 736 aa26.54■■□□□ 1.84
HDLBP-238ENST00000479894 EFCAB5A4FU69 1503 aa26.53■■□□□ 1.84
HDLBP-238ENST00000479894 TTC37Q6PGP7 1564 aa26.52■■□□□ 1.84
HDLBP-238ENST00000479894 SIGLEC1Q9BZZ2 1709 aa26.52■■□□□ 1.84
HDLBP-238ENST00000479894 ZFYVE16Q7Z3T8 1539 aa26.5■■□□□ 1.83
HDLBP-238ENST00000479894 MAGI2Q86UL8 1455 aa26.5■■□□□ 1.83
HDLBP-238ENST00000479894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.5■■□□□ 1.83
HDLBP-238ENST00000479894 HNRNPUL2Q1KMD3 747 aaKnown RBP26.5■■□□□ 1.83
HDLBP-238ENST00000479894 DISP3Q9P2K9 1392 aa26.49■■□□□ 1.83
HDLBP-238ENST00000479894 NUP153P49790 1475 aaKnown RBP26.49■■□□□ 1.83
HDLBP-238ENST00000479894 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
HDLBP-238ENST00000479894 PREX1Q8TCU6 1659 aa26.47■■□□□ 1.83
HDLBP-238ENST00000479894 PLPPR3Q6T4P5 718 aa26.44■■□□□ 1.82
HDLBP-238ENST00000479894 YEATS2Q9ULM3 1422 aa26.42■■□□□ 1.82
HDLBP-238ENST00000479894 PLEKHD1A6NEE1 506 aa26.42■■□□□ 1.82
HDLBP-238ENST00000479894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.42■■□□□ 1.82
HDLBP-238ENST00000479894 SETD1BQ9UPS6 1966 aaKnown RBP26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms